BLASTX nr result
ID: Ophiopogon26_contig00026275
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00026275
(375 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KMZ72824.1| General transcription factor IIH subunit [Zostera... 61 3e-08
gb|PAN22350.1| hypothetical protein PAHAL_D00154 [Panicum hallii] 59 1e-07
ref|XP_010242943.1| PREDICTED: RNA polymerase II transcription f... 58 3e-07
ref|XP_020686246.1| RNA polymerase II transcription factor B sub... 58 4e-07
ref|XP_009392829.1| PREDICTED: RNA polymerase II transcription f... 58 4e-07
ref|XP_024157660.1| general transcription and DNA repair factor ... 58 4e-07
ref|XP_018679081.1| PREDICTED: RNA polymerase II transcription f... 58 4e-07
ref|XP_009392827.1| PREDICTED: RNA polymerase II transcription f... 58 4e-07
ref|XP_009392826.1| PREDICTED: RNA polymerase II transcription f... 58 4e-07
ref|XP_020247555.1| RNA polymerase II transcription factor B sub... 57 5e-07
ref|XP_020247553.1| RNA polymerase II transcription factor B sub... 57 5e-07
ref|XP_008778431.1| PREDICTED: RNA polymerase II transcription f... 57 5e-07
ref|XP_010940415.1| PREDICTED: RNA polymerase II transcription f... 57 7e-07
gb|OVA13234.1| Transcription factor TFIIH subunit p52/Tfb2 [Macl... 57 7e-07
ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general tran... 57 9e-07
gb|KZV53813.1| phytoene synthase, chloroplastic-like [Dorcoceras... 57 1e-06
ref|XP_022025753.1| RNA polymerase II transcription factor B sub... 56 1e-06
ref|XP_009338076.1| PREDICTED: RNA polymerase II transcription f... 56 2e-06
gb|ONI10385.1| hypothetical protein PRUPE_4G044800 [Prunus persi... 56 2e-06
ref|XP_020581220.1| RNA polymerase II transcription factor B sub... 56 2e-06
>gb|KMZ72824.1| General transcription factor IIH subunit [Zostera marina]
Length = 451
Score = 60.8 bits (146), Expect = 3e-08
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQV+IVARNFMDMVAALPAMKLDKLYDST
Sbjct: 1 MPQVKIVARNFMDMVAALPAMKLDKLYDST 30
>gb|PAN22350.1| hypothetical protein PAHAL_D00154 [Panicum hallii]
Length = 526
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/40 (75%), Positives = 31/40 (77%)
Frame = -3
Query: 124 GGDSIGESPEKMPQVRIVARNFMDMVAALPAMKLDKLYDS 5
GGDS KMPQV +VARNFMDMVAALPA KLD LYDS
Sbjct: 65 GGDSPTLRASKMPQVMVVARNFMDMVAALPASKLDMLYDS 104
>ref|XP_010242943.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
[Nelumbo nucifera]
Length = 451
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQV+I+A+NFMDMVAALPAMKLDKLYD+T
Sbjct: 1 MPQVKIIAKNFMDMVAALPAMKLDKLYDNT 30
>ref|XP_020686246.1| RNA polymerase II transcription factor B subunit 2 [Dendrobium
catenatum]
gb|PKU79818.1| hypothetical protein MA16_Dca024391 [Dendrobium catenatum]
Length = 451
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQVRIVA+NFMDMVA LPAMKLDKLY+ST
Sbjct: 1 MPQVRIVAKNFMDMVAVLPAMKLDKLYEST 30
>ref|XP_009392829.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X4 [Musa acuminata subsp. malaccensis]
Length = 451
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQVRI+A+NFMD+VAALPAMKLDKLY+ST
Sbjct: 1 MPQVRIIAKNFMDLVAALPAMKLDKLYEST 30
>ref|XP_024157660.1| general transcription and DNA repair factor IIH subunit TFB2
[Rosa chinensis]
gb|PRQ28911.1| putative transcription factor TFIIH subunit p52/Tfb2 [Rosa
chinensis]
Length = 453
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQVRI+A+NFMDMVAALPAMKLDKLYD++
Sbjct: 1 MPQVRIIAKNFMDMVAALPAMKLDKLYDNS 30
>ref|XP_018679081.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X3 [Musa acuminata subsp. malaccensis]
Length = 456
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQVRI+A+NFMD+VAALPAMKLDKLY+ST
Sbjct: 1 MPQVRIIAKNFMDLVAALPAMKLDKLYEST 30
>ref|XP_009392827.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 472
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQVRI+A+NFMD+VAALPAMKLDKLY+ST
Sbjct: 1 MPQVRIIAKNFMDLVAALPAMKLDKLYEST 30
>ref|XP_009392826.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 479
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQVRI+A+NFMD+VAALPAMKLDKLY+ST
Sbjct: 1 MPQVRIIAKNFMDLVAALPAMKLDKLYEST 30
>ref|XP_020247555.1| RNA polymerase II transcription factor B subunit 2 isoform X2
[Asparagus officinalis]
Length = 364
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQVRIVARNFMDMVAALPA+KLDKLY+S+
Sbjct: 1 MPQVRIVARNFMDMVAALPAVKLDKLYESS 30
>ref|XP_020247553.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Asparagus officinalis]
ref|XP_020247554.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Asparagus officinalis]
Length = 451
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQVRIVARNFMDMVAALPA+KLDKLY+S+
Sbjct: 1 MPQVRIVARNFMDMVAALPAVKLDKLYESS 30
>ref|XP_008778431.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Phoenix dactylifera]
Length = 451
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MP+VRIVA+NFMDMVAALPAMKLDKLY ST
Sbjct: 1 MPEVRIVAKNFMDMVAALPAMKLDKLYSST 30
>ref|XP_010940415.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Elaeis guineensis]
ref|XP_010940416.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Elaeis guineensis]
Length = 451
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MP+VRIVA+NFMDMVAALPAMKLDKLY ST
Sbjct: 1 MPEVRIVAKNFMDMVAALPAMKLDKLYGST 30
>gb|OVA13234.1| Transcription factor TFIIH subunit p52/Tfb2 [Macleaya cordata]
Length = 453
Score = 57.0 bits (136), Expect = 7e-07
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQV+I+A+NFMDMVAALPA+KLDKLYD+T
Sbjct: 1 MPQVKIIAKNFMDMVAALPALKLDKLYDNT 30
>ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIH
subunit 4 [Fragaria vesca subsp. vesca]
Length = 453
Score = 56.6 bits (135), Expect = 9e-07
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MP+VRI+A+NFMDMVAALPAMKLDKLYD++
Sbjct: 1 MPEVRIIAKNFMDMVAALPAMKLDKLYDNS 30
>gb|KZV53813.1| phytoene synthase, chloroplastic-like [Dorcoceras hygrometricum]
Length = 769
Score = 56.6 bits (135), Expect = 1e-06
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = -3
Query: 115 SIGESPEKMPQVRIVARNFMDMVAALPAMKLDKLYDST 2
S+ + KMPQV+IVA+NFMDMVA+LPA+KLD+LY+S+
Sbjct: 438 SVYDGKSKMPQVKIVAKNFMDMVASLPAIKLDRLYESS 475
>ref|XP_022025753.1| RNA polymerase II transcription factor B subunit 2 [Helianthus
annuus]
gb|OTF87297.1| putative transcription factor-related protein [Helianthus annuus]
Length = 452
Score = 56.2 bits (134), Expect = 1e-06
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDS 5
MPQVRI+A+NFMDMVA+LPAMKLDKLYD+
Sbjct: 1 MPQVRIIAKNFMDMVASLPAMKLDKLYDN 29
>ref|XP_009338076.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X3 [Pyrus x bretschneideri]
Length = 426
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDS 5
MPQVRI+A+NFMDMVAALPAMKLDKLY++
Sbjct: 1 MPQVRIIAKNFMDMVAALPAMKLDKLYEN 29
>gb|ONI10385.1| hypothetical protein PRUPE_4G044800 [Prunus persica]
gb|ONI10386.1| hypothetical protein PRUPE_4G044800 [Prunus persica]
Length = 449
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDS 5
MPQVRI+A+NFMDMVAALPAMKLDKLY++
Sbjct: 1 MPQVRIIAKNFMDMVAALPAMKLDKLYEN 29
>ref|XP_020581220.1| RNA polymerase II transcription factor B subunit 2-like isoform
X2 [Phalaenopsis equestris]
Length = 451
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 91 MPQVRIVARNFMDMVAALPAMKLDKLYDST 2
MPQVRIV +NFMDMVA LPAMKLDKLY+ST
Sbjct: 1 MPQVRIVPKNFMDMVAGLPAMKLDKLYEST 30