BLASTX nr result

ID: Ophiopogon26_contig00025928 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00025928
         (901 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK69394.1| uncharacterized protein A4U43_C05F22400 [Asparagu...    75   2e-11
ref|XP_020264405.1| LOW QUALITY PROTEIN: PHD and RING finger dom...    75   2e-11

>gb|ONK69394.1| uncharacterized protein A4U43_C05F22400 [Asparagus officinalis]
          Length = 629

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 60/161 (37%), Positives = 77/161 (47%)
 Frame = +1

Query: 1   VLNNSSNLSPXXXXXXXXXXXXXXXXFLSKGYSAPRGTAGHTAFNLGNKQHECPVHDKVY 180
           VLN+SS +                  F+SK    P G  G TA  + +KQH+C  H K  
Sbjct: 366 VLNHSSPVCAKRNSISKDTINHNTSSFVSKH---PNGLNGCTALFV-DKQHKCLGHQKSC 421

Query: 181 IEKNMDVAKDDHKGPIKVPQGDIVESSSHKLVGVSSTESVHCQKKPTPNQVVDGGSLSVS 360
           IEK M + +  +   I V Q D  ESS HK+  VSS E   CQKKPTP Q          
Sbjct: 422 IEKEMGIMEHFNGWAIGVTQ-DSKESSHHKISRVSSQEGPSCQKKPTPLQ---------- 470

Query: 361 KGLDALNSQGSAPCSLSQRSSLPAMDPIVSSCDIVHSHDTK 483
              + LN   SA C+ S +SSLP  +P+     +V+SHD K
Sbjct: 471 ---NVLNCPSSASCAPSVQSSLPTNNPV----SVVNSHDKK 504



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 53/138 (38%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
 Frame = +1

Query: 496 IVKHFHKRPIEIPRGNIMESSSQKLGGVSSKGSVRCQKKPSSQQVADDRSLSASKGWDAL 675
           I++HF+   I + + +  ESS  K+  VSS+    CQKKP+  Q             + L
Sbjct: 428 IMEHFNGWAIGVTQDS-KESSHHKISRVSSQEGPSCQKKPTPLQ-------------NVL 473

Query: 676 NCRDSVPCSLSGWSSLPAMNPIISSCGVVNT---KHGTVSSVDKXXXXXXXXXXXXAKDE 846
           NC  S  C+ S  SSLP  NP+     VVN+   K   V S DK            AK E
Sbjct: 474 NCPSSASCAPSVQSSLPTNNPV----SVVNSHDKKRSEVRSADKNYIRRDNMKCS-AKVE 528

Query: 847 VRSLVKLNLKLESKDQRL 900
           ++ LVKLNLKL+SKD RL
Sbjct: 529 IQYLVKLNLKLQSKDYRL 546


>ref|XP_020264405.1| LOW QUALITY PROTEIN: PHD and RING finger domain-containing protein
           C126.07c-like [Asparagus officinalis]
          Length = 671

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 60/161 (37%), Positives = 77/161 (47%)
 Frame = +1

Query: 1   VLNNSSNLSPXXXXXXXXXXXXXXXXFLSKGYSAPRGTAGHTAFNLGNKQHECPVHDKVY 180
           VLN+SS +                  F+SK    P G  G TA  + +KQH+C  H K  
Sbjct: 408 VLNHSSPVCAKRNSISKDTINHNTSSFVSKH---PNGLNGCTALFV-DKQHKCLGHQKSC 463

Query: 181 IEKNMDVAKDDHKGPIKVPQGDIVESSSHKLVGVSSTESVHCQKKPTPNQVVDGGSLSVS 360
           IEK M + +  +   I V Q D  ESS HK+  VSS E   CQKKPTP Q          
Sbjct: 464 IEKEMGIMEHFNGWAIGVTQ-DSKESSHHKISRVSSQEGPSCQKKPTPLQ---------- 512

Query: 361 KGLDALNSQGSAPCSLSQRSSLPAMDPIVSSCDIVHSHDTK 483
              + LN   SA C+ S +SSLP  +P+     +V+SHD K
Sbjct: 513 ---NVLNCPSSASCAPSVQSSLPTNNPV----SVVNSHDKK 546



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 53/138 (38%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
 Frame = +1

Query: 496 IVKHFHKRPIEIPRGNIMESSSQKLGGVSSKGSVRCQKKPSSQQVADDRSLSASKGWDAL 675
           I++HF+   I + + +  ESS  K+  VSS+    CQKKP+  Q             + L
Sbjct: 470 IMEHFNGWAIGVTQDS-KESSHHKISRVSSQEGPSCQKKPTPLQ-------------NVL 515

Query: 676 NCRDSVPCSLSGWSSLPAMNPIISSCGVVNT---KHGTVSSVDKXXXXXXXXXXXXAKDE 846
           NC  S  C+ S  SSLP  NP+     VVN+   K   V S DK            AK E
Sbjct: 516 NCPSSASCAPSVQSSLPTNNPV----SVVNSHDKKRSEVRSADKNYIRRDNMKCS-AKVE 570

Query: 847 VRSLVKLNLKLESKDQRL 900
           ++ LVKLNLKL+SKD RL
Sbjct: 571 IQYLVKLNLKLQSKDYRL 588


Top