BLASTX nr result
ID: Ophiopogon26_contig00026478
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00026478
(403 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK58359.1| uncharacterized protein A4U43_C09F11440 [Asparagu... 96 1e-22
ref|XP_020245280.1| glycine-rich RNA-binding protein 3, mitochon... 96 1e-20
gb|ONK77666.1| uncharacterized protein A4U43_C02F9190 [Asparagus... 74 7e-14
ref|XP_020253325.1| LOW QUALITY PROTEIN: glycine-rich RNA-bindin... 71 8e-12
ref|XP_022776208.1| cleavage and polyadenylation specificity fac... 70 4e-11
gb|PPD77271.1| hypothetical protein GOBAR_DD25795 [Gossypium bar... 70 4e-11
ref|XP_017615445.1| PREDICTED: cleavage and polyadenylation spec... 70 4e-11
ref|XP_016679647.1| PREDICTED: cleavage and polyadenylation spec... 70 4e-11
ref|XP_016721052.1| PREDICTED: cleavage and polyadenylation spec... 70 4e-11
ref|XP_012459070.1| PREDICTED: cleavage and polyadenylation spec... 70 4e-11
gb|KHG22501.1| Cleavage and polyadenylation specificity factor s... 70 4e-11
ref|XP_021632322.1| cleavage and polyadenylation specificity fac... 70 4e-11
ref|XP_021292908.1| LOW QUALITY PROTEIN: cleavage and polyadenyl... 70 4e-11
ref|XP_007044903.1| PREDICTED: cleavage and polyadenylation spec... 70 4e-11
ref|XP_022776207.1| cleavage and polyadenylation specificity fac... 70 4e-11
ref|XP_017971402.1| PREDICTED: cleavage and polyadenylation spec... 70 4e-11
gb|OMO81527.1| hypothetical protein COLO4_23537 [Corchorus olito... 70 4e-11
gb|OMO60333.1| hypothetical protein CCACVL1_24234 [Corchorus cap... 70 4e-11
ref|XP_017971401.1| PREDICTED: cleavage and polyadenylation spec... 70 4e-11
gb|PPS10548.1| hypothetical protein GOBAR_AA10131 [Gossypium bar... 70 4e-11
>gb|ONK58359.1| uncharacterized protein A4U43_C09F11440 [Asparagus officinalis]
Length = 140
Score = 95.9 bits (237), Expect = 1e-22
Identities = 53/101 (52%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
Frame = +1
Query: 127 MPGIGPP--------INNFNSSRVPEYAQENIRVG-DLGYQRGXXXXXXXXXXXXXXXXX 279
MPG+ P +NFN+SRV EY QE VG D G+QRG
Sbjct: 1 MPGVAVPQQNPIVGSSSNFNNSRVSEYTQEVTHVGGDSGFQRGPTAQIPAKVPAPAPPVP 60
Query: 280 XXXXXXXDVNGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
DVNGPTMLFVGELHWWTTDADLE VLTQYGR+KE
Sbjct: 61 RPAVVPVDVNGPTMLFVGELHWWTTDADLERVLTQYGRLKE 101
>ref|XP_020245280.1| glycine-rich RNA-binding protein 3, mitochondrial-like [Asparagus
officinalis]
Length = 421
Score = 95.9 bits (237), Expect = 1e-20
Identities = 53/101 (52%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
Frame = +1
Query: 127 MPGIGPP--------INNFNSSRVPEYAQENIRVG-DLGYQRGXXXXXXXXXXXXXXXXX 279
MPG+ P +NFN+SRV EY QE VG D G+QRG
Sbjct: 1 MPGVAVPQQNPIVGSSSNFNNSRVSEYTQEVTHVGGDSGFQRGPTAQIPAKVPAPAPPVP 60
Query: 280 XXXXXXXDVNGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
DVNGPTMLFVGELHWWTTDADLE VLTQYGR+KE
Sbjct: 61 RPAVVPVDVNGPTMLFVGELHWWTTDADLERVLTQYGRLKE 101
>gb|ONK77666.1| uncharacterized protein A4U43_C02F9190 [Asparagus officinalis]
Length = 147
Score = 73.6 bits (179), Expect = 7e-14
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +1
Query: 301 DVNGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
D+NGPTMLFVGELHWWTTDADLESVLT YGRVKE
Sbjct: 16 DMNGPTMLFVGELHWWTTDADLESVLTHYGRVKE 49
>ref|XP_020253325.1| LOW QUALITY PROTEIN: glycine-rich RNA-binding protein 3,
mitochondrial [Asparagus officinalis]
Length = 370
Score = 71.2 bits (173), Expect = 8e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +1
Query: 304 VNGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
+NGPTMLFVGELHWWTTDADLESVLT YGRVKE
Sbjct: 1 MNGPTMLFVGELHWWTTDADLESVLTHYGRVKE 33
>ref|XP_022776208.1| cleavage and polyadenylation specificity factor subunit 6-like
isoform X2 [Durio zibethinus]
ref|XP_022776209.1| cleavage and polyadenylation specificity factor subunit 6-like
isoform X2 [Durio zibethinus]
ref|XP_022776210.1| cleavage and polyadenylation specificity factor subunit 6-like
isoform X2 [Durio zibethinus]
Length = 646
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 223 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 254
>gb|PPD77271.1| hypothetical protein GOBAR_DD25795 [Gossypium barbadense]
Length = 648
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 255
>ref|XP_017615445.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Gossypium arboreum]
ref|XP_017615446.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Gossypium arboreum]
Length = 648
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 255
>ref|XP_016679647.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Gossypium hirsutum]
Length = 648
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 255
>ref|XP_016721052.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Gossypium hirsutum]
Length = 648
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 255
>ref|XP_012459070.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Gossypium raimondii]
ref|XP_012459071.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Gossypium raimondii]
gb|KJB78035.1| hypothetical protein B456_012G173800 [Gossypium raimondii]
Length = 648
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 255
>gb|KHG22501.1| Cleavage and polyadenylation specificity factor subunit [Gossypium
arboreum]
Length = 648
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 255
>ref|XP_021632322.1| cleavage and polyadenylation specificity factor subunit 6 [Manihot
esculenta]
ref|XP_021632323.1| cleavage and polyadenylation specificity factor subunit 6 [Manihot
esculenta]
gb|OAY32465.1| hypothetical protein MANES_13G019800 [Manihot esculenta]
Length = 650
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 225 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 256
>ref|XP_021292908.1| LOW QUALITY PROTEIN: cleavage and polyadenylation specificity
factor subunit 6-like [Herrania umbratica]
Length = 653
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 228 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 259
>ref|XP_007044903.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X3 [Theobroma cacao]
ref|XP_017971403.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X3 [Theobroma cacao]
ref|XP_017971405.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X3 [Theobroma cacao]
ref|XP_017971406.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X3 [Theobroma cacao]
gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gb|EOY00735.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 228 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 259
>ref|XP_022776207.1| cleavage and polyadenylation specificity factor subunit 6-like
isoform X1 [Durio zibethinus]
Length = 659
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 236 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 267
>ref|XP_017971402.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X2 [Theobroma cacao]
Length = 660
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 235 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 266
>gb|OMO81527.1| hypothetical protein COLO4_23537 [Corchorus olitorius]
Length = 673
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 228 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 259
>gb|OMO60333.1| hypothetical protein CCACVL1_24234 [Corchorus capsularis]
Length = 673
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 228 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 259
>ref|XP_017971401.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X1 [Theobroma cacao]
Length = 700
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 275 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 306
>gb|PPS10548.1| hypothetical protein GOBAR_AA10131 [Gossypium barbadense]
Length = 935
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 255
Score = 69.7 bits (169), Expect = 4e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 307 NGPTMLFVGELHWWTTDADLESVLTQYGRVKE 402
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 511 NGPTMLFVGELHWWTTDAELESVLSQYGRVKE 542