BLASTX nr result

ID: Ophiopogon26_contig00026026 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00026026
         (445 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020259982.1| uncharacterized protein LOC109836484 isoform...   110   3e-25
ref|XP_020259981.1| uncharacterized protein LOC109836484 isoform...   110   3e-25
ref|XP_020259980.1| uncharacterized protein LOC109836484 isoform...   110   3e-25
ref|XP_020259979.1| E3 ubiquitin-protein ligase RNF6 isoform X2 ...   110   3e-25
ref|XP_020259977.1| E3 ubiquitin-protein ligase RNF6 isoform X1 ...   110   3e-25

>ref|XP_020259982.1| uncharacterized protein LOC109836484 isoform X5 [Asparagus
           officinalis]
          Length = 698

 Score =  110 bits (275), Expect = 3e-25
 Identities = 74/160 (46%), Positives = 94/160 (58%), Gaps = 13/160 (8%)
 Frame = -2

Query: 444 NIVLELPDTPDRLATGCLVGRSPKPSLERINFRWDVNPSCDPVRRACVSCGRQSNHHTLI 265
           N++LE+PDTPDR  T  L       S    NF+ D  P+  P+ RA ++  R SN H  +
Sbjct: 40  NMILEVPDTPDRTTTRHLT------SSRGNNFKLDGIPNYSPLTRAGLN-SRHSNRHNSV 92

Query: 264 GXXXXXXXXXXXFREANLARQLSDTTGTKPSSESQSRPLELGHARLSNGSPRSRQTID-- 91
           G           F EANLARQLS T+  KPS ESQS+PLE GHA++S+GS RSR+TID  
Sbjct: 93  GISNASDDADFYFLEANLARQLSRTSEAKPSFESQSKPLEPGHAKISDGSARSRRTIDLS 152

Query: 90  -----------LSENRIALSPSVSEDKKIVKLYEDTAGLK 4
                      LSEN I +SPS ++DKKI +L  + AGLK
Sbjct: 153 CKSPVVENVCSLSENCITISPS-ADDKKIEELRGNNAGLK 191


>ref|XP_020259981.1| uncharacterized protein LOC109836484 isoform X4 [Asparagus
           officinalis]
          Length = 715

 Score =  110 bits (275), Expect = 3e-25
 Identities = 74/160 (46%), Positives = 94/160 (58%), Gaps = 13/160 (8%)
 Frame = -2

Query: 444 NIVLELPDTPDRLATGCLVGRSPKPSLERINFRWDVNPSCDPVRRACVSCGRQSNHHTLI 265
           N++LE+PDTPDR  T  L       S    NF+ D  P+  P+ RA ++  R SN H  +
Sbjct: 40  NMILEVPDTPDRTTTRHLT------SSRGNNFKLDGIPNYSPLTRAGLN-SRHSNRHNSV 92

Query: 264 GXXXXXXXXXXXFREANLARQLSDTTGTKPSSESQSRPLELGHARLSNGSPRSRQTID-- 91
           G           F EANLARQLS T+  KPS ESQS+PLE GHA++S+GS RSR+TID  
Sbjct: 93  GISNASDDADFYFLEANLARQLSRTSEAKPSFESQSKPLEPGHAKISDGSARSRRTIDLS 152

Query: 90  -----------LSENRIALSPSVSEDKKIVKLYEDTAGLK 4
                      LSEN I +SPS ++DKKI +L  + AGLK
Sbjct: 153 CKSPVVENVCSLSENCITISPS-ADDKKIEELRGNNAGLK 191


>ref|XP_020259980.1| uncharacterized protein LOC109836484 isoform X3 [Asparagus
           officinalis]
 gb|ONK70930.1| uncharacterized protein A4U43_C04F2980 [Asparagus officinalis]
          Length = 725

 Score =  110 bits (275), Expect = 3e-25
 Identities = 74/160 (46%), Positives = 94/160 (58%), Gaps = 13/160 (8%)
 Frame = -2

Query: 444 NIVLELPDTPDRLATGCLVGRSPKPSLERINFRWDVNPSCDPVRRACVSCGRQSNHHTLI 265
           N++LE+PDTPDR  T  L       S    NF+ D  P+  P+ RA ++  R SN H  +
Sbjct: 40  NMILEVPDTPDRTTTRHLT------SSRGNNFKLDGIPNYSPLTRAGLN-SRHSNRHNSV 92

Query: 264 GXXXXXXXXXXXFREANLARQLSDTTGTKPSSESQSRPLELGHARLSNGSPRSRQTID-- 91
           G           F EANLARQLS T+  KPS ESQS+PLE GHA++S+GS RSR+TID  
Sbjct: 93  GISNASDDADFYFLEANLARQLSRTSEAKPSFESQSKPLEPGHAKISDGSARSRRTIDLS 152

Query: 90  -----------LSENRIALSPSVSEDKKIVKLYEDTAGLK 4
                      LSEN I +SPS ++DKKI +L  + AGLK
Sbjct: 153 CKSPVVENVCSLSENCITISPS-ADDKKIEELRGNNAGLK 191


>ref|XP_020259979.1| E3 ubiquitin-protein ligase RNF6 isoform X2 [Asparagus officinalis]
          Length = 731

 Score =  110 bits (275), Expect = 3e-25
 Identities = 74/160 (46%), Positives = 94/160 (58%), Gaps = 13/160 (8%)
 Frame = -2

Query: 444 NIVLELPDTPDRLATGCLVGRSPKPSLERINFRWDVNPSCDPVRRACVSCGRQSNHHTLI 265
           N++LE+PDTPDR  T  L       S    NF+ D  P+  P+ RA ++  R SN H  +
Sbjct: 40  NMILEVPDTPDRTTTRHLT------SSRGNNFKLDGIPNYSPLTRAGLN-SRHSNRHNSV 92

Query: 264 GXXXXXXXXXXXFREANLARQLSDTTGTKPSSESQSRPLELGHARLSNGSPRSRQTID-- 91
           G           F EANLARQLS T+  KPS ESQS+PLE GHA++S+GS RSR+TID  
Sbjct: 93  GISNASDDADFYFLEANLARQLSRTSEAKPSFESQSKPLEPGHAKISDGSARSRRTIDLS 152

Query: 90  -----------LSENRIALSPSVSEDKKIVKLYEDTAGLK 4
                      LSEN I +SPS ++DKKI +L  + AGLK
Sbjct: 153 CKSPVVENVCSLSENCITISPS-ADDKKIEELRGNNAGLK 191


>ref|XP_020259977.1| E3 ubiquitin-protein ligase RNF6 isoform X1 [Asparagus officinalis]
 ref|XP_020259978.1| E3 ubiquitin-protein ligase RNF6 isoform X1 [Asparagus officinalis]
          Length = 741

 Score =  110 bits (275), Expect = 3e-25
 Identities = 74/160 (46%), Positives = 94/160 (58%), Gaps = 13/160 (8%)
 Frame = -2

Query: 444 NIVLELPDTPDRLATGCLVGRSPKPSLERINFRWDVNPSCDPVRRACVSCGRQSNHHTLI 265
           N++LE+PDTPDR  T  L       S    NF+ D  P+  P+ RA ++  R SN H  +
Sbjct: 40  NMILEVPDTPDRTTTRHLT------SSRGNNFKLDGIPNYSPLTRAGLN-SRHSNRHNSV 92

Query: 264 GXXXXXXXXXXXFREANLARQLSDTTGTKPSSESQSRPLELGHARLSNGSPRSRQTID-- 91
           G           F EANLARQLS T+  KPS ESQS+PLE GHA++S+GS RSR+TID  
Sbjct: 93  GISNASDDADFYFLEANLARQLSRTSEAKPSFESQSKPLEPGHAKISDGSARSRRTIDLS 152

Query: 90  -----------LSENRIALSPSVSEDKKIVKLYEDTAGLK 4
                      LSEN I +SPS ++DKKI +L  + AGLK
Sbjct: 153 CKSPVVENVCSLSENCITISPS-ADDKKIEELRGNNAGLK 191


Top