BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00026915
         (543 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    84   2e-15
ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    84   2e-15
ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, m...    83   3e-15
ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    82   1e-14
ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m...    82   1e-14
gb|PKA46324.1| DNA-directed RNA polymerase 2, chloroplastic/mito...    62   5e-08
gb|PKU80441.1| DNA-directed RNA polymerase 2, chloroplastic/mito...    60   2e-07
ref|XP_020694074.1| DNA-directed RNA polymerase 2, chloroplastic...    60   2e-07

>ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial isoform X2 [Elaeis
           guineensis]
          Length = 1036

 Score = 84.0 bits (206), Expect = 2e-15
 Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
 Frame = -2

Query: 422 MLRNLARRAPISTQNLIFSPHLLPSSLRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFS 243
           M R  A+ A  S++NL FS     S+LRPISSFLGF+ +     +N +LDL+ P    F 
Sbjct: 37  MWRIFAQTASNSSKNLRFSAGRSLSALRPISSFLGFTQDSFLWEKNRILDLRPPFNSRFC 96

Query: 242 ELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE----EEMQSLL 75
           ++G   N E  P V  S  PI      L +S+GFA  A+ +ASTD+DEE    EE+QSLL
Sbjct: 97  DIGPHHNGELWPSVGYSNCPIGKLSGFLANSRGFADVAEAVASTDLDEEASSIEEIQSLL 156

Query: 74  GELS 63
            E S
Sbjct: 157 EETS 160


>ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial isoform X1 [Elaeis
           guineensis]
          Length = 1042

 Score = 84.0 bits (206), Expect = 2e-15
 Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
 Frame = -2

Query: 422 MLRNLARRAPISTQNLIFSPHLLPSSLRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFS 243
           M R  A+ A  S++NL FS     S+LRPISSFLGF+ +     +N +LDL+ P    F 
Sbjct: 37  MWRIFAQTASNSSKNLRFSAGRSLSALRPISSFLGFTQDSFLWEKNRILDLRPPFNSRFC 96

Query: 242 ELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE----EEMQSLL 75
           ++G   N E  P V  S  PI      L +S+GFA  A+ +ASTD+DEE    EE+QSLL
Sbjct: 97  DIGPHHNGELWPSVGYSNCPIGKLSGFLANSRGFADVAEAVASTDLDEEASSIEEIQSLL 156

Query: 74  GELS 63
            E S
Sbjct: 157 EETS 160


>ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
           dactylifera]
          Length = 1036

 Score = 83.2 bits (204), Expect = 3e-15
 Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
 Frame = -2

Query: 422 MLRNLARRAPISTQNLIFSPHLLPSSLRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFS 243
           M R +A+ A  S +NL F      S+LRPISSFLGFS +   C +N + DL+ P    F 
Sbjct: 37  MWRIIAQTASNSLKNLRFFAGGSLSALRPISSFLGFSQDSFLCEKNRIWDLRPPLSSRFC 96

Query: 242 ELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE----EEMQSLL 75
           ++G  +N E  P V  S   I      L +SKG+A  A+ + STD+DEE    EE+QSLL
Sbjct: 97  DIGSHRNGELWPSVGYSNCSIGKLSGFLANSKGYANVAEAVVSTDLDEEASSIEEIQSLL 156

Query: 74  GELSK 60
            E+S+
Sbjct: 157 EEMSR 161


>ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score = 81.6 bits (200), Expect = 1e-14
 Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 11/148 (7%)
 Frame = -2

Query: 446 ISTRNPQIMLRNLARRAPISTQNLIFS--PHLLPSSLRPISSFLGFSHNPLSCPQNAVLD 273
           + T  P+ M RNLA +A  S++ L F+  P  +P+ +  ISSF+G + + +SC ++ +LD
Sbjct: 30  VLTPIPKEMWRNLATKASSSSRYLGFAGRPSSVPA-IPSISSFIGSAQDSISCERSRILD 88

Query: 272 LKAPRIYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE- 96
           L AP  +  S +G   N + LP +  S   I      L DS+ FA+ A+ +ASTDVDE+ 
Sbjct: 89  LTAPFSHRSSNMGFCHNGDLLPFIRRSNSSIWRISGHLGDSRFFASVAEAVASTDVDEDA 148

Query: 95  ---EEMQSLLGELSK-----GSEISGQI 36
              EE+Q +L E+SK     GS+I G +
Sbjct: 149 SSIEEIQGMLEEMSKIDAREGSKIGGNL 176


>ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           [Phoenix dactylifera]
          Length = 1038

 Score = 81.6 bits (200), Expect = 1e-14
 Identities = 57/159 (35%), Positives = 91/159 (57%), Gaps = 12/159 (7%)
 Frame = -2

Query: 446 ISTRNPQIMLRNLARRAPISTQNLIFS--PHLLPSSLRPISSFLGFSHNPLSCPQNAVLD 273
           + T  P+ M RNLAR+A  S++ L F+  P  +P+ +  ISSFLG S + + C ++ +LD
Sbjct: 30  VLTPIPKEMWRNLARKASSSSRYLDFAGRPSSVPA-IPSISSFLGSSQDSICCERSRILD 88

Query: 272 LKAPRIYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE- 96
           L  P  +  S  G+  N +S P +    + I      L DS+ FA+ A+ ++STDVDE+ 
Sbjct: 89  LGTPFSHRSSNTGVGHNGDSSPFIRCPNFSIGRISGRLGDSRFFASVAEAVSSTDVDEDT 148

Query: 95  ---EEMQSLLGELSK-----GSEISGQI-HLKKADQMGK 6
              EE+Q +L E+SK     GS+I G +  ++   Q+G+
Sbjct: 149 SSIEEIQGMLEEMSKIDVREGSKIGGNLEEVRPKQQLGQ 187


>gb|PKA46324.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Apostasia shenzhenica]
          Length = 1037

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 44/124 (35%), Positives = 63/124 (50%)
 Frame = -2

Query: 461 LSPHKISTRNPQIMLRNLARRAPISTQNLIFSPHLLPSSLRPISSFLGFSHNPLSCPQNA 282
           + P   S    + M  +LA +A  S++NL  S      S R   SFLGF H+ + C + +
Sbjct: 49  IPPSFSSPARSKDMWLSLATQALYSSRNLRLSGRSAFCSPRVFFSFLGFPHSRIPCEKES 108

Query: 281 VLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVD 102
           +L+LK P    FSE+G   N  S PL     + +      +   +G ++ A EIASTDVD
Sbjct: 109 ILELK-PLCLRFSEMGSRPNAASRPLSDYLSHSMIRSSGFISRYRGMSSVAAEIASTDVD 167

Query: 101 EEEE 90
           EE E
Sbjct: 168 EEGE 171


>gb|PKU80441.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Dendrobium catenatum]
          Length = 698

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/95 (42%), Positives = 55/95 (57%)
 Frame = -2

Query: 374 IFSPHLLPSSLRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVID 195
           + S +L+ SS R ISSF+G +  P  C + A+LDLK      FS L   +NR  L  + D
Sbjct: 11  LHSRNLIRSSYRCISSFIGLTREPYPCSKKAILDLK------FS-LSSQKNRFLLFALDD 63

Query: 194 SKYPIASPRASLIDSKGFATAADEIASTDVDEEEE 90
            K PIA P   +   +G A+ A+E+ STDVDE+ E
Sbjct: 64  LKCPIAKPPGFI---RGLASVAEEVVSTDVDEDVE 95


>ref|XP_020694074.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like
           [Dendrobium catenatum]
          Length = 937

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/95 (42%), Positives = 55/95 (57%)
 Frame = -2

Query: 374 IFSPHLLPSSLRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVID 195
           + S +L+ SS R ISSF+G +  P  C + A+LDLK      FS L   +NR  L  + D
Sbjct: 11  LHSRNLIRSSYRCISSFIGLTREPYPCSKKAILDLK------FS-LSSQKNRFLLFALDD 63

Query: 194 SKYPIASPRASLIDSKGFATAADEIASTDVDEEEE 90
            K PIA P   +   +G A+ A+E+ STDVDE+ E
Sbjct: 64  LKCPIAKPPGFI---RGLASVAEEVVSTDVDEDVE 95