BLASTX nr result

ID: Ophiopogon26_contig00026997 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00026997
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_094908429.1| penicillin-binding protein [Marinococcus hal...    57   3e-06

>ref|WP_094908429.1| penicillin-binding protein [Marinococcus halophilus]
 gb|OZT79927.1| hypothetical protein CHL76_09475 [Marinococcus halophilus]
          Length = 1148

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/139 (28%), Positives = 59/139 (42%)
 Frame = +3

Query: 78   ESTGSDNKVEEATTNPRSGDASKNDSLPSSEVESQVASDSQAKIAGNSSMEVXXXXXXXX 257
            E  GSDN       N  SGD+  NDS  SS  E+    +++++   NSS +         
Sbjct: 917  EDNGSDNSSNNGNDNQNSGDSGANDSSSSSNEENSADENNESEGGDNSSSDSSSDSSGTS 976

Query: 258  XXXXXVPKSVEGNNVVMADSNGVPLGEEGGSQADRISEGQTSGNDSIESVTTDTSSEGEN 437
                  P + + ++    +SN     E GGS  D   E     + S  S  ++TS +  N
Sbjct: 977  EDNSEEPSNNDSSDESTNESNTTDETENGGSSTDE-EESSEDSSPSEGSSDSETSDDSSN 1035

Query: 438  ANLSSSSEEKGTVMSDVNG 494
               SS+  E G+  SD +G
Sbjct: 1036 EEDSSAPSEDGSGDSDSSG 1054


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