BLASTX nr result

ID: Ophiopogon26_contig00025826 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00025826
         (381 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020277382.1| protein CHROMATIN REMODELING 35 [Asparagus o...   120   3e-29
ref|XP_020087221.1| protein CHROMATIN REMODELING 35 [Ananas como...    60   5e-08

>ref|XP_020277382.1| protein CHROMATIN REMODELING 35 [Asparagus officinalis]
 gb|ONK59645.1| uncharacterized protein A4U43_C08F8750 [Asparagus officinalis]
          Length = 928

 Score =  120 bits (302), Expect = 3e-29
 Identities = 69/126 (54%), Positives = 87/126 (69%)
 Frame = -3

Query: 379 CSGSQMLSQAYRVTPSNPSSMYQQSGDVIDLEEPKEPESKTGNDVMTAIVLDSDDEDGNR 200
           C G Q LSQ+Y VT S PS   ++  DVIDLEEP+E + KTG D M+ IV+DSDDEDG++
Sbjct: 62  CLGPQKLSQSYVVTESEPSPGSKEMKDVIDLEEPQESKDKTGADTMSVIVVDSDDEDGSQ 121

Query: 199 HEQNMQPSSSDRLLDFRAWLSSQIEERLKRNRLSAGAANSALQVSDEQAIAIEGKRPPSI 20
             Q  QPS    L DFRAWL+SQ+ ERL++N+    A++S L +S     AIE K+ PSI
Sbjct: 122 QVQK-QPS----LHDFRAWLNSQMAERLRKNKSPLVASDSILPLSCVPGNAIEAKKLPSI 176

Query: 19  QYEKVV 2
           QYEKVV
Sbjct: 177 QYEKVV 182


>ref|XP_020087221.1| protein CHROMATIN REMODELING 35 [Ananas comosus]
 ref|XP_020087222.1| protein CHROMATIN REMODELING 35 [Ananas comosus]
          Length = 964

 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
 Frame = -3

Query: 253 NDVMTAIVLDSDDEDGNRHEQNMQP-SSSDRLLDFRAWLSSQIEERLKRNRLSAGAAN-- 83
           ND+ + I++DSD+EDG+R E +  P    +R LDFR+WL   I ER+K+ ++   AAN  
Sbjct: 145 NDIESPIIIDSDEEDGSRQEGSKNPVHPENRTLDFRSWLERSIYERVKQVKMMGQAANDY 204

Query: 82  --SALQVSDEQAIAIEGKRPPSIQYEKVV 2
                 ++     A E    PSIQY+ VV
Sbjct: 205 KFDQTNLNLVGQTASEASCEPSIQYQMVV 233


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