BLASTX nr result

ID: Ophiopogon26_contig00027628 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00027628
         (489 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010905690.1| PREDICTED: uncharacterized protein LOC105032...    48   3e-07
ref|XP_020273270.1| chromodomain-helicase-DNA-binding protein 5-...    44   6e-07

>ref|XP_010905690.1| PREDICTED: uncharacterized protein LOC105032814 [Elaeis guineensis]
          Length = 793

 Score = 47.8 bits (112), Expect(2) = 3e-07
 Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
 Frame = +1

Query: 319 TTRGRSSTMVDSDSELFNFDDVISEEELVRDLRIGWGL-------ILTLRKGEGKGTEKQ 477
           T R RS + V S+SE  + D VISEEEL RDL +G  L       I   RKGE KG EK+
Sbjct: 305 TRRKRSPSSVGSESESSDCDYVISEEEL-RDLGVGGVLSQPQSERIFARRKGEEKGKEKE 363

Query: 478 ADDS 489
           AD+S
Sbjct: 364 ADES 367



 Score = 34.3 bits (77), Expect(2) = 3e-07
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +2

Query: 230 DEFVVKEDVLVDKQRNKSKKARKRRIEP 313
           D+FV K+ + +D +RNKSKK RK+   P
Sbjct: 276 DDFVEKDRIALDNRRNKSKKGRKKTAAP 303


>ref|XP_020273270.1| chromodomain-helicase-DNA-binding protein 5-like [Asparagus
           officinalis]
 gb|ONK63284.1| uncharacterized protein A4U43_C07F13380 [Asparagus officinalis]
          Length = 846

 Score = 43.5 bits (101), Expect(2) = 6e-07
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
 Frame = +1

Query: 319 TTRGRSSTMVDSDSELFNFDDVISEEELVRDLRIGWGLIL--------TLRKGEGKGTEK 474
           T R RS+++VDSDSE  + D++  EEE V DLR G GL++          +K E KG E+
Sbjct: 375 TKRKRSNSLVDSDSESLDVDEMTLEEE-VMDLRRG-GLLMIEQPKRVTATKKAEEKGKER 432

Query: 475 QADDS 489
           Q D S
Sbjct: 433 QVDSS 437



 Score = 37.4 bits (85), Expect(2) = 6e-07
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = +2

Query: 230 DEFVVKEDVLVDKQRNKSKKARKRRIEP 313
           DEF+++++ L+DK+RN+SKK R +R  P
Sbjct: 346 DEFLIEDEFLIDKERNQSKKTRGKRTGP 373


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