BLASTX nr result

ID: Ophiopogon26_contig00028022 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00028022
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022541750.1| proline-rich 33 kDa extensin-related protein...    55   3e-06

>ref|XP_022541750.1| proline-rich 33 kDa extensin-related protein-like, partial
           [Astyanax mexicanus]
          Length = 321

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 47/141 (33%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
 Frame = -1

Query: 404 ITNHH------HNPLQHPTLPTFPNNDNHPRQHPATHKNANTLH--C*HITR---QHHIH 258
           IT HH      H P +HPT  T P+   H   HP+ H + +T+H    H T    QHH+ 
Sbjct: 88  ITQHHPSSHTIHQPFRHPTPSTRPSVTLH---HPSDHTSPHTIHQPIHHPTTSVSQHHLS 144

Query: 257 DSTIIHPMPHVQQFHHTNTYIITYPC--------TISFLTQHPAHPRHHLIKMHTTSPVT 102
            +TI HP P +   HH +   I YP           S     PAHP  + I   T  P  
Sbjct: 145 PNTIHHPTPSITP-HHPSPNTIHYPTPSTSPSVRPSSTPNHSPAHPSPNTICDPT--PPV 201

Query: 101 TSYIQFPN--HAPKTTITNNN 45
           T +   PN    P ++IT +N
Sbjct: 202 TQHHSSPNTIRHPTSSITQHN 222


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