BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00026266
         (375 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase...   162   3e-44
gb|OVA13023.1| Protein of unknown function DUF408 [Macleaya cord...   131   4e-33
ref|XP_013467789.1| RNA polymerase II subunit B1 CTD phosphatase...   131   4e-33
gb|PKI44543.1| hypothetical protein CRG98_035081, partial [Punic...   128   2e-32
ref|XP_006480289.1| PREDICTED: putative RNA polymerase II subuni...   129   3e-32
gb|EOY34550.1| F2P16.20-like protein isoform 6 [Theobroma cacao]      127   5e-32
ref|XP_010042212.1| PREDICTED: putative RNA polymerase II subuni...   128   7e-32
dbj|GAY58836.1| hypothetical protein CUMW_189840 [Citrus unshiu]      128   8e-32
ref|XP_024021958.1| putative RNA polymerase II subunit B1 CTD ph...   127   8e-32
ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subuni...   127   1e-31
ref|XP_010097327.1| putative RNA polymerase II subunit B1 CTD ph...   127   1e-31
gb|EOY34548.1| F2P16.20 protein, putative isoform 4 [Theobroma c...   127   1e-31
gb|EOY34546.1| F2P16.20-like protein isoform 2 [Theobroma cacao]      127   1e-31
gb|EOY34547.1| F2P16.20-like protein isoform 3, partial [Theobro...   127   1e-31
gb|EOY34549.1| F2P16.20-like protein isoform 5 [Theobroma cacao]      127   1e-31
ref|XP_007016929.2| PREDICTED: putative RNA polymerase II subuni...   127   1e-31
gb|EOY34545.1| F2P16.20 protein, putative isoform 1 [Theobroma c...   127   1e-31
gb|OMP02460.1| hypothetical protein COLO4_11087 [Corchorus olito...   126   2e-31
ref|XP_017983793.1| PREDICTED: putative RNA polymerase II subuni...   127   2e-31
gb|OMO82815.1| hypothetical protein CCACVL1_11738 [Corchorus cap...   127   2e-31

>ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase II subunit B1 CTD
           phosphatase RPAP2 homolog [Asparagus officinalis]
          Length = 736

 Score =  162 bits (411), Expect = 3e-44
 Identities = 82/112 (73%), Positives = 91/112 (81%)
 Frame = -2

Query: 374 PSTPFDLLIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSE 195
           PSTPFDLLIAASTLL K DYDD+VTER ISDL           S +DRRRKG+YR+ALSE
Sbjct: 29  PSTPFDLLIAASTLLSKPDYDDIVTERTISDLF----------SXSDRRRKGRYRIALSE 78

Query: 194 HKVYDLQETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFGC 39
           HKVYDLQE Y+YC E CLIGSRA KGSLGDERRADVDV++ K+E+VL LFGC
Sbjct: 79  HKVYDLQEIYNYCCEECLIGSRAFKGSLGDERRADVDVRREKVEDVLRLFGC 130


>gb|OVA13023.1| Protein of unknown function DUF408 [Macleaya cordata]
          Length = 649

 Score =  131 bits (330), Expect = 4e-33
 Identities = 64/104 (61%), Positives = 82/104 (78%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L AA +L+ ++DY+DVVTER+IS++CGYPLC NPLPS  +R RKG+YR++L EHKVYDLQ
Sbjct: 30  LFAAGSLISRSDYEDVVTERSISNICGYPLCNNPLPS--ERPRKGRYRISLKEHKVYDLQ 87

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFG 42
           ETY YCS  C++ SRA  GSL DER   ++    KI+EVL+LFG
Sbjct: 88  ETYMYCSSDCVVNSRAFVGSLQDERCTVLN--SAKIDEVLNLFG 129


>ref|XP_013467789.1| RNA polymerase II subunit B1 CTD phosphatase RPAP2, putative
           [Medicago truncatula]
 gb|KEH41826.1| RNA polymerase II subunit B1 CTD phosphatase RPAP2, putative
           [Medicago truncatula]
          Length = 702

 Score =  131 bits (330), Expect = 4e-33
 Identities = 66/108 (61%), Positives = 83/108 (76%)
 Frame = -2

Query: 359 DLLIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYD 180
           D L AA +L+ K+DY+DVVTER+I++LCGYPLC N LP+  DR RKG+YR++L EHKVYD
Sbjct: 28  DQLFAAGSLISKSDYEDVVTERSITNLCGYPLCRNALPT--DRPRKGRYRISLKEHKVYD 85

Query: 179 LQETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFGCL 36
           LQETY +CS GC+I S+A  GSL DER   +DV+  K+  VL LFG L
Sbjct: 86  LQETYMFCSSGCVINSKAFAGSLQDERCQVLDVE--KLNNVLRLFGNL 131


>gb|PKI44543.1| hypothetical protein CRG98_035081, partial [Punica granatum]
          Length = 475

 Score =  128 bits (321), Expect = 2e-32
 Identities = 60/103 (58%), Positives = 80/103 (77%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L AA +++ + DY+DVVTER+I++LCGYPLCPNPLPS  DR +KG+YR++L EHKVYDL 
Sbjct: 32  LFAAGSIMSRGDYEDVVTERSITNLCGYPLCPNPLPS--DRPQKGRYRISLKEHKVYDLH 89

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLF 45
           ETY YCS GC++ SR   G+L DER + ++    K++EVL LF
Sbjct: 90  ETYMYCSSGCVVNSRTFAGTLQDERCSVLN--PAKLDEVLRLF 130


>ref|XP_006480289.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Citrus sinensis]
 ref|XP_006428243.2| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           [Citrus clementina]
          Length = 768

 Score =  129 bits (324), Expect = 3e-32
 Identities = 61/100 (61%), Positives = 77/100 (77%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+AA TL+ K+DY+DVVTER+I+DLCGYPLC NPLP    R RKG+YR++L EHKVYD++
Sbjct: 27  LLAAGTLISKSDYNDVVTERSIADLCGYPLCSNPLPPADSRTRKGRYRISLKEHKVYDVR 86

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVL 54
           E Y YCS  CL+ S+A  GSL +ER   V V + KI+EVL
Sbjct: 87  ENYLYCSTNCLVNSKAFSGSLNEER--SVVVNEKKIKEVL 124


>gb|EOY34550.1| F2P16.20-like protein isoform 6 [Theobroma cacao]
          Length = 515

 Score =  127 bits (319), Expect = 5e-32
 Identities = 62/106 (58%), Positives = 82/106 (77%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+A+ +L+ ++DY+DVVTER IS+ CGYPLC NPLPS  + RRKG+YR++L EHKVYDLQ
Sbjct: 84  LLASGSLISRSDYEDVVTERTISNTCGYPLCANPLPS--EPRRKGRYRISLKEHKVYDLQ 141

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFGCL 36
           ETY +CS  CLI SRA  GSL +ER + ++    K+ ++LSLFG L
Sbjct: 142 ETYMFCSTNCLINSRAFAGSLQEERCSVLN--HAKLNDILSLFGDL 185


>ref|XP_010042212.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Eucalyptus grandis]
 gb|KCW84978.1| hypothetical protein EUGRSUZ_B01798 [Eucalyptus grandis]
          Length = 672

 Score =  128 bits (321), Expect = 7e-32
 Identities = 63/104 (60%), Positives = 79/104 (75%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+AA  +L + DY+DVV ER+I+ LCGYPLC  PLP  ADR RKG+YR++L EH+VYDLQ
Sbjct: 33  LLAAGAILSRRDYEDVVAERSIAGLCGYPLCATPLP--ADRPRKGRYRISLKEHRVYDLQ 90

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFG 42
           ETY YCS GC++ SRA  GSL  ER A +D+   K+EEVL +FG
Sbjct: 91  ETYMYCSPGCVVDSRAFAGSLQPERCAVLDLV--KVEEVLRVFG 132


>dbj|GAY58836.1| hypothetical protein CUMW_189840 [Citrus unshiu]
          Length = 769

 Score =  128 bits (321), Expect = 8e-32
 Identities = 61/100 (61%), Positives = 76/100 (76%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+AA TL+ K+DY+DVVTER+I+DLCGYPLC NPLP    R RKG YR++L EHKVYD++
Sbjct: 27  LLAAGTLISKSDYNDVVTERSIADLCGYPLCSNPLPPADSRTRKGPYRISLKEHKVYDVR 86

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVL 54
           E Y YCS  CL+ S+A  GSL +ER   V V + KI+EVL
Sbjct: 87  ENYLYCSTNCLVNSKAFSGSLNEER--SVVVNEKKIKEVL 124


>ref|XP_024021958.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           isoform X2 [Morus notabilis]
          Length = 628

 Score =  127 bits (320), Expect = 8e-32
 Identities = 62/105 (59%), Positives = 79/105 (75%)
 Frame = -2

Query: 359 DLLIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYD 180
           D L AA +++ ++DY+DVVTER+I++LCGYPLCPNPLPS  DR RKG+YR++L EHKVYD
Sbjct: 30  DQLFAAGSIMSRSDYNDVVTERSIANLCGYPLCPNPLPS--DRPRKGRYRISLKEHKVYD 87

Query: 179 LQETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLF 45
           L ETY YCS  C+I SR    SL DER A +D    +I+ VL +F
Sbjct: 88  LHETYMYCSSDCVINSRTFAASLKDERCAVLD--SARIDAVLRMF 130


>ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Elaeis guineensis]
          Length = 681

 Score =  127 bits (320), Expect = 1e-31
 Identities = 62/103 (60%), Positives = 75/103 (72%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L AA  LL + DY+DVV ER+I+D CGYPLCPNPLP   DR  KG+YRV+L EHKVYDL+
Sbjct: 32  LFAAGALLSRPDYEDVVVERSIADHCGYPLCPNPLPH--DRPLKGRYRVSLREHKVYDLK 89

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLF 45
           ETY YCS  C+I SRA  GSL  ER +D+     K+E++L LF
Sbjct: 90  ETYKYCSPACVIASRAFAGSLSSERNSDLSA--SKVEQILELF 130


>ref|XP_010097327.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           isoform X1 [Morus notabilis]
 gb|EXB67559.1| hypothetical protein L484_006008 [Morus notabilis]
          Length = 695

 Score =  127 bits (320), Expect = 1e-31
 Identities = 62/105 (59%), Positives = 79/105 (75%)
 Frame = -2

Query: 359 DLLIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYD 180
           D L AA +++ ++DY+DVVTER+I++LCGYPLCPNPLPS  DR RKG+YR++L EHKVYD
Sbjct: 30  DQLFAAGSIMSRSDYNDVVTERSIANLCGYPLCPNPLPS--DRPRKGRYRISLKEHKVYD 87

Query: 179 LQETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLF 45
           L ETY YCS  C+I SR    SL DER A +D    +I+ VL +F
Sbjct: 88  LHETYMYCSSDCVINSRTFAASLKDERCAVLD--SARIDAVLRMF 130


>gb|EOY34548.1| F2P16.20 protein, putative isoform 4 [Theobroma cacao]
          Length = 607

 Score =  127 bits (319), Expect = 1e-31
 Identities = 62/106 (58%), Positives = 82/106 (77%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+A+ +L+ ++DY+DVVTER IS+ CGYPLC NPLPS  + RRKG+YR++L EHKVYDLQ
Sbjct: 30  LLASGSLISRSDYEDVVTERTISNTCGYPLCANPLPS--EPRRKGRYRISLKEHKVYDLQ 87

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFGCL 36
           ETY +CS  CLI SRA  GSL +ER + ++    K+ ++LSLFG L
Sbjct: 88  ETYMFCSTNCLINSRAFAGSLQEERCSVLN--HAKLNDILSLFGDL 131


>gb|EOY34546.1| F2P16.20-like protein isoform 2 [Theobroma cacao]
          Length = 679

 Score =  127 bits (319), Expect = 1e-31
 Identities = 62/106 (58%), Positives = 82/106 (77%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+A+ +L+ ++DY+DVVTER IS+ CGYPLC NPLPS  + RRKG+YR++L EHKVYDLQ
Sbjct: 84  LLASGSLISRSDYEDVVTERTISNTCGYPLCANPLPS--EPRRKGRYRISLKEHKVYDLQ 141

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFGCL 36
           ETY +CS  CLI SRA  GSL +ER + ++    K+ ++LSLFG L
Sbjct: 142 ETYMFCSTNCLINSRAFAGSLQEERCSVLN--HAKLNDILSLFGDL 185


>gb|EOY34547.1| F2P16.20-like protein isoform 3, partial [Theobroma cacao]
          Length = 703

 Score =  127 bits (319), Expect = 1e-31
 Identities = 62/106 (58%), Positives = 82/106 (77%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+A+ +L+ ++DY+DVVTER IS+ CGYPLC NPLPS  + RRKG+YR++L EHKVYDLQ
Sbjct: 84  LLASGSLISRSDYEDVVTERTISNTCGYPLCANPLPS--EPRRKGRYRISLKEHKVYDLQ 141

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFGCL 36
           ETY +CS  CLI SRA  GSL +ER + ++    K+ ++LSLFG L
Sbjct: 142 ETYMFCSTNCLINSRAFAGSLQEERCSVLN--HAKLNDILSLFGDL 185


>gb|EOY34549.1| F2P16.20-like protein isoform 5 [Theobroma cacao]
          Length = 708

 Score =  127 bits (319), Expect = 1e-31
 Identities = 62/106 (58%), Positives = 82/106 (77%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+A+ +L+ ++DY+DVVTER IS+ CGYPLC NPLPS  + RRKG+YR++L EHKVYDLQ
Sbjct: 84  LLASGSLISRSDYEDVVTERTISNTCGYPLCANPLPS--EPRRKGRYRISLKEHKVYDLQ 141

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFGCL 36
           ETY +CS  CLI SRA  GSL +ER + ++    K+ ++LSLFG L
Sbjct: 142 ETYMFCSTNCLINSRAFAGSLQEERCSVLN--HAKLNDILSLFGDL 185


>ref|XP_007016929.2| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog isoform X2 [Theobroma cacao]
          Length = 607

 Score =  127 bits (318), Expect = 1e-31
 Identities = 62/106 (58%), Positives = 82/106 (77%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+A+ +L+ ++DY+DVVTER IS+ CGYPLC NPLPS  + RRKG+YR++L EHKVYDLQ
Sbjct: 30  LLASGSLISRSDYEDVVTERTISNTCGYPLCANPLPS--EPRRKGRYRISLKEHKVYDLQ 87

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFGCL 36
           ETY +CS  CLI SRA  GSL +ER + ++    K+ ++LSLFG L
Sbjct: 88  ETYLFCSTNCLINSRAFAGSLQEERCSVLN--HAKLNDILSLFGDL 131


>gb|EOY34545.1| F2P16.20 protein, putative isoform 1 [Theobroma cacao]
          Length = 739

 Score =  127 bits (319), Expect = 1e-31
 Identities = 62/106 (58%), Positives = 82/106 (77%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+A+ +L+ ++DY+DVVTER IS+ CGYPLC NPLPS  + RRKG+YR++L EHKVYDLQ
Sbjct: 84  LLASGSLISRSDYEDVVTERTISNTCGYPLCANPLPS--EPRRKGRYRISLKEHKVYDLQ 141

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFGCL 36
           ETY +CS  CLI SRA  GSL +ER + ++    K+ ++LSLFG L
Sbjct: 142 ETYMFCSTNCLINSRAFAGSLQEERCSVLN--HAKLNDILSLFGDL 185


>gb|OMP02460.1| hypothetical protein COLO4_11087 [Corchorus olitorius]
          Length = 519

 Score =  126 bits (316), Expect = 2e-31
 Identities = 60/103 (58%), Positives = 81/103 (78%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+A+ +L+ ++DY+DVVTER I+D CGYP+CPNPLPS  + RRKG+YR++L EHKVYDLQ
Sbjct: 30  LLASGSLISRSDYEDVVTERTIADSCGYPICPNPLPS--EPRRKGRYRISLKEHKVYDLQ 87

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLF 45
           ETY +CS  CLI SRA  GSL +ER + ++  + K+  +LSLF
Sbjct: 88  ETYMFCSTDCLINSRAFAGSLQEERCSVLN--QAKLNGILSLF 128


>ref|XP_017983793.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog isoform X1 [Theobroma cacao]
          Length = 685

 Score =  127 bits (318), Expect = 2e-31
 Identities = 62/106 (58%), Positives = 82/106 (77%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+A+ +L+ ++DY+DVVTER IS+ CGYPLC NPLPS  + RRKG+YR++L EHKVYDLQ
Sbjct: 30  LLASGSLISRSDYEDVVTERTISNTCGYPLCANPLPS--EPRRKGRYRISLKEHKVYDLQ 87

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLFGCL 36
           ETY +CS  CLI SRA  GSL +ER + ++    K+ ++LSLFG L
Sbjct: 88  ETYLFCSTNCLINSRAFAGSLQEERCSVLN--HAKLNDILSLFGDL 131


>gb|OMO82815.1| hypothetical protein CCACVL1_11738 [Corchorus capsularis]
          Length = 693

 Score =  127 bits (318), Expect = 2e-31
 Identities = 61/103 (59%), Positives = 81/103 (78%)
 Frame = -2

Query: 353 LIAASTLLCKADYDDVVTERNISDLCGYPLCPNPLPSPADRRRKGKYRVALSEHKVYDLQ 174
           L+A+ +L+ ++DY+DVVTER I+D CGYPLCPNPLPS  + RRKG+YR++L EHKVYDLQ
Sbjct: 30  LLASGSLISRSDYEDVVTERTIADSCGYPLCPNPLPS--EPRRKGRYRISLKEHKVYDLQ 87

Query: 173 ETYSYCSEGCLIGSRALKGSLGDERRADVDVKKGKIEEVLSLF 45
           ETY +CS  CLI SRA  GSL +ER + ++  + K+  +LSLF
Sbjct: 88  ETYMFCSTDCLINSRAFAGSLQEERCSVLN--QAKLNGILSLF 128