BLASTX nr result

ID: Ophiopogon26_contig00027063 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00027063
         (400 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020263408.1| uncharacterized protein LOC109839394 [Aspara...    79   9e-15
ref|XP_010919290.2| PREDICTED: LOW QUALITY PROTEIN: dof zinc fin...    75   2e-13
ref|XP_010933842.1| PREDICTED: dof zinc finger protein DOF4.6-li...    66   4e-10
ref|XP_010933841.1| PREDICTED: dof zinc finger protein DOF4.6-li...    66   4e-10
gb|ONK73670.1| uncharacterized protein A4U43_C04F34050 [Asparagu...    55   2e-06

>ref|XP_020263408.1| uncharacterized protein LOC109839394 [Asparagus officinalis]
          Length = 315

 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 42/78 (53%), Positives = 47/78 (60%)
 Frame = -3

Query: 236 KNPKFQEGQDLNLAFPAMPEFGACXXXXXXXXXNLSAMELLRSTGMQQGVRGPLNPFMPM 57
           +NP      DLNLAFP +PEF  C           SAMELLR  G+        +PFMPM
Sbjct: 177 QNPNPNHNHDLNLAFPILPEFPPCTNAGT------SAMELLRGRGLNPTPNP--SPFMPM 228

Query: 56  HPMAMPEYPSGFGVQDFR 3
           HPM +PEYPSGFGVQDFR
Sbjct: 229 HPMPIPEYPSGFGVQDFR 246


>ref|XP_010919290.2| PREDICTED: LOW QUALITY PROTEIN: dof zinc finger protein DOF4.6-like
           [Elaeis guineensis]
          Length = 323

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 66/159 (41%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
 Frame = -3

Query: 398 NVPVGGGSRKNKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------ 237
           NVPVGGGSRKNKR                                               
Sbjct: 92  NVPVGGGSRKNKRSXLLLSTTSASASATSSTVTATASAVSTSRKLPPELTATPISLSTSS 151

Query: 236 KNPKFQEGQDLNLAFP--AMPEF-----------------GACXXXXXXXXXNLSAMELL 114
           +NPKF EGQDLNLAFP  ++PEF                 G            LSAMELL
Sbjct: 152 QNPKFHEGQDLNLAFPHHSLPEFNDFPHLESSTNNKTSSSGNSGNNPCTAVGALSAMELL 211

Query: 113 RSTGMQQGVRGPLNPFMPMHPMAMPEYPSGFGV--QDFR 3
           RS GM  G RG L PFMPM PM MPEYP+GFGV  Q+FR
Sbjct: 212 RS-GM--GARG-LGPFMPM-PMPMPEYPAGFGVGLQEFR 245


>ref|XP_010933842.1| PREDICTED: dof zinc finger protein DOF4.6-like isoform X2 [Elaeis
           guineensis]
          Length = 323

 Score = 66.2 bits (160), Expect = 4e-10
 Identities = 61/160 (38%), Positives = 67/160 (41%), Gaps = 28/160 (17%)
 Frame = -3

Query: 398 NVPVGGGSRKNKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------ 237
           NVPVGGGSRKNKR                                               
Sbjct: 85  NVPVGGGSRKNKRSTTSSTAGPTSTATTTTSTITAAASTVSTSRKLPPELSPTPMSLSTS 144

Query: 236 -KNPKFQEGQDLNLAFP--AMPEF-----------------GACXXXXXXXXXNLSAMEL 117
            +NPKF EGQDLNLAFP  ++PEF                              LSAMEL
Sbjct: 145 SQNPKFHEGQDLNLAFPHHSLPEFNDFPNLESSSNNNNNNSSNSGSNPCTAVGALSAMEL 204

Query: 116 LRSTGMQQGVRGPLNPFMPMHPMAMPEYPSGFGV--QDFR 3
           LRS GM  G RG L PFM   PM MP+YP+GFGV  Q+FR
Sbjct: 205 LRS-GM--GARG-LGPFM---PMPMPDYPAGFGVGLQEFR 237


>ref|XP_010933841.1| PREDICTED: dof zinc finger protein DOF4.6-like isoform X1 [Elaeis
           guineensis]
          Length = 326

 Score = 66.2 bits (160), Expect = 4e-10
 Identities = 61/160 (38%), Positives = 67/160 (41%), Gaps = 28/160 (17%)
 Frame = -3

Query: 398 NVPVGGGSRKNKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------ 237
           NVPVGGGSRKNKR                                               
Sbjct: 88  NVPVGGGSRKNKRSTTSSTAGPTSTATTTTSTITAAASTVSTSRKLPPELSPTPMSLSTS 147

Query: 236 -KNPKFQEGQDLNLAFP--AMPEF-----------------GACXXXXXXXXXNLSAMEL 117
            +NPKF EGQDLNLAFP  ++PEF                              LSAMEL
Sbjct: 148 SQNPKFHEGQDLNLAFPHHSLPEFNDFPNLESSSNNNNNNSSNSGSNPCTAVGALSAMEL 207

Query: 116 LRSTGMQQGVRGPLNPFMPMHPMAMPEYPSGFGV--QDFR 3
           LRS GM  G RG L PFM   PM MP+YP+GFGV  Q+FR
Sbjct: 208 LRS-GM--GARG-LGPFM---PMPMPDYPAGFGVGLQEFR 240


>gb|ONK73670.1| uncharacterized protein A4U43_C04F34050 [Asparagus officinalis]
          Length = 228

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 31/67 (46%), Positives = 36/67 (53%)
 Frame = -3

Query: 236 KNPKFQEGQDLNLAFPAMPEFGACXXXXXXXXXNLSAMELLRSTGMQQGVRGPLNPFMPM 57
           +NP      DLNLAFP +PEF  C           SAMELLR  G+        +PFMPM
Sbjct: 110 QNPNPNHNHDLNLAFPILPEFPPC------TNAGTSAMELLRGRGLNPTPNP--SPFMPM 161

Query: 56  HPMAMPE 36
           HPM +PE
Sbjct: 162 HPMPIPE 168


Top