BLASTX nr result

ID: Ophiopogon26_contig00026742 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00026742
         (353 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009390764.1| PREDICTED: DNA polymerase delta catalytic su...    85   8e-17
ref|XP_020245108.1| DNA polymerase delta catalytic subunit [Aspa...    81   2e-15
ref|XP_010930715.1| PREDICTED: DNA polymerase delta catalytic su...    81   2e-15
ref|XP_008781602.1| PREDICTED: DNA polymerase delta catalytic su...    81   3e-15
ref|XP_020112061.1| DNA polymerase delta catalytic subunit [Anan...    76   1e-13
gb|PKU73204.1| DNA polymerase delta catalytic subunit [Dendrobiu...    75   3e-13
ref|XP_020676528.1| DNA polymerase delta catalytic subunit [Dend...    75   3e-13
gb|OAY64752.1| DNA polymerase delta catalytic subunit [Ananas co...    75   4e-13
ref|XP_020588039.1| DNA polymerase delta catalytic subunit [Phal...    74   5e-13
gb|KMZ73586.1| DNA-directed DNA polymerase [Zostera marina]            71   6e-12
gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indi...    66   3e-10
ref|XP_015617044.1| PREDICTED: DNA polymerase delta catalytic su...    65   9e-10
gb|AQK58649.1| DNA polymerase delta catalytic subunit [Zea mays]       64   2e-09
ref|XP_008679644.2| DNA polymerase delta catalytic subunit [Zea ...    64   2e-09
gb|PKA57115.1| DNA polymerase delta catalytic subunit [Apostasia...    61   2e-09
gb|PAN41584.1| hypothetical protein PAHAL_H00976 [Panicum hallii]      62   8e-09
ref|XP_002450450.1| DNA polymerase delta catalytic subunit [Sorg...    62   1e-08
ref|XP_020149913.1| DNA polymerase delta catalytic subunit [Aegi...    62   1e-08
gb|PKA57109.1| DNA polymerase delta catalytic subunit [Apostasia...    61   3e-08
ref|XP_021899855.1| LOW QUALITY PROTEIN: DNA polymerase delta ca...    60   4e-08

>ref|XP_009390764.1| PREDICTED: DNA polymerase delta catalytic subunit [Musa acuminata
           subsp. malaccensis]
 ref|XP_009390765.1| PREDICTED: DNA polymerase delta catalytic subunit [Musa acuminata
           subsp. malaccensis]
          Length = 1101

 Score = 85.1 bits (209), Expect = 8e-17
 Identities = 44/85 (51%), Positives = 55/85 (64%)
 Frame = -1

Query: 257 SGSKRRGPPPTVAGNLSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYEE 78
           +  +R GPPP  A N SKRF                 +   +EMMDEDVFLEETL++YEE
Sbjct: 5   NAKRRGGPPPAPASNPSKRFQAGSRNPQTPQQPLNG-VAAEEEMMDEDVFLEETLLRYEE 63

Query: 77  DEEALILLRDEGLASRLSKWKRPNL 3
           DEEA++LLRDE  +SRLS+W+RP L
Sbjct: 64  DEEAVLLLRDEAFSSRLSRWRRPAL 88


>ref|XP_020245108.1| DNA polymerase delta catalytic subunit [Asparagus officinalis]
 gb|ONK57982.1| uncharacterized protein A4U43_C09F6430 [Asparagus officinalis]
          Length = 1086

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 39/44 (88%), Positives = 42/44 (95%)
 Frame = -1

Query: 134 DEMMDEDVFLEETLIKYEEDEEALILLRDEGLASRLSKWKRPNL 3
           DEMMDEDV+LEETLIKYEEDEEALILL DE +ASRLSKWKRP+L
Sbjct: 46  DEMMDEDVYLEETLIKYEEDEEALILLGDEAVASRLSKWKRPSL 89


>ref|XP_010930715.1| PREDICTED: DNA polymerase delta catalytic subunit [Elaeis
           guineensis]
 ref|XP_010930716.1| PREDICTED: DNA polymerase delta catalytic subunit [Elaeis
           guineensis]
          Length = 1098

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 44/85 (51%), Positives = 53/85 (62%)
 Frame = -1

Query: 257 SGSKRRGPPPTVAGNLSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYEE 78
           +  KRRGP      N SKRF                 +   +EM+DEDVFLEETL+KYEE
Sbjct: 3   ASGKRRGPSVAAPPNPSKRFQAGSAAGGQNPQPPPAGME--EEMVDEDVFLEETLLKYEE 60

Query: 77  DEEALILLRDEGLASRLSKWKRPNL 3
           D+EAL+ LR E L+SRLSKWKRP+L
Sbjct: 61  DQEALLFLRGEALSSRLSKWKRPSL 85


>ref|XP_008781602.1| PREDICTED: DNA polymerase delta catalytic subunit [Phoenix
           dactylifera]
          Length = 1098

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 44/84 (52%), Positives = 51/84 (60%)
 Frame = -1

Query: 254 GSKRRGPPPTVAGNLSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYEED 75
           G KRRGPP     N  KR                      +EM+DEDV LEETL+KYEED
Sbjct: 4   GGKRRGPPAGAPRNPPKRLQAGSAAGSPNLQPPPAGTE--EEMLDEDVLLEETLLKYEED 61

Query: 74  EEALILLRDEGLASRLSKWKRPNL 3
           EEAL+ LR+E L+SRLSKWKRP+L
Sbjct: 62  EEALLFLRNEALSSRLSKWKRPSL 85


>ref|XP_020112061.1| DNA polymerase delta catalytic subunit [Ananas comosus]
 ref|XP_020112062.1| DNA polymerase delta catalytic subunit [Ananas comosus]
 ref|XP_020112063.1| DNA polymerase delta catalytic subunit [Ananas comosus]
          Length = 1101

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 45/86 (52%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
 Frame = -1

Query: 254 GSKRRGPPPTVAGN--LSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYE 81
           G KRRGPPP  A +   +KRF                   + +EMMDEDVFLEE L+  E
Sbjct: 7   GGKRRGPPPAAAPSPASAKRFQPSDAPSHAPSPPPHGGAAMEEEMMDEDVFLEEALL--E 64

Query: 80  EDEEALILLRDEGLASRLSKWKRPNL 3
           E EE L+LLRDE L+SRLSKWKRP L
Sbjct: 65  EAEEELLLLRDEALSSRLSKWKRPPL 90


>gb|PKU73204.1| DNA polymerase delta catalytic subunit [Dendrobium catenatum]
          Length = 1099

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -1

Query: 134 DEMMDEDVFLEETLIKYEEDEEALILLRDEGLASRLSKWKRPNL 3
           D++MDED+FLEETL+KYEEDEEAL L  DE LASRLSKWKRP L
Sbjct: 46  DDLMDEDIFLEETLLKYEEDEEALRLAEDEALASRLSKWKRPAL 89


>ref|XP_020676528.1| DNA polymerase delta catalytic subunit [Dendrobium catenatum]
          Length = 1102

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -1

Query: 134 DEMMDEDVFLEETLIKYEEDEEALILLRDEGLASRLSKWKRPNL 3
           D++MDED+FLEETL+KYEEDEEAL L  DE LASRLSKWKRP L
Sbjct: 46  DDLMDEDIFLEETLLKYEEDEEALRLAEDEALASRLSKWKRPAL 89


>gb|OAY64752.1| DNA polymerase delta catalytic subunit [Ananas comosus]
          Length = 1094

 Score = 74.7 bits (182), Expect = 4e-13
 Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
 Frame = -1

Query: 254 GSKRRGPPPTVAGN--LSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYE 81
           G KRRGPPP+   +   +KRF                   + +EMMDEDVFLEE L+  E
Sbjct: 7   GGKRRGPPPSAEPSPASAKRFQPSDAPSHAPSPPPHGGAAMEEEMMDEDVFLEEALL--E 64

Query: 80  EDEEALILLRDEGLASRLSKWKRPNL 3
           E EE L+LLRDE L+SRLSKWKRP L
Sbjct: 65  EAEEELLLLRDEALSSRLSKWKRPPL 90


>ref|XP_020588039.1| DNA polymerase delta catalytic subunit [Phalaenopsis equestris]
          Length = 1103

 Score = 74.3 bits (181), Expect = 5e-13
 Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
 Frame = -1

Query: 248 KRRGPPPTVAGNLSKRFXXXXXXXXXXXXXXXXPI----PI*DEMMDEDVFLEETLIKYE 81
           KRRG     + N SKRF                 +     + D++MDEDVFLEETL+KY+
Sbjct: 7   KRRGLAAEASPNPSKRFQSGPPGPGNGKPNPSPAVNGINEMEDDLMDEDVFLEETLLKYD 66

Query: 80  EDEEALILLRDEGLASRLSKWKRPNL 3
           EDEEAL LL+DE +A+R SKWKRP L
Sbjct: 67  EDEEALRLLQDEAVAARFSKWKRPAL 92


>gb|KMZ73586.1| DNA-directed DNA polymerase [Zostera marina]
          Length = 1101

 Score = 71.2 bits (173), Expect = 6e-12
 Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = -1

Query: 251 SKRRGPPPTVAGNLSKRFXXXXXXXXXXXXXXXXP-IPI*DEMMDEDVFLEETLIKYEED 75
           +KRRG P   + N SKR                   + I ++MMDEDVFLEET +K EED
Sbjct: 6   TKRRGAPAP-SSNPSKRLQHKGTAETPAFAQQQHAGVAIEEDMMDEDVFLEETALKLEED 64

Query: 74  EEALILLRDEGLASRLSKWKRPNL 3
           EEAL+L+++E L++RLS+WKRP+L
Sbjct: 65  EEALLLMQNEALSARLSRWKRPSL 88


>gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group]
          Length = 1087

 Score = 66.2 bits (160), Expect = 3e-10
 Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = -1

Query: 254 GSKRRG-PPPTVAGNLSKRFXXXXXXXXXXXXXXXXPIPI*DE-MMDEDVFLEETLIKYE 81
           G KRRG PPP  +G  +KR                    + +E MMDEDVFL+ET++   
Sbjct: 7   GGKRRGAPPPGPSGAAAKRAHPGGTPQPPPPAATAAAPVVEEEDMMDEDVFLDETILA-- 64

Query: 80  EDEEALILL-RDEGLASRLSKWKRPNL 3
           EDEEAL+LL RDE LASRLS+WKRP L
Sbjct: 65  EDEEALLLLDRDEALASRLSRWKRPAL 91


>ref|XP_015617044.1| PREDICTED: DNA polymerase delta catalytic subunit [Oryza sativa
           Japonica Group]
 sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA polymerase delta catalytic subunit
 dbj|BAA99573.1| OsPol delta large subunit [Oryza sativa Japonica Group]
 gb|AAX96341.1| dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza sativa
           Japonica Group]
 gb|ABA91815.1| DNA polymerase delta catalytic subunit, putative, expressed [Oryza
           sativa Japonica Group]
 dbj|BAF27768.1| Os11g0186400 [Oryza sativa Japonica Group]
 dbj|BAT12986.1| Os11g0186400 [Oryza sativa Japonica Group]
          Length = 1105

 Score = 65.1 bits (157), Expect = 9e-10
 Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
 Frame = -1

Query: 254 GSKRRG-PPPTVAGNLSKRFXXXXXXXXXXXXXXXXPIPI*DE--MMDEDVFLEETLIKY 84
           G KRRG PPP  +G  +KR                   P+ +E  MMDEDVFL+ET++  
Sbjct: 7   GGKRRGAPPPGPSGAAAKR-AHPGGTPQPPPPAATAAAPVAEEEDMMDEDVFLDETILA- 64

Query: 83  EEDEEALILL-RDEGLASRLSKWKRPNL 3
            EDEEAL+LL RDE LASRLS+W+RP L
Sbjct: 65  -EDEEALLLLDRDEALASRLSRWRRPAL 91


>gb|AQK58649.1| DNA polymerase delta catalytic subunit [Zea mays]
          Length = 420

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = -1

Query: 254 GSKRRGPPPTVAGNLSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYEED 75
           G KRRGPPP      + +                    + ++MMDEDVFL+E+++   ED
Sbjct: 7   GGKRRGPPPLAPSGAAAKRVNPSPGTPHVPPPASAAAAVEEDMMDEDVFLDESILA--ED 64

Query: 74  EEALILL-RDEGLASRLSKWKRP 9
           E AL++L RDE LASRL++WKRP
Sbjct: 65  EAALLMLQRDEALASRLARWKRP 87


>ref|XP_008679644.2| DNA polymerase delta catalytic subunit [Zea mays]
 gb|AQK58650.1| DNA polymerase delta catalytic subunit [Zea mays]
          Length = 1103

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = -1

Query: 254 GSKRRGPPPTVAGNLSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYEED 75
           G KRRGPPP      + +                    + ++MMDEDVFL+E+++   ED
Sbjct: 7   GGKRRGPPPLAPSGAAAKRVNPSPGTPHVPPPASAAAAVEEDMMDEDVFLDESILA--ED 64

Query: 74  EEALILL-RDEGLASRLSKWKRP 9
           E AL++L RDE LASRL++WKRP
Sbjct: 65  EAALLMLQRDEALASRLARWKRP 87


>gb|PKA57115.1| DNA polymerase delta catalytic subunit [Apostasia shenzhenica]
          Length = 132

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -1

Query: 134 DEMMDEDVFLEETLIKYEEDEEALILLRDEGLASRLSKWKR 12
           DEMMDEDVFLEE L+KY EDEE+L LL DE   +RLSKWKR
Sbjct: 49  DEMMDEDVFLEENLLKYGEDEESLRLLEDE---ARLSKWKR 86


>gb|PAN41584.1| hypothetical protein PAHAL_H00976 [Panicum hallii]
          Length = 1103

 Score = 62.4 bits (150), Expect = 8e-09
 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -1

Query: 254 GSKRRGPPPTVAGNLSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYEED 75
           G KRRGPPP      + +                 P    ++MMDEDVFL+E+++   ED
Sbjct: 7   GGKRRGPPPPAPSGAAAKRANPGAPQPPPPAAAAAPAAEEEDMMDEDVFLDESILA--ED 64

Query: 74  EEALILL-RDEGLASRLSKWKRPNL 3
           E AL++L RDE LASRL++WKRP L
Sbjct: 65  EAALLMLQRDEALASRLARWKRPAL 89


>ref|XP_002450450.1| DNA polymerase delta catalytic subunit [Sorghum bicolor]
 gb|EES09438.1| hypothetical protein SORBI_3005G066900 [Sorghum bicolor]
          Length = 1099

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
 Frame = -1

Query: 254 GSKRRGPPPTV-AGNLSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYEE 78
           G KRRGPPP   +G  +KR                      ++MMDEDVFL+E+++   E
Sbjct: 7   GGKRRGPPPPAPSGAAAKRANPSPGMPQPPPPAAAE-----EDMMDEDVFLDESILA--E 59

Query: 77  DEEALILL-RDEGLASRLSKWKRPNL 3
           DE AL++L RDE LASRL++WKRP L
Sbjct: 60  DEAALLMLQRDEALASRLARWKRPAL 85


>ref|XP_020149913.1| DNA polymerase delta catalytic subunit [Aegilops tauschii subsp.
           tauschii]
          Length = 1103

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = -1

Query: 254 GSKRRGPPPTVAGNLSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYEED 75
           G KRR  PP     L+ +                      ++MMDEDVFL+ET++   ED
Sbjct: 7   GGKRRAGPPAAPSPLAAKRPQPMPPGAPQPPPPAAAAAEEEDMMDEDVFLDETILA--ED 64

Query: 74  EEALILL-RDEGLASRLSKWKRPNL 3
           E AL+LL RDE LASRLS+WKRP L
Sbjct: 65  EAALLLLDRDEALASRLSRWKRPAL 89


>gb|PKA57109.1| DNA polymerase delta catalytic subunit [Apostasia shenzhenica]
          Length = 1075

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -1

Query: 125 MDEDVFLEETLIKYEEDEEALILLRDEGLASRLSKWKRPNL 3
           MDEDVFLEE L+KYEEDEE+L LL DE   +RLSKWKRP L
Sbjct: 1   MDEDVFLEENLLKYEEDEESLRLLEDE---ARLSKWKRPAL 38


>ref|XP_021899855.1| LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit [Carica
           papaya]
          Length = 911

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
 Frame = -1

Query: 260 DSGSKRRGPPPTVAGNLSKRFXXXXXXXXXXXXXXXXPIPI*DEMMDEDVFLEETLIKYE 81
           ++G++R+ PPP      S+R                    + D+ +DEDVFL+ETLI  E
Sbjct: 2   NNGNQRKRPPPA-----SQRSSSEVKHQATAPAPPPTAAVLEDDFVDEDVFLDETLISGE 56

Query: 80  EDEEALILLRD----EGLASRLSKWKRPNL 3
           EDEE+LI LRD    E LASRLSKW RP L
Sbjct: 57  EDEESLI-LRDIEEREALASRLSKWARPPL 85


Top