BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00027096
         (683 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009334344.1| clp protease proteolytic subunit (chloroplas...    48   4e-09

>ref|YP_009334344.1| clp protease proteolytic subunit (chloroplast) [Agave attenuata]
 gb|APO11154.1| clp protease proteolytic subunit (chloroplast) [Agave attenuata]
          Length = 257

 Score = 48.1 bits (113), Expect(3) = 4e-09
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +1

Query: 502 KKCHCRAVCNAQKMPVRLFHSIC 570
           +K HCRAVCNAQKMPVRLF+SIC
Sbjct: 121 RKFHCRAVCNAQKMPVRLFNSIC 143



 Score = 35.8 bits (81), Expect(3) = 4e-09
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 606 AQSCKIEEPFMHDVIS 653
           AQSC+IEEPFMHDVIS
Sbjct: 156 AQSCEIEEPFMHDVIS 171



 Score = 24.6 bits (52), Expect(3) = 4e-09
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +2

Query: 653 NIIRVMIHQP 682
           NIIRVMIHQP
Sbjct: 172 NIIRVMIHQP 181