BLASTX nr result

ID: Ophiopogon26_contig00026956 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00026956
         (400 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK74792.1| uncharacterized protein A4U43_C03F10190 [Asparagu...    70   4e-11
ref|XP_020258376.1| rRNA biogenesis protein RRP5 [Asparagus offi...    70   4e-11

>gb|ONK74792.1| uncharacterized protein A4U43_C03F10190 [Asparagus officinalis]
          Length = 930

 Score = 69.7 bits (169), Expect = 4e-11
 Identities = 44/74 (59%), Positives = 45/74 (60%)
 Frame = +1

Query: 178 MVAHGEKTKRKSLNQNPNKSLAPKSQXXXXXXXXXXXXXXXXXXXXXLPTSLLVQDDDPE 357
           M AHGEK K+KS  QNPN  LAPKSQ                     L TSLLVQDDDPE
Sbjct: 1   MAAHGEK-KKKSQKQNPNH-LAPKSQKPFKRSKKEKIPKEPASTDS-LSTSLLVQDDDPE 57

Query: 358 FPRGGGSFLSRKEE 399
           FPRGGGS LSRKEE
Sbjct: 58  FPRGGGSVLSRKEE 71


>ref|XP_020258376.1| rRNA biogenesis protein RRP5 [Asparagus officinalis]
          Length = 1915

 Score = 69.7 bits (169), Expect = 4e-11
 Identities = 44/74 (59%), Positives = 45/74 (60%)
 Frame = +1

Query: 178 MVAHGEKTKRKSLNQNPNKSLAPKSQXXXXXXXXXXXXXXXXXXXXXLPTSLLVQDDDPE 357
           M AHGEK K+KS  QNPN  LAPKSQ                     L TSLLVQDDDPE
Sbjct: 1   MAAHGEK-KKKSQKQNPNH-LAPKSQKPFKRSKKEKIPKEPASTDS-LSTSLLVQDDDPE 57

Query: 358 FPRGGGSFLSRKEE 399
           FPRGGGS LSRKEE
Sbjct: 58  FPRGGGSVLSRKEE 71


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