BLASTX nr result

ID: Ophiopogon26_contig00028005 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00028005
         (495 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274155.1| pumilio homolog 23 isoform X1 [Asparagus off...    65   4e-09

>ref|XP_020274155.1| pumilio homolog 23 isoform X1 [Asparagus officinalis]
 ref|XP_020274156.1| pumilio homolog 23 isoform X2 [Asparagus officinalis]
 gb|ONK65403.1| uncharacterized protein A4U43_C07F36740 [Asparagus officinalis]
          Length = 785

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 35/75 (46%), Positives = 43/75 (57%)
 Frame = -3

Query: 226 SKKPEKGNDRNLDTEESLYKQHGTMKKNKEFKKQHRGTGKDGQSKKTKAHMHAKSKDVTK 47
           +K   K    N D E S  +  G   K   F KQ RG G+D +SKK K+   AK  D ++
Sbjct: 4   AKNRNKKRRTNFDEENSSKQGRGKSSKGNRFNKQRRGGGRDLESKKMKSPTPAKPGDSSR 63

Query: 46  QKITLRKNVDPETAK 2
           Q+ITLRK VDPETAK
Sbjct: 64  QQITLRKRVDPETAK 78


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