BLASTX nr result

ID: Ophiopogon26_contig00026858 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00026858
         (736 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252624.1| uncharacterized protein LOC109829935 [Aspara...   185   8e-52
gb|ONK77004.1| uncharacterized protein A4U43_C02F2120 [Asparagus...   185   2e-50

>ref|XP_020252624.1| uncharacterized protein LOC109829935 [Asparagus officinalis]
          Length = 509

 Score =  185 bits (469), Expect = 8e-52
 Identities = 115/236 (48%), Positives = 147/236 (62%), Gaps = 2/236 (0%)
 Frame = +2

Query: 2   GDKISPCCTPRVFADSEEP-ISLSVSDNEILENFIPNNVASDVSGIS-SDVPLKHCAVTG 175
           G K+S      VFAD+EE  ++++VS+NE +EN   NN A+D +GI  SD  LK+C   G
Sbjct: 235 GSKVSLSSRLGVFADAEESTMAVTVSNNETVENSTENNGATDAAGIPCSDTQLKYCTFKG 294

Query: 176 KVSPFFSIDLDLTNVSNFDKISTMCMEGLKNSDRSDVISIAMEAPRTVTELVDGISSAAD 355
           K S   S D  L N S  D+IST C+E ++ SD   ++S+   AP  VTELV  IS+AAD
Sbjct: 295 KDS-LVSTDFFLANTSTIDEISTTCVEDVRTSDSPGIVSVTTVAPSDVTELVCKISNAAD 353

Query: 356 GLLSSNGSGTFSTRSLGNVIPEEQVNTKGVEREHKDGVLSDNAPLMMDSVELAQSEVREA 535
           G LSSNG   FS +SL  +IPEEQ+   G+ERE  D V SDNAP  +D +E   S   + 
Sbjct: 354 GHLSSNGKEAFSLKSLEKIIPEEQIEATGLEREPNDEVFSDNAPQKIDFLESDPSGGIDG 413

Query: 536 LLPDAVPFEDGFSEMKVQEKEGLADSDAGMEDVLVKREDHNQQGSIAADGCATYRL 703
            L  AVPF    SE+K  E+E L D+DA ME+VLVK EDHNQQ + +A G   YRL
Sbjct: 414 QLSGAVPF---VSELKTLEEEVLVDTDACMEEVLVKHEDHNQQEATSAYG---YRL 463


>gb|ONK77004.1| uncharacterized protein A4U43_C02F2120 [Asparagus officinalis]
          Length = 740

 Score =  185 bits (469), Expect = 2e-50
 Identities = 115/236 (48%), Positives = 147/236 (62%), Gaps = 2/236 (0%)
 Frame = +2

Query: 2    GDKISPCCTPRVFADSEEP-ISLSVSDNEILENFIPNNVASDVSGIS-SDVPLKHCAVTG 175
            G K+S      VFAD+EE  ++++VS+NE +EN   NN A+D +GI  SD  LK+C   G
Sbjct: 453  GSKVSLSSRLGVFADAEESTMAVTVSNNETVENSTENNGATDAAGIPCSDTQLKYCTFKG 512

Query: 176  KVSPFFSIDLDLTNVSNFDKISTMCMEGLKNSDRSDVISIAMEAPRTVTELVDGISSAAD 355
            K S   S D  L N S  D+IST C+E ++ SD   ++S+   AP  VTELV  IS+AAD
Sbjct: 513  KDS-LVSTDFFLANTSTIDEISTTCVEDVRTSDSPGIVSVTTVAPSDVTELVCKISNAAD 571

Query: 356  GLLSSNGSGTFSTRSLGNVIPEEQVNTKGVEREHKDGVLSDNAPLMMDSVELAQSEVREA 535
            G LSSNG   FS +SL  +IPEEQ+   G+ERE  D V SDNAP  +D +E   S   + 
Sbjct: 572  GHLSSNGKEAFSLKSLEKIIPEEQIEATGLEREPNDEVFSDNAPQKIDFLESDPSGGIDG 631

Query: 536  LLPDAVPFEDGFSEMKVQEKEGLADSDAGMEDVLVKREDHNQQGSIAADGCATYRL 703
             L  AVPF    SE+K  E+E L D+DA ME+VLVK EDHNQQ + +A G   YRL
Sbjct: 632  QLSGAVPF---VSELKTLEEEVLVDTDACMEEVLVKHEDHNQQEATSAYG---YRL 681


Top