BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00028039
         (382 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251395.1| DNA-directed RNA polymerase 3B, chloroplasti...   133   2e-33
ref|XP_020594687.1| DNA-directed RNA polymerase 3, chloroplastic...    63   3e-09
ref|XP_020597755.1| DNA-directed RNA polymerase 3, chloroplastic...    63   6e-09

>ref|XP_020251395.1| DNA-directed RNA polymerase 3B, chloroplastic-like [Asparagus
           officinalis]
          Length = 989

 Score =  133 bits (334), Expect = 2e-33
 Identities = 64/106 (60%), Positives = 76/106 (71%), Gaps = 2/106 (1%)
 Frame = +3

Query: 69  WKPQKSPIKPRKTLIPPIPKRVTLISLRSSPFPLGSDPS--EADNKFPVAFSHLAPLQSP 242
           WKP K   K +KT   P+P+ + L SLR SPFPLGSDP   E DNKFP+ FSHL PLQSP
Sbjct: 46  WKPNKIHRKSKKTPFHPVPRFLPLNSLRHSPFPLGSDPHPPEPDNKFPITFSHLTPLQSP 105

Query: 243 LLLDPAANLSPSIQFQWTEPLNFAFLEDPIQISPIPPPEDDGSARK 380
           + LDP A+L  S+Q QWT+PLNF FLEDP++I P P PE + S RK
Sbjct: 106 VALDPVAHLKQSLQIQWTQPLNFTFLEDPVRILPNPSPEPEESRRK 151


>ref|XP_020594687.1| DNA-directed RNA polymerase 3, chloroplastic-like, partial
           [Phalaenopsis equestris]
          Length = 272

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 31/58 (53%), Positives = 36/58 (62%)
 Frame = +3

Query: 120 IPKRVTLISLRSSPFPLGSDPSEADNKFPVAFSHLAPLQSPLLLDPAANLSPSIQFQW 293
           IP  V L SL SSPFPLGSD  E + KFP AFSH+  L+SP++ DP       I F W
Sbjct: 49  IPSFVALNSLDSSPFPLGSDSLEPELKFPTAFSHMKTLESPVIYDPVVLQDERIDFPW 106


>ref|XP_020597755.1| DNA-directed RNA polymerase 3, chloroplastic-like [Phalaenopsis
           equestris]
          Length = 985

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 31/58 (53%), Positives = 36/58 (62%)
 Frame = +3

Query: 120 IPKRVTLISLRSSPFPLGSDPSEADNKFPVAFSHLAPLQSPLLLDPAANLSPSIQFQW 293
           IP  V L SL SSPFPLGSD  E + KFP AFSH+  L+SP++ DP       I F W
Sbjct: 49  IPSFVALNSLDSSPFPLGSDSLEPELKFPTAFSHMKTLESPVIYDPVVLQDERIDFPW 106