BLASTX nr result

ID: Ophiopogon26_contig00027641 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00027641
         (402 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020242262.1| uncharacterized protein LOC109820518 [Aspara...    60   5e-08

>ref|XP_020242262.1| uncharacterized protein LOC109820518 [Asparagus officinalis]
 ref|XP_020242263.1| uncharacterized protein LOC109820518 [Asparagus officinalis]
 ref|XP_020242264.1| uncharacterized protein LOC109820518 [Asparagus officinalis]
 gb|ONK60511.1| uncharacterized protein A4U43_C08F19260 [Asparagus officinalis]
          Length = 277

 Score = 59.7 bits (143), Expect(2) = 5e-08
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = +1

Query: 223 REFINGRVNAYALCCADESLMKEFIDMNNSGNEIEGMET 339
           +EFIN  VNAYAL C DE L KE +DM NSG E+EGMET
Sbjct: 122 KEFINAGVNAYALGCTDEGLRKELLDMKNSGTEVEGMET 160



 Score = 25.0 bits (53), Expect(2) = 5e-08
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 327 GDGNFSGGTSLRFKFLSEK 383
           G   + GGTSLRF+ LS++
Sbjct: 157 GMETYGGGTSLRFRILSDE 175


Top