BLASTX nr result

ID: Ophiopogon26_contig00027035 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00027035
         (366 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAV92602.1| LRAT domain-containing protein [Cephalotus folli...    55   1e-06
dbj|GAV89192.1| LRAT domain-containing protein [Cephalotus folli...    54   5e-06
dbj|GAV74185.1| LRAT domain-containing protein [Cephalotus folli...    53   9e-06

>dbj|GAV92602.1| LRAT domain-containing protein [Cephalotus follicularis]
          Length = 200

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 4/45 (8%)
 Frame = +3

Query: 6   NNCEHFATFCRTGRRFSGQIFIKY----PHLKQLPTLERENMAAG 128
           NNCEHFATFC+TGR+FSGQ+  K      +L++LP  E E +AAG
Sbjct: 155 NNCEHFATFCKTGRKFSGQVMAKRVAPGVNLEELPIEELEKIAAG 199


>dbj|GAV89192.1| LRAT domain-containing protein [Cephalotus follicularis]
          Length = 201

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = +3

Query: 6   NNCEHFATFCRTGRRFSGQIFIKY-PHLKQLPTLERENMAAGNCTN 140
           NNCEHFAT+CRTG +FSGQ+  K+   ++QLP  E E + +G   N
Sbjct: 153 NNCEHFATYCRTGTKFSGQVIPKFGDTVQQLPICEIEKITSGTYVN 198


>dbj|GAV74185.1| LRAT domain-containing protein [Cephalotus follicularis]
          Length = 200

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 4/45 (8%)
 Frame = +3

Query: 6   NNCEHFATFCRTGRRFSGQIFIKY----PHLKQLPTLERENMAAG 128
           NNCEHFAT C+TGR+FSGQ+  K      +L++LP  E E +AAG
Sbjct: 155 NNCEHFATLCKTGRKFSGQVMAKRVAPGVNLEELPIEELEKIAAG 199


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