BLASTX nr result

ID: Ophiopogon26_contig00027034 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00027034
         (401 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAV89192.1| LRAT domain-containing protein [Cephalotus folli...    56   7e-07
dbj|GAV92602.1| LRAT domain-containing protein [Cephalotus folli...    55   1e-06
dbj|GAV90701.1| LRAT domain-containing protein [Cephalotus folli...    54   3e-06
dbj|GAV90699.1| LRAT domain-containing protein [Cephalotus folli...    54   7e-06
dbj|GAV74185.1| LRAT domain-containing protein [Cephalotus folli...    53   9e-06

>dbj|GAV89192.1| LRAT domain-containing protein [Cephalotus follicularis]
          Length = 201

 Score = 56.2 bits (134), Expect = 7e-07
 Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
 Frame = +3

Query: 6   NNCEHFATFCRTGSKFSGQVFIRY-PLLEQKPTHEIENIAAGNCTN 140
           NNCEHFAT+CRTG+KFSGQV  ++   ++Q P  EIE I +G   N
Sbjct: 153 NNCEHFATYCRTGTKFSGQVIPKFGDTVQQLPICEIEKITSGTYVN 198


>dbj|GAV92602.1| LRAT domain-containing protein [Cephalotus follicularis]
          Length = 200

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
 Frame = +3

Query: 6   NNCEHFATFCRTGSKFSGQVFIRYPL----LEQKPTHEIENIAAG 128
           NNCEHFATFC+TG KFSGQV  +       LE+ P  E+E IAAG
Sbjct: 155 NNCEHFATFCKTGRKFSGQVMAKRVAPGVNLEELPIEELEKIAAG 199


>dbj|GAV90701.1| LRAT domain-containing protein [Cephalotus follicularis]
          Length = 200

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 29/46 (63%), Positives = 32/46 (69%), Gaps = 4/46 (8%)
 Frame = +3

Query: 6   NNCEHFATFCRTGSKFSGQVF-IRYPLL---EQKPTHEIENIAAGN 131
           NNCEHFATFCRTG KFSGQV   R P L   E  P  E+E +AAG+
Sbjct: 153 NNCEHFATFCRTGRKFSGQVLPWRLPDLYKPEMVPIEELEKLAAGD 198


>dbj|GAV90699.1| LRAT domain-containing protein [Cephalotus follicularis]
          Length = 203

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 28/45 (62%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
 Frame = +3

Query: 6   NNCEHFATFCRTGSKFSGQVF-IRYPL---LEQKPTHEIENIAAG 128
           NNCEHFATFCRTG KFSGQV   R P     E+ P  ++E IAAG
Sbjct: 156 NNCEHFATFCRTGRKFSGQVIPTRLPAGVKPEEVPIEDLEKIAAG 200


>dbj|GAV74185.1| LRAT domain-containing protein [Cephalotus follicularis]
          Length = 200

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
 Frame = +3

Query: 6   NNCEHFATFCRTGSKFSGQVFIRYPL----LEQKPTHEIENIAAG 128
           NNCEHFAT C+TG KFSGQV  +       LE+ P  E+E IAAG
Sbjct: 155 NNCEHFATLCKTGRKFSGQVMAKRVAPGVNLEELPIEELEKIAAG 199


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