BLASTX nr result

ID: Ophiopogon26_contig00025825 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00025825
         (381 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020277382.1| protein CHROMATIN REMODELING 35 [Asparagus o...   120   3e-29
ref|XP_020087221.1| protein CHROMATIN REMODELING 35 [Ananas como...    59   2e-07
ref|XP_010917669.1| PREDICTED: protein CHROMATIN REMODELING 35-l...    58   4e-07

>ref|XP_020277382.1| protein CHROMATIN REMODELING 35 [Asparagus officinalis]
 gb|ONK59645.1| uncharacterized protein A4U43_C08F8750 [Asparagus officinalis]
          Length = 928

 Score =  120 bits (302), Expect = 3e-29
 Identities = 68/126 (53%), Positives = 88/126 (69%)
 Frame = -3

Query: 379 CSGSQMLSQAYRVTPSNPSSMYQQIGYVIDLEEPKEPESKTGNDVTTAIVLDSDDEDGNR 200
           C G Q LSQ+Y VT S PS   +++  VIDLEEP+E + KTG D  + IV+DSDDEDG++
Sbjct: 62  CLGPQKLSQSYVVTESEPSPGSKEMKDVIDLEEPQESKDKTGADTMSVIVVDSDDEDGSQ 121

Query: 199 HEQNMQPSSSDRLHDFRAWLSSQIAERLKRNRLSAGAANSALQVTDEQAIAIEGKRPPSI 20
             Q  QPS    LHDFRAWL+SQ+AERL++N+    A++S L ++     AIE K+ PSI
Sbjct: 122 QVQK-QPS----LHDFRAWLNSQMAERLRKNKSPLVASDSILPLSCVPGNAIEAKKLPSI 176

Query: 19  QYEKVV 2
           QYEKVV
Sbjct: 177 QYEKVV 182


>ref|XP_020087221.1| protein CHROMATIN REMODELING 35 [Ananas comosus]
 ref|XP_020087222.1| protein CHROMATIN REMODELING 35 [Ananas comosus]
          Length = 964

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
 Frame = -3

Query: 253 NDVTTAIVLDSDDEDGNRHEQNMQP-SSSDRLHDFRAWLSSQIAERLKRNRLSAGAANS- 80
           ND+ + I++DSD+EDG+R E +  P    +R  DFR+WL   I ER+K+ ++   AAN  
Sbjct: 145 NDIESPIIIDSDEEDGSRQEGSKNPVHPENRTLDFRSWLERSIYERVKQVKMMGQAANDY 204

Query: 79  ALQVTDEQAI---AIEGKRPPSIQYEKVV 2
               T+   +   A E    PSIQY+ VV
Sbjct: 205 KFDQTNLNLVGQTASEASCEPSIQYQMVV 233


>ref|XP_010917669.1| PREDICTED: protein CHROMATIN REMODELING 35-like isoform X1 [Elaeis
           guineensis]
 ref|XP_010917670.1| PREDICTED: protein CHROMATIN REMODELING 35-like isoform X1 [Elaeis
           guineensis]
          Length = 988

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
 Frame = -3

Query: 343 VTPSNPSSMYQQIGYVIDLEEPKEPESKTGNDVTTAIVLDSDDEDGNRHEQNMQPSSSD- 167
           V  ++ S+M +++ ++        P++K   + T+ I++DSDDEDG   +       S+ 
Sbjct: 135 VEGNSDSTMQKKMRHITSGSSYLCPKTKEHKNKTSVIIIDSDDEDGVCRKGTKNSCISEC 194

Query: 166 RLHDFRAWLSSQIAERLKRNRLSA-------GAANSALQVTDEQAIAIEGKRPPSIQYEK 8
           ++H+F+AWLSS++   L++  L A        AA+    V      A  GK PPS+QYE 
Sbjct: 195 QVHEFQAWLSSELHLCLRQAGLLAWDGHSNQPAASERKNVKFAHDFAATGKVPPSVQYEA 254

Query: 7   VV 2
           VV
Sbjct: 255 VV 256


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