BLASTX nr result

ID: Ophiopogon26_contig00026891 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00026891
         (356 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020260230.1| signal recognition particle subunit SRP72-li...    57   4e-07

>ref|XP_020260230.1| signal recognition particle subunit SRP72-like [Asparagus
           officinalis]
 gb|ONK71155.1| uncharacterized protein A4U43_C04F5360 [Asparagus officinalis]
          Length = 677

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 30/53 (56%), Positives = 36/53 (67%)
 Frame = +2

Query: 2   RGSQGAVVREKHDXXXXXXXXXXXXXQKAGQGNASAAKGKSATNTEQQPRASN 160
           RGSQGAVVREKHD             QKAGQ NA ++KGK+A ++EQQP+ SN
Sbjct: 616 RGSQGAVVREKHDAVAASNAASSSN-QKAGQSNAGSSKGKNAASSEQQPKGSN 667


Top