BLASTX nr result

ID: Ophiopogon26_contig00026347 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00026347
         (609 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588284.1| hypothetical protein ZeamMp020 (mitochondrion) ...   166   7e-50
dbj|GAU48484.1| hypothetical protein TSUD_291690 [Trifolium subt...    77   3e-14
gb|PNX82805.1| hypothetical protein L195_g038840 [Trifolium prat...    73   2e-12

>ref|YP_588284.1| hypothetical protein ZeamMp020 (mitochondrion) [Zea mays subsp.
           mays]
 ref|YP_588308.1| hypothetical protein ZeamMp046 (mitochondrion) [Zea mays subsp.
           mays]
 gb|AAR91182.1| hypothetical protein (mitochondrion) [Zea mays]
 gb|AAR91183.1| hypothetical protein (mitochondrion) [Zea mays]
          Length = 99

 Score =  166 bits (420), Expect = 7e-50
 Identities = 80/98 (81%), Positives = 82/98 (83%)
 Frame = +2

Query: 278 GIRSKLSFLFDHFDRGGWIKWTKQTHIFQVPPASKKRWVPFSSRQRKNHLENAPHPFVEP 457
           G +  L  LF HF RGGWIKW KQTHIFQ      KRWVPFSSRQRKNHLENAP+PFV P
Sbjct: 7   GNKKHLKCLFYHFYRGGWIKWAKQTHIFQ-----SKRWVPFSSRQRKNHLENAPNPFVGP 61

Query: 458 CIVSDPNLPGASPPSEASEVGEPYDGQLSPAVRRGLSC 571
           CIVSDPNLPGASPP EASEVGEPYDGQLSPAVRRGLSC
Sbjct: 62  CIVSDPNLPGASPPLEASEVGEPYDGQLSPAVRRGLSC 99


>dbj|GAU48484.1| hypothetical protein TSUD_291690 [Trifolium subterraneum]
          Length = 175

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 52/91 (57%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
 Frame = -2

Query: 497 GGSLRAGSDHLQYTALRRGEERFQDDS---FF----VETKKEPISSY*LAGPGKCESVLS 339
           G SLRAGSD+   T L  G+  +  +S   FF     +TKKEPI S      GKCESVLS
Sbjct: 2   GDSLRAGSDY--NTRLYEGKGWWVGNSILFFFRDEKCKTKKEPIFS-----TGKCESVLS 54

Query: 338 TLSILLYQNDQKGRKACF*FPCLIFSISAPL 246
           T SI LYQND+KGR+ACF F C I SISAPL
Sbjct: 55  TFSIPLYQNDKKGRRACFLFSCSISSISAPL 85


>gb|PNX82805.1| hypothetical protein L195_g038840 [Trifolium pratense]
          Length = 211

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 48/79 (60%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
 Frame = -3

Query: 466 YNTRLYE----GVRSVFKMILSL--SRRKRNPSLLTSWRDLENVSLFCPLYPSSSIKMIK 305
           YNTRLYE     V +VF ++L    +RRKRNPS       L N SLFCPL PS SIKMIK
Sbjct: 11  YNTRLYEVKGWWVGNVFNILLFPINARRKRNPSFR-----LGNASLFCPLSPSLSIKMIK 65

Query: 304 KEGKLASDSRV*SFQSLPR 248
           KEG+LAS SRV S  SLPR
Sbjct: 66  KEGELASYSRVRSLPSLPR 84


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