BLASTX nr result
ID: Ophiopogon26_contig00027370
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00027370
(423 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 79 3e-25
emb|CDP17738.1| unnamed protein product [Coffea canephora] 86 1e-24
emb|CDP17739.1| unnamed protein product [Coffea canephora] 84 3e-23
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 81 5e-22
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar... 82 3e-21
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 75 7e-21
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus... 96 4e-20
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro... 73 1e-19
gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna ... 67 2e-18
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 72 2e-18
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo... 66 5e-18
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo... 66 5e-18
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo... 66 5e-18
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo... 66 5e-18
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo... 66 5e-18
gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposo... 64 5e-18
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 69 8e-18
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 66 1e-17
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 77 1e-17
emb|CAN71161.1| hypothetical protein VITISV_009113 [Vitis vinifera] 76 4e-17
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 79.3 bits (194), Expect(2) = 3e-25
Identities = 40/86 (46%), Positives = 55/86 (63%)
Frame = -2
Query: 422 KHASLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNA 243
K ASL G ++V+FVDD SR +WV M KDEVL +F KWKK +E+QTGRKI DN
Sbjct: 277 KTASLAGNHYYVTFVDDFSRRIWVYAMKTKDEVLGIFLKWKKRMETQTGRKIKHFRTDNG 336
Query: 242 GKEKYSEDLFQELCLSENVYRGTSIE 165
G +Y+ D F++ C + R +++
Sbjct: 337 G--EYTSDPFKKACEESGIVRHFTVK 360
Score = 63.5 bits (153), Expect(2) = 3e-25
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = -1
Query: 186 IQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLLSAA 7
I RHF + T Q +MNRTLLE V+C++ GL K FW +A++YA H INRL S+A
Sbjct: 353 IVRHFTVKHTPQQNGVAERMNRTLLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSSA 412
Query: 6 CG 1
G
Sbjct: 413 IG 414
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 85.5 bits (210), Expect(2) = 1e-24
Identities = 43/81 (53%), Positives = 55/81 (67%)
Frame = -2
Query: 422 KHASLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNA 243
K SLGG +FV+F+DD SR VWV TM KDE+L++F KWK VE+QTGRKI +L DN
Sbjct: 514 KTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKARVENQTGRKIKILRTDNG 573
Query: 242 GKEKYSEDLFQELCLSENVYR 180
G +Y D FQ++C + R
Sbjct: 574 G--EYKSDPFQKICQECGIVR 592
Score = 55.5 bits (132), Expect(2) = 1e-24
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = -1
Query: 195 REC-IQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRL 19
+EC I RHF + Q MN+TL+E V+C++ GL + FW +A+ YA H +NRL
Sbjct: 586 QECGIVRHFIVRKIPQQNGVSEHMNKTLVEKVRCMLSNAGLGRKFWAEAVTYAQHLVNRL 645
Query: 18 LSAACG 1
S+A G
Sbjct: 646 PSSAIG 651
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 84.3 bits (207), Expect(2) = 3e-23
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = -2
Query: 422 KHASLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNA 243
K SLGG +FV+F+DD SR VWV TM KDEVLE+F KWK VE+QTGRKI +L DN
Sbjct: 122 KTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKARVENQTGRKIKILRTDNG 181
Query: 242 GKEKYSEDLFQEL 204
G +Y D FQ++
Sbjct: 182 G--EYKSDPFQKI 192
Score = 52.0 bits (123), Expect(2) = 3e-23
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = -1
Query: 195 REC-IQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRL 19
+EC I +HF +T Q +MN+TL+E V C++ L + FW + + YA H +NRL
Sbjct: 194 QECGIVQHFTVRKTPQQNGVSERMNKTLVEKVHCMLSNARLGRKFWAETVTYAQHLVNRL 253
Query: 18 LSAACG 1
S+A G
Sbjct: 254 PSSAIG 259
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 81.3 bits (199), Expect(2) = 5e-22
Identities = 42/87 (48%), Positives = 55/87 (63%)
Frame = -2
Query: 422 KHASLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNA 243
K S+GG +FV+FVDD SR VWV TM K++VLE+F KWK VE+ TGRKI VL DN
Sbjct: 428 KTPSIGGRHYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKWKAEVENHTGRKIKVLQTDNG 487
Query: 242 GKEKYSEDLFQELCLSENVYRGTSIER 162
G +Y D F +C + R ++ +
Sbjct: 488 G--EYKSDPFLNVCQDCGIVRHFTVRK 512
Score = 50.8 bits (120), Expect(2) = 5e-22
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = -1
Query: 186 IQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLLSAA 7
I RHF +T Q +MN+TL+E V C++ L + FW +A+ YA H +NRL S+A
Sbjct: 504 IVRHFTVRKTPQQNGVSERMNKTLVEKVCCMLSNAELGREFWAEAVTYAQHLVNRLPSSA 563
>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
Length = 1034
Score = 82.0 bits (201), Expect(2) = 3e-21
Identities = 43/81 (53%), Positives = 53/81 (65%)
Frame = -2
Query: 422 KHASLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNA 243
K ASLGG +FV+FVDD SR VWV M RK+EVL+VF KWKK VE+Q RK+ L DN
Sbjct: 341 KVASLGGMHYFVTFVDDYSRKVWVYLMKRKNEVLDVFLKWKKMVETQADRKVKRLRSDNG 400
Query: 242 GKEKYSEDLFQELCLSENVYR 180
+Y D F ++C E + R
Sbjct: 401 --TEYKNDPFLQVCHDEGIVR 419
Score = 47.4 bits (111), Expect(2) = 3e-21
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1
Query: 192 ECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLY 43
E I RHF +T Q +MNRT+LE V+C++ GL K FW +A+ Y
Sbjct: 415 EGIVRHFTVRDTPQQNGVAERMNRTILEKVRCMLSNAGLGKEFWAEAVTY 464
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 75.1 bits (183), Expect(2) = 7e-21
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = -2
Query: 422 KHASLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNA 243
+ AS+GG R+FV+F DD SR +WV M +K EV FK WK VE+QTGRKI L DN
Sbjct: 412 REASMGGSRYFVTFTDDFSRKLWVYFMKQKSEVFSKFKLWKAEVENQTGRKIKYLRSDNG 471
Query: 242 GKEKYSEDLFQELCLSENVYRGTSIER 162
+Y+ F++ C + R S+ +
Sbjct: 472 --TEYTNSQFEKFCEQHGIQRHFSVRK 496
Score = 53.1 bits (126), Expect(2) = 7e-21
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -1
Query: 186 IQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINR 22
IQRHF +T Q +MN +L E +CL L+ GLSK FW + + AC+ INR
Sbjct: 488 IQRHFSVRKTPQQNGVAERMNMSLTERARCLQLKAGLSKGFWAETINMACYLINR 542
>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
Length = 631
Score = 95.5 bits (236), Expect = 4e-20
Identities = 46/81 (56%), Positives = 58/81 (71%)
Frame = -2
Query: 422 KHASLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNA 243
K+ SLGG WFV+FVDD SRH WV TM++K EVL++F +WKK +E QTGRKI L DN
Sbjct: 442 KNVSLGGQHWFVTFVDDYSRHCWVYTMTKKSEVLDIFVEWKKRLELQTGRKIKTLRSDNG 501
Query: 242 GKEKYSEDLFQELCLSENVYR 180
G +Y+ D FQ+LC E + R
Sbjct: 502 G--EYTSDPFQQLCRDEGIER 520
>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
Length = 1309
Score = 72.8 bits (177), Expect(2) = 1e-19
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = -2
Query: 416 ASLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGK 237
AS GG R+++S +DD SR +WV T+ KDE + FK WK VE+QTG+KI L DN
Sbjct: 485 ASRGGARYYISVIDDYSRKLWVVTLKSKDEAFKAFKDWKMMVETQTGKKIKKLRTDNG-- 542
Query: 236 EKYSEDLFQELCLSENVYR 180
+Y F++ C E + R
Sbjct: 543 LEYCSTEFKDFCKQEGIVR 561
Score = 51.2 bits (121), Expect(2) = 1e-19
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = -1
Query: 195 RECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLL 16
+E I RH+ T Q +MNRT+LE V+C++ +GL + FW +A++ A + INR
Sbjct: 556 QEGIVRHYTVPNTPQQNGLAERMNRTILERVRCMLADSGLPRMFWAEAVVTASYLINRCP 615
Query: 15 SAA 7
S A
Sbjct: 616 STA 618
>gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna angularis]
Length = 473
Score = 66.6 bits (161), Expect(2) = 2e-18
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = -2
Query: 413 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGKE 234
S+GG ++FVSF+DD SR +WV + +K +V VFK++K VE +TG+ I L DN G
Sbjct: 108 SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELETGKMIKCLRTDNGG-- 165
Query: 233 KYSEDLFQELCLSENVYR 180
+Y++ F C E + R
Sbjct: 166 EYTDGDFLAFCKQEGIKR 183
Score = 53.5 bits (127), Expect(2) = 2e-18
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = -1
Query: 195 RECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLL 16
+E I+R F T Q +MNRTLLE + ++ GL+KSFW +A+ AC+ INR
Sbjct: 178 QEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTTGLAKSFWAEAVKTACYLINRSP 237
Query: 15 SAACG 1
S A G
Sbjct: 238 STAIG 242
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 72.4 bits (176), Expect(2) = 2e-18
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = -2
Query: 413 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGKE 234
SLGGCR+FVS +DD SR WV M K E + FK+WK +E+QTG+KI L DN +
Sbjct: 485 SLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEF 544
Query: 233 KYSEDLFQELCLSENVYRGTSI 168
+SE F + C E + R ++
Sbjct: 545 CWSE--FDQFCKDEGIARHRTV 564
Score = 47.4 bits (111), Expect(2) = 2e-18
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = -1
Query: 192 ECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINR 22
E I RH T Q +MN+TLLE +C++ GL + FW +A+ AC+ INR
Sbjct: 556 EGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINR 612
>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 65.9 bits (159), Expect(2) = 5e-18
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = -2
Query: 413 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGKE 234
S+GG ++FVSF+DD SR +WV + +K +V VFK++K VE TG++I L DN G
Sbjct: 495 SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGG-- 552
Query: 233 KYSEDLFQELCLSENVYR 180
+Y + F C E + R
Sbjct: 553 EYIDGDFLAFCKQEGIKR 570
Score = 52.8 bits (125), Expect(2) = 5e-18
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = -1
Query: 195 RECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLL 16
+E I+R F T Q +MNRTLLE + ++ GL+KSFW +A+ AC+ INR
Sbjct: 565 QEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSP 624
Query: 15 SAACG 1
S A G
Sbjct: 625 STAIG 629
>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 65.9 bits (159), Expect(2) = 5e-18
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = -2
Query: 413 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGKE 234
S+GG ++FVSF+DD SR +WV + +K +V VFK++K VE TG++I L DN G
Sbjct: 495 SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGG-- 552
Query: 233 KYSEDLFQELCLSENVYR 180
+Y + F C E + R
Sbjct: 553 EYIDGDFLAFCKQEGIKR 570
Score = 52.8 bits (125), Expect(2) = 5e-18
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = -1
Query: 195 RECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLL 16
+E I+R F T Q +MNRTLLE + ++ GL+KSFW +A+ AC+ INR
Sbjct: 565 QEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSP 624
Query: 15 SAACG 1
S A G
Sbjct: 625 STAIG 629
>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 65.9 bits (159), Expect(2) = 5e-18
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = -2
Query: 413 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGKE 234
S+GG ++FVSF+DD SR +WV + +K +V VFK++K VE TG++I L DN G
Sbjct: 446 SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGG-- 503
Query: 233 KYSEDLFQELCLSENVYR 180
+Y + F C E + R
Sbjct: 504 EYIDGDFLAFCKQEGIKR 521
Score = 52.8 bits (125), Expect(2) = 5e-18
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = -1
Query: 195 RECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLL 16
+E I+R F T Q +MNRTLLE + ++ GL+KSFW +A+ AC+ INR
Sbjct: 516 QEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSP 575
Query: 15 SAACG 1
S A G
Sbjct: 576 STAIG 580
>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 65.9 bits (159), Expect(2) = 5e-18
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = -2
Query: 413 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGKE 234
S+GG ++FVSF+DD SR +WV + +K +V VFK++K VE TG++I L DN G
Sbjct: 446 SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGG-- 503
Query: 233 KYSEDLFQELCLSENVYR 180
+Y + F C E + R
Sbjct: 504 EYIDGDFLAFCKQEGIKR 521
Score = 52.8 bits (125), Expect(2) = 5e-18
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = -1
Query: 195 RECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLL 16
+E I+R F T Q +MNRTLLE + ++ GL+KSFW +A+ AC+ INR
Sbjct: 516 QEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSP 575
Query: 15 SAACG 1
S A G
Sbjct: 576 STAIG 580
>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 65.9 bits (159), Expect(2) = 5e-18
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = -2
Query: 413 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGKE 234
S+GG ++FVSF+DD SR +WV + +K +V VFK++K VE TG++I L DN G
Sbjct: 446 SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGG-- 503
Query: 233 KYSEDLFQELCLSENVYR 180
+Y + F C E + R
Sbjct: 504 EYIDGDFLAFCKQEGIKR 521
Score = 52.8 bits (125), Expect(2) = 5e-18
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = -1
Query: 195 RECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLL 16
+E I+R F T Q +MNRTLLE + ++ GL+KSFW +A+ AC+ INR
Sbjct: 516 QEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSP 575
Query: 15 SAACG 1
S A G
Sbjct: 576 STAIG 580
>gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 993
Score = 63.9 bits (154), Expect(2) = 5e-18
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = -2
Query: 416 ASLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGK 237
A+ GG R+F+SF+DD SR VW+ + KDE F +WK VE+Q RK+ VL DN
Sbjct: 433 ATHGGNRYFLSFIDDYSRKVWIFLLKSKDETFSKFLEWKSMVENQKNRKLKVLRTDNG-- 490
Query: 236 EKYSEDLFQELCLSENVYRGTSI 168
++ + F + C + R ++
Sbjct: 491 LEFCNESFNKFCSDSGIVRHKTV 513
Score = 54.7 bits (130), Expect(2) = 5e-18
Identities = 28/60 (46%), Positives = 37/60 (61%)
Frame = -1
Query: 186 IQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLLSAA 7
I RH T Q +MNRTLL+ V+CL+ +GLSK FW +AL AC+ +NR S+A
Sbjct: 507 IVRHKTVSHTPQQNGLAERMNRTLLDRVRCLLFSSGLSKFFWGEALSTACYLVNRTPSSA 566
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 69.3 bits (168), Expect(2) = 8e-18
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = -2
Query: 413 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGKE 234
SLGG R+FVSF+DD SR +WV + +K +V VFK +K +E +TG+KI L DN G
Sbjct: 496 SLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGG-- 553
Query: 233 KYSEDLFQELCLSENVYR 180
+Y + F C E + R
Sbjct: 554 EYVDGEFLAFCKQEGIVR 571
Score = 48.5 bits (114), Expect(2) = 8e-18
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = -1
Query: 195 RECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLL 16
+E I R F T Q +MNRTLLE + ++ G++KSFW +A+ AC+ INR
Sbjct: 566 QEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSP 625
Query: 15 SAA 7
S A
Sbjct: 626 STA 628
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 66.2 bits (160), Expect(2) = 1e-17
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = -2
Query: 413 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGKE 234
S+GG ++FVSF+DD SR +WV + +K V VFK++K VE +TG++I L DN G
Sbjct: 496 SIGGAKYFVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGG-- 553
Query: 233 KYSEDLFQELCLSENVYR 180
+Y++ F C E + R
Sbjct: 554 EYTDGDFLAFCKQEGITR 571
Score = 50.8 bits (120), Expect(2) = 1e-17
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = -1
Query: 195 RECIQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLL 16
+E I R F T Q +MNRTLLE + ++ GL+KSFW +A AC+ INR
Sbjct: 566 QEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSP 625
Query: 15 SAACG 1
S A G
Sbjct: 626 STAIG 630
>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1166
Score = 77.0 bits (188), Expect(2) = 1e-17
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = -2
Query: 413 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGKE 234
SLGGCR+FVSF+DD S+ VWV + KDE F++WK+ VE+QTG+KI L DN G E
Sbjct: 396 SLGGCRYFVSFIDDFSKKVWVYFLKTKDEAYHKFREWKQAVENQTGKKIKYLRTDN-GLE 454
Query: 233 KYSEDLFQELCLSENVYR 180
Y+ F LC + + R
Sbjct: 455 FYNTQ-FDNLCKEDGIKR 471
Score = 40.0 bits (92), Expect(2) = 1e-17
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = -1
Query: 186 IQRHFYREETSGQLDGVAKMNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINRLLSAA 7
I+RH T Q +MN+T++++V+ ++ + G+S+ FW +A A + INR ++
Sbjct: 469 IKRHRTCTYTPQQNGVSERMNKTIMDIVRSMLAETGMSQEFWAEATSTAVYLINRTPNSF 528
Query: 6 CG 1
G
Sbjct: 529 IG 530
>emb|CAN71161.1| hypothetical protein VITISV_009113 [Vitis vinifera]
Length = 1141
Score = 75.9 bits (185), Expect(2) = 4e-17
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = -2
Query: 416 ASLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWKKCVESQTGRKIMVL*FDNAGK 237
ASLGG R++++F+DD SR VWV + K +V E FKKWK VE++TG K+ L DN G
Sbjct: 421 ASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFETFKKWKAMVETETGLKVKCLRSDNGG- 479
Query: 236 EKYSEDLFQELCLSENV 186
+Y + F E C ++ +
Sbjct: 480 -EYIDGGFSEYCAAQGI 495
Score = 39.7 bits (91), Expect(2) = 4e-17
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -1
Query: 150 QLDGVAK-MNRTLLEMVQCLMLQNGLSKSFWTDALLYACHFINR 22
Q +GVA+ MNRTL E + + L GL K FW DA A + INR
Sbjct: 506 QQNGVAEXMNRTLNEXARSMRLHAGLPKXFWADAXSTAXYLINR 549