BLASTX nr result
ID: Ophiopogon26_contig00025780
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00025780
(1501 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020265555.1| RNA pseudouridine synthase 4, mitochondrial ... 638 0.0
ref|XP_008812838.1| PREDICTED: RNA pseudouridine synthase 4, mit... 516 e-177
ref|XP_010943215.1| PREDICTED: RNA pseudouridine synthase 4, mit... 504 e-172
ref|XP_009396599.1| PREDICTED: RNA pseudouridine synthase 4, mit... 502 e-172
ref|XP_010943216.1| PREDICTED: RNA pseudouridine synthase 4, mit... 494 e-169
ref|XP_020685526.1| RNA pseudouridine synthase 4, mitochondrial-... 488 e-166
ref|XP_020592021.1| RNA pseudouridine synthase 4, mitochondrial ... 472 e-160
ref|XP_018827853.1| PREDICTED: RNA pseudouridine synthase 4, mit... 471 e-160
ref|XP_015892750.1| PREDICTED: RNA pseudouridine synthase 4, mit... 468 e-158
gb|PKA54095.1| RNA pseudouridine synthase 4, mitochondrial [Apos... 466 e-158
ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mit... 466 e-157
ref|XP_020592022.1| RNA pseudouridine synthase 4, mitochondrial ... 464 e-157
ref|XP_023924555.1| RNA pseudouridine synthase 4, mitochondrial ... 465 e-157
ref|XP_020592020.1| RNA pseudouridine synthase 4, mitochondrial ... 464 e-157
ref|XP_019225818.1| PREDICTED: RNA pseudouridine synthase 4, mit... 463 e-157
ref|XP_022749157.1| RNA pseudouridine synthase 4, mitochondrial ... 462 e-156
ref|XP_020102939.1| RNA pseudouridine synthase 4, mitochondrial-... 462 e-156
gb|OAY82176.1| RNA pseudouridine synthase 4, mitochondrial [Anan... 462 e-156
gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theob... 460 e-155
ref|XP_020592024.1| RNA pseudouridine synthase 4, mitochondrial ... 459 e-155
>ref|XP_020265555.1| RNA pseudouridine synthase 4, mitochondrial [Asparagus officinalis]
gb|ONK70293.1| uncharacterized protein A4U43_C05F32240 [Asparagus officinalis]
Length = 453
Score = 638 bits (1645), Expect = 0.0
Identities = 328/458 (71%), Positives = 368/458 (80%)
Frame = +1
Query: 7 LCRRTALSSTTFQILRSSTLLHRSPYSNXXXXXXXXXXREHTNGDDTFQKWVTLPPFAPH 186
L R+ SS+TFQ+LRS L+ + S RE G D F KWVTLPPF+P
Sbjct: 11 LWTRSQTSSSTFQVLRS---LYSATTSQD---------REQA-GQDNFHKWVTLPPFSPQ 57
Query: 187 MDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDC 366
MDA SIG+EIAGR +G+GEP+TALKWVRRCCP LP SLVQKLFRLRQVRKEL +S
Sbjct: 58 MDASSIGREIAGRNPIGRGEPITALKWVRRCCPQLPMSLVQKLFRLRQVRKELANSNQLF 117
Query: 367 AEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCSTDETEIGFIRSLVLYKDP 546
E E KQ K KRVSAKDTL SGD+ILLPITVQ+LV ETKD S++E E+ F+RSLVLYKDP
Sbjct: 118 TEEEVKQKKIKRVSAKDTLDSGDVILLPITVQELVPETKDSSSNEDEVKFMRSLVLYKDP 177
Query: 547 AIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQT 726
IIV+NKPPG+PVQGGVGIK+S+D L AM+LKYDYSEPPRLVHRLDRESSG+LV+GRTQT
Sbjct: 178 DIIVLNKPPGLPVQGGVGIKYSVDALAAMALKYDYSEPPRLVHRLDRESSGVLVLGRTQT 237
Query: 727 SASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGK 906
SA+ILH+IFR+KTS V +D+ +Q+ LQKKYWALVIG PRL KG I APLAKIVLEDGK
Sbjct: 238 SAAILHSIFRDKTSEVESNDVNDVQKVLQKKYWALVIGIPRLLKGLISAPLAKIVLEDGK 297
Query: 907 SDRITIARDESTPSQHALTEYKVIRSAHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGD 1086
SDRITIARD STPSQHALTEYKVIRSA+GY+WLEL PLTGRKHQLRVHCAEALGTPIVGD
Sbjct: 298 SDRITIARDVSTPSQHALTEYKVIRSANGYSWLELHPLTGRKHQLRVHCAEALGTPIVGD 357
Query: 1087 YKYGWKAHRNLEPMPCVQPKVEHHELPFGLESGGGSISDKQPRLHLHCREMILPNIATAL 1266
YKYGWKAHRNLEP+P +Q + EH LPFGLES GGSISDK+PR+HLHCREM LPNIA+A+
Sbjct: 358 YKYGWKAHRNLEPVPSLQSEFEHEMLPFGLESQGGSISDKEPRMHLHCREMTLPNIASAM 417
Query: 1267 QQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESWEILNY 1380
QQ VAPVP YMKESWEILNY
Sbjct: 418 QQ--LESSTNLDLSKIDVLDLVAPVPWYMKESWEILNY 453
>ref|XP_008812838.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Phoenix
dactylifera]
Length = 476
Score = 516 bits (1330), Expect = e-177
Identities = 271/425 (63%), Positives = 319/425 (75%), Gaps = 7/425 (1%)
Frame = +1
Query: 124 EHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIA-GRKTMGKGEPVTALKWVRRCCPHLPAS 300
E G +W+TLPPFAP +DA S+GK IA GR+ G GEP TALKWVRRCC HLP S
Sbjct: 51 EEAGGGQQKGRWLTLPPFAPPVDASSVGKAIARGRRPAGDGEPTTALKWVRRCCSHLPMS 110
Query: 301 LVQKLFRLRQVRKELVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTET 480
LVQKLFRLRQVR++L + G ++ + Q + +RVSAKD ++ GD+ILLP+TVQ + T+
Sbjct: 111 LVQKLFRLRQVRRDLTKN-GSNMDSHSAQQQLRRVSAKDVMMPGDVILLPVTVQNVATKK 169
Query: 481 KDCSTDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEP 660
D S E EI FI SL LYKD AII +NKPPGMPVQGGVGIK+SMD L A S KYD+ E
Sbjct: 170 YDYSESEKEISFIHSLELYKDSAIIAVNKPPGMPVQGGVGIKYSMDALAAKSFKYDFPES 229
Query: 661 PRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIG 840
PRLVHRLDR+SSG+LV+GRTQTSA ILH+IFREKTSG DDI++ +R LQ+KY ALVIG
Sbjct: 230 PRLVHRLDRDSSGVLVLGRTQTSALILHSIFREKTSGALSDDIKTTRRTLQRKYLALVIG 289
Query: 841 TPRLSKGRIPAPLAKIVLEDGKSDRITIAR-DESTPSQHALTEYKVIR-SAHGYTWLELR 1014
TP+ SKG I APLAKIVLEDGKS+RITI +ST S HALTEY+VIR SAHG+TWLEL
Sbjct: 290 TPKHSKGLISAPLAKIVLEDGKSERITIVMGTKSTSSHHALTEYRVIRSSAHGFTWLELC 349
Query: 1015 PLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHHEL----PFGLES 1182
PLTGRKHQLRVHCAEALGTPIVGDYKYGW AHR EPMP + E +L PFGL+
Sbjct: 350 PLTGRKHQLRVHCAEALGTPIVGDYKYGWYAHRKWEPMPWPESMSEDEKLPKKRPFGLDL 409
Query: 1183 GGGSISDKQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKES 1362
GGSI++KQP LHLHC++MILPNI+ AL Q VAP+P +M+ES
Sbjct: 410 DGGSIAEKQPYLHLHCKQMILPNISAALCQ-LQSSAVDHDFSKLEKINLVAPLPLHMQES 468
Query: 1363 WEILN 1377
W+IL+
Sbjct: 469 WDILS 473
>ref|XP_010943215.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Elaeis guineensis]
Length = 478
Score = 504 bits (1297), Expect = e-172
Identities = 276/474 (58%), Positives = 331/474 (69%), Gaps = 16/474 (3%)
Frame = +1
Query: 4 HLCRRTALSSTTFQIL--------RSSTLLHRSPYSNXXXXXXXXXXREHTNGDDTFQKW 159
HL RT + +TT +++ ++T+ S YS+ E +W
Sbjct: 11 HLSSRTRVLATTLELIVAVFQRCSYTTTIAASSSYSSAR--------EEEAGWRKEKGRW 62
Query: 160 VTLPPFAPHMDAPSIGKEIA-GRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVR 336
+TLPPFAP +DA + K IA G++ G+ EP TALKWVRRCCPHLP SLVQKLFRLRQVR
Sbjct: 63 LTLPPFAPPVDASYVRKAIASGQRPAGEEEPTTALKWVRRCCPHLPMSLVQKLFRLRQVR 122
Query: 337 KELVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCSTDETEIGF 516
++L + G + Q + +RVSAKD ++ GD+ILLP+TVQ + T+ D S E EI F
Sbjct: 123 RDLTKN-GSHMDGYYGQQQLRRVSAKDVMMPGDVILLPVTVQNVATKKYDYSESEEEISF 181
Query: 517 IRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESS 696
IRSL LYKD AII +NKPPGMPVQGGVGIK+SMD L A S KYDY E PRLVHRLDR+SS
Sbjct: 182 IRSLELYKDSAIIAVNKPPGMPVQGGVGIKYSMDALAAKSFKYDYPESPRLVHRLDRDSS 241
Query: 697 GILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGTPRLSKGRIPAP 876
G+LV+GRTQTSA +LH+IFREKTSG DDI++ RALQ+KY ALVIGTP+ KG I AP
Sbjct: 242 GVLVLGRTQTSALVLHSIFREKTSGALSDDIKTTCRALQRKYLALVIGTPKRWKGLISAP 301
Query: 877 LAKIVLEDGKSDRITIARDEST-PSQHALTEYKVIR-SAHGYTWLELRPLTGRKHQLRVH 1050
L KIVLEDGKS+RITI +D T S HALTEY+VIR SAHG+TWLEL PLTGRKHQLRVH
Sbjct: 302 LTKIVLEDGKSERITIVKDTKTASSHHALTEYQVIRSSAHGFTWLELCPLTGRKHQLRVH 361
Query: 1051 CAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHHEL-----PFGLESGGGSISDKQPR 1215
AEALGTPIVGDYKYGW AHR EPMP + E +L PFGLE GGSI++KQP
Sbjct: 362 LAEALGTPIVGDYKYGWYAHRKWEPMPWPESMSEDEKLPKNKPPFGLELDGGSIAEKQPF 421
Query: 1216 LHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESWEILN 1377
LHLHC++MILPNI+ AL Q VAP+P +M+ SW+IL+
Sbjct: 422 LHLHCKQMILPNISAALWQ-LQSSSVDHDFLELEKLNLVAPLPLHMRVSWDILS 474
>ref|XP_009396599.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Musa
acuminata subsp. malaccensis]
Length = 469
Score = 502 bits (1293), Expect = e-172
Identities = 263/418 (62%), Positives = 314/418 (75%), Gaps = 10/418 (2%)
Frame = +1
Query: 154 KWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQV 333
KW+TLPPF+P +D S+GKE+AGR+ + + EP++ALKWVRRCCPHLP SLV KLFRLRQV
Sbjct: 53 KWLTLPPFSPPIDCVSVGKELAGRRPVAETEPMSALKWVRRCCPHLPMSLVHKLFRLRQV 112
Query: 334 RKELVDSA---GDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCST-DE 501
R++ G+ AE Q + +RVS KD ++ G++I LP++VQ L TE S ++
Sbjct: 113 RRDQTAQVVYNGNATPAE--QGRLRRVSVKDAMMPGEVIFLPVSVQNLTTEGSYRSKYND 170
Query: 502 TEIGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRL 681
EI F+RSL LYKD AIIV+NKPPGMPVQGGVGI++SMD L A LKY+ SEPPRLVHRL
Sbjct: 171 VEISFVRSLELYKDEAIIVVNKPPGMPVQGGVGIRYSMDALAANCLKYECSEPPRLVHRL 230
Query: 682 DRESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGTPRLSKG 861
DR+SSG+LV+GRTQTSA+ILH++FREKTSG DDI QR LQ+KY ALVIGTPR SKG
Sbjct: 231 DRDSSGVLVLGRTQTSATILHSLFREKTSGALADDINVTQRPLQRKYLALVIGTPRHSKG 290
Query: 862 RIPAPLAKIVLEDGKSDRITIARD-ESTPSQHALTEYKVIRSAHGYTWLELRPLTGRKHQ 1038
I APLAKIVLEDGKS+RI IA D +S SQHALTEYKVIRS+H YTWLEL PLTGRKHQ
Sbjct: 291 LISAPLAKIVLEDGKSERIIIADDGKSASSQHALTEYKVIRSSHDYTWLELFPLTGRKHQ 350
Query: 1039 LRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQ-----PKVEHHELPFGLESGGGSISD 1203
LRVHCAE LGTPIVGD+KYG AHR EPM + K+ +LPFGLE GGSIS+
Sbjct: 351 LRVHCAEVLGTPIVGDHKYGRHAHRKWEPMRLPESIIKGEKIPKEKLPFGLELDGGSISE 410
Query: 1204 KQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESWEILN 1377
K P LHLHC++M+LPNI+ ALQQ VAP+PS+M+ SWEIL+
Sbjct: 411 KLPGLHLHCKQMVLPNISVALQQ--LQSSTDHDFSKVEKLNLVAPLPSHMQRSWEILS 466
>ref|XP_010943216.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
[Elaeis guineensis]
Length = 475
Score = 494 bits (1272), Expect = e-169
Identities = 274/474 (57%), Positives = 328/474 (69%), Gaps = 16/474 (3%)
Frame = +1
Query: 4 HLCRRTALSSTTFQIL--------RSSTLLHRSPYSNXXXXXXXXXXREHTNGDDTFQKW 159
HL RT + +TT +++ ++T+ S YS+ E +W
Sbjct: 11 HLSSRTRVLATTLELIVAVFQRCSYTTTIAASSSYSSAR--------EEEAGWRKEKGRW 62
Query: 160 VTLPPFAPHMDAPSIGKEIA-GRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVR 336
+TLPPFAP +DA + K IA G++ G+ EP TALKWVRRCCPHLP SLVQKLFRLRQVR
Sbjct: 63 LTLPPFAPPVDASYVRKAIASGQRPAGEEEPTTALKWVRRCCPHLPMSLVQKLFRLRQVR 122
Query: 337 KELVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCSTDETEIGF 516
++L + G + Q + +RVSAKD ++ GD+ILLP+TVQ + T+ D S E EI F
Sbjct: 123 RDLTKN-GSHMDGYYGQQQLRRVSAKDVMMPGDVILLPVTVQNVATKKYDYSESEEEISF 181
Query: 517 IRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESS 696
IRSL LYKD AII +NKPPGMPVQGGVGIK+SMD L A S KYDY E PRLVHRLDR+SS
Sbjct: 182 IRSLELYKDSAIIAVNKPPGMPVQGGVGIKYSMDALAAKSFKYDYPESPRLVHRLDRDSS 241
Query: 697 GILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGTPRLSKGRIPAP 876
G+LV+GRTQTSA +LH+IFREKTSG D + RALQ+KY ALVIGTP+ KG I AP
Sbjct: 242 GVLVLGRTQTSALVLHSIFREKTSGALSD---TTCRALQRKYLALVIGTPKRWKGLISAP 298
Query: 877 LAKIVLEDGKSDRITIARDEST-PSQHALTEYKVIR-SAHGYTWLELRPLTGRKHQLRVH 1050
L KIVLEDGKS+RITI +D T S HALTEY+VIR SAHG+TWLEL PLTGRKHQLRVH
Sbjct: 299 LTKIVLEDGKSERITIVKDTKTASSHHALTEYQVIRSSAHGFTWLELCPLTGRKHQLRVH 358
Query: 1051 CAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHHEL-----PFGLESGGGSISDKQPR 1215
AEALGTPIVGDYKYGW AHR EPMP + E +L PFGLE GGSI++KQP
Sbjct: 359 LAEALGTPIVGDYKYGWYAHRKWEPMPWPESMSEDEKLPKNKPPFGLELDGGSIAEKQPF 418
Query: 1216 LHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESWEILN 1377
LHLHC++MILPNI+ AL Q VAP+P +M+ SW+IL+
Sbjct: 419 LHLHCKQMILPNISAALWQ-LQSSSVDHDFLELEKLNLVAPLPLHMRVSWDILS 471
>ref|XP_020685526.1| RNA pseudouridine synthase 4, mitochondrial-like [Dendrobium
catenatum]
Length = 468
Score = 488 bits (1257), Expect = e-166
Identities = 250/421 (59%), Positives = 307/421 (72%), Gaps = 5/421 (1%)
Frame = +1
Query: 133 NGDDTFQK----WVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPAS 300
NGD+ +K W+TLPPFAP D S+ KEIAG G GE TALKWVR C PHLP S
Sbjct: 49 NGDEQRRKEGGKWLTLPPFAPQKDPSSVAKEIAGGTPAGDGEITTALKWVRHCVPHLPMS 108
Query: 301 LVQKLFRLRQVRKELVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTET 480
LVQKLFRLRQVRK+LV S + + + ++ KRVSAK+ + SG++ILLPITV+ +
Sbjct: 109 LVQKLFRLRQVRKDLV-SINASSRVQFEGHQLKRVSAKEVMTSGEVILLPITVKNFTKKD 167
Query: 481 KDCSTDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEP 660
K+ + EI FIRSL+LYKD AIIVINKP G+P QGG GIK+S+DVL A SLK+D E
Sbjct: 168 KEQRDNHKEIKFIRSLILYKDSAIIVINKPHGLPTQGGFGIKNSIDVLAATSLKFDCPES 227
Query: 661 PRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIG 840
P+LVHRLDR+ SG+LV+GRTQ S+SILH+IFREKTS V +++ R LQ+KYWALVIG
Sbjct: 228 PKLVHRLDRDCSGLLVLGRTQISSSILHSIFREKTSRVLKHSVKNASRVLQRKYWALVIG 287
Query: 841 TPRLSKGRIPAPLAKIVLEDGKSDRITIARDESTPSQHALTEYKVIRSAHGYTWLELRPL 1020
TP+ S G + AP+ KIVLEDGKS+RIT+ ++ SQHALTEYKVI++++GYTWLEL PL
Sbjct: 288 TPKHSSGLLSAPIGKIVLEDGKSERITVIKERPASSQHALTEYKVIKTSNGYTWLELCPL 347
Query: 1021 TGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQ-PKVEHHELPFGLESGGGSI 1197
TGRKHQLRVHCAE L TPIVGDYKYGW AH+ EP+ + K+ +LPFGL+ GSI
Sbjct: 348 TGRKHQLRVHCAEVLRTPIVGDYKYGWHAHKKWEPIVIAKTAKLPKEKLPFGLDFESGSI 407
Query: 1198 SDKQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESWEILN 1377
S+KQPRLHLHCR+MILPNIA A+Q VAP+P YM SW+IL+
Sbjct: 408 SEKQPRLHLHCRQMILPNIAEAVQHLEPLSTTNCDLAGLDVLDLVAPLPPYMLLSWDILS 467
Query: 1378 Y 1380
+
Sbjct: 468 F 468
>ref|XP_020592021.1| RNA pseudouridine synthase 4, mitochondrial isoform X2 [Phalaenopsis
equestris]
Length = 461
Score = 472 bits (1215), Expect = e-160
Identities = 245/446 (54%), Positives = 310/446 (69%), Gaps = 4/446 (0%)
Frame = +1
Query: 55 SSTLLHRSPYSNXXXXXXXXXXREHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIAGRKTM 234
S ++LHRS +S+ E + KW+TLPPF S+GKE+AG K
Sbjct: 26 SGSILHRSSFSSTVLSSLVGGNGEEKRREKG--KWLTLPPFVSQKGPSSVGKELAGGKLA 83
Query: 235 GKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEAETKQNKPKRVSAK 414
G+ E TALKWV +C PHLP SLVQKLFRLRQVRKELV S A+ + + KRVSAK
Sbjct: 84 GQEEITTALKWVHQCFPHLPMSLVQKLFRLRQVRKELVSSG-----AQYEGQQLKRVSAK 138
Query: 415 DTLVSGDIILLPITVQKLVTETKDCSTDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGG 594
+TL SG++ILLPI+V+ E + ++ EI F+RSL+LYKD AIIVINKP G+PVQGG
Sbjct: 139 ETLSSGEVILLPISVENFTKENNENPYNQKEIKFMRSLILYKDSAIIVINKPHGLPVQGG 198
Query: 595 VGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGV 774
+GI++S+DVL A SLK+D E P+LVHRLDR+ SG+L++GRTQ S SILH+IFREKTS
Sbjct: 199 LGIRNSIDVLAATSLKFDSQESPKLVHRLDRDCSGLLILGRTQISTSILHSIFREKTSRT 258
Query: 775 GVDDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRITIARDESTPSQH 954
++I+ + R LQ+KYWALV+GTP+ S G + AP+ K++LEDGKS+RIT+ ++ SQH
Sbjct: 259 LKENIKDVPRLLQRKYWALVVGTPKHSSGLLSAPVGKVILEDGKSERITVIKERPASSQH 318
Query: 955 ALTEYKVIRSAHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRN----LE 1122
ALTEYKVI++++GYTWLEL PLTGRKHQLRVHCAE L TPIVGDYKYGW AH+ +E
Sbjct: 319 ALTEYKVIKTSNGYTWLELCPLTGRKHQLRVHCAEVLKTPIVGDYKYGWHAHKKWELIVE 378
Query: 1123 PMPCVQPKVEHHELPFGLESGGGSISDKQPRLHLHCREMILPNIATALQQXXXXXXXXXX 1302
PK +H PFGL+ GSIS+KQPRLHLHC ++ILPNIA A +
Sbjct: 379 ARTSKLPKEKH---PFGLDFESGSISEKQPRLHLHCHQLILPNIAEAGRHLEPSSATKLN 435
Query: 1303 XXXXXXXXFVAPVPSYMKESWEILNY 1380
VAP+P YM SW IL++
Sbjct: 436 LAELDMLDLVAPLPPYMVLSWNILSF 461
>ref|XP_018827853.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Juglans regia]
Length = 476
Score = 471 bits (1212), Expect = e-160
Identities = 247/438 (56%), Positives = 309/438 (70%), Gaps = 20/438 (4%)
Frame = +1
Query: 121 REHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIAGRKTMGKG----------EPVTALKWV 270
+E N D KW TLPPF P ++ + GKEI+ + K TALKWV
Sbjct: 46 KEGNNSD----KWFTLPPFTPTVNGAAFGKEISRNRAPLKSGVTTSATSTSTTTTALKWV 101
Query: 271 RRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEAETKQNKP-KRVSAKDTLVSGDIILL 447
RCCP LP SLVQKLFRLRQVR+E D C +A+ +Q + KRVSAKD++ GD I L
Sbjct: 102 LRCCPDLPRSLVQKLFRLRQVRRESNDVGSTCVDAQVQQERRLKRVSAKDSMNVGDRIFL 161
Query: 448 PITVQKLVTETKDCSTDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLG 627
PITVQ+ E +DC +E E F+RSLVLYKDPAI+V+NKPPGMPVQGG+GIK S+D L
Sbjct: 162 PITVQEFPFEKQDCHCNEEEANFVRSLVLYKDPAIVVVNKPPGMPVQGGIGIKQSLDGLA 221
Query: 628 AMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRA 807
A L Y+YSE PRLVHRLDR+SSGILVMGRTQTSA++LH+IFREKT G DD+++ R
Sbjct: 222 ATCLTYNYSETPRLVHRLDRDSSGILVMGRTQTSAAVLHSIFREKTFG-AKDDVDNEVRI 280
Query: 808 LQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRITIARD-ESTPSQHALTEYKVIRS 984
L+++YWALVIG+PR KG I PL K+V+++GKSDRITI + ++ +QHALT+Y+VI+S
Sbjct: 281 LERRYWALVIGSPRRQKGLISVPLGKVVVDNGKSDRITIVDNAQNMSAQHALTKYQVIKS 340
Query: 985 A-HGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHHE 1161
+ +GYTWLEL PLTGRKHQLRVHCAE LGTPIVGD KYGW+AH+ L+ +P + E HE
Sbjct: 341 SCYGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDLKYGWQAHKKLKHLPWPSLERESHE 400
Query: 1162 -------LPFGLESGGGSISDKQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXX 1320
+PFGL+ GSIS+K PRLHLHC++M+LPN++ ALQ
Sbjct: 401 NVTKGKTIPFGLDLQSGSISEKHPRLHLHCKQMVLPNVSMALQN--VQFSSDYHLSQVES 458
Query: 1321 XXFVAPVPSYMKESWEIL 1374
VAP+PSYM+ SW+IL
Sbjct: 459 LELVAPLPSYMQRSWDIL 476
>ref|XP_015892750.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Ziziphus
jujuba]
Length = 486
Score = 468 bits (1204), Expect = e-158
Identities = 250/482 (51%), Positives = 311/482 (64%), Gaps = 25/482 (5%)
Frame = +1
Query: 7 LCRRTALSSTTFQILRSSTLLHRSPY----SNXXXXXXXXXXREHTNGDDTFQKWVTLPP 174
L RR L S + L SP+ S+ +E GD+ KW TLPP
Sbjct: 6 LLRRILLRSPLNDTVLDGARLFFSPFHEWRSHYSSIAPETLTQEENPGDNNSNKWFTLPP 65
Query: 175 FAPHMDAPSIGKEIAGRKTMGKGEPV--------------TALKWVRRCCPHLPASLVQK 312
+ +D +GKEIA + K + TALKWV RCCP LP SLVQK
Sbjct: 66 YTSTVDGGILGKEIARNRLENKNDAAIGRGAANPPYSSSTTALKWVVRCCPELPRSLVQK 125
Query: 313 LFRLRQVRKELVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCS 492
LFRLRQVR+E D E ++ + +RV + GD I LPI+VQ+ + K+
Sbjct: 126 LFRLRQVRRESCDIGHSEMGDELQKPRLRRVITVFSYNLGDRIYLPISVQEFPVDKKEYH 185
Query: 493 TDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLV 672
+E E+ FIRSL LYKDPAIIV+NKPPGMPVQGG+GIK S+D L A L YD EPPRLV
Sbjct: 186 CNEEEVSFIRSLELYKDPAIIVVNKPPGMPVQGGIGIKRSLDELAATCLSYDCLEPPRLV 245
Query: 673 HRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGTPRL 852
HRLDR+SSGILVMGRTQTSA++LHTIFREKT G D+I++++R LQ++YWALVIG+PR
Sbjct: 246 HRLDRDSSGILVMGRTQTSATVLHTIFREKTFGASHDEIDNVKRILQRRYWALVIGSPRH 305
Query: 853 SKGRIPAPLAKIVLEDGKSDRITIARDEST-PSQHALTEYKVIRSAHGYTWLELRPLTGR 1029
KG I APL K+VL++GKSDRIT+ + T SQHA+T+YKVI S+HGYTWLEL P+TGR
Sbjct: 306 RKGFISAPLRKVVLDNGKSDRITVMHNSQTLASQHAITKYKVIGSSHGYTWLELSPITGR 365
Query: 1030 KHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHHE------LPFGLESGGG 1191
KHQLRVHCAE LGTPI+GDYKYGW+AH+N +P PC + +E LPFGL+ G
Sbjct: 366 KHQLRVHCAEVLGTPILGDYKYGWQAHKNWKPFPCSNHENNSNEVPKRKILPFGLDLDNG 425
Query: 1192 SISDKQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESWEI 1371
ISDK PRLHLHC++M+LP+I+ LQ VA +PS+M+ SWE+
Sbjct: 426 DISDKHPRLHLHCKQMVLPDISLVLQN--VQLYSDYDLSHLESIKLVASLPSHMQRSWEL 483
Query: 1372 LN 1377
N
Sbjct: 484 TN 485
>gb|PKA54095.1| RNA pseudouridine synthase 4, mitochondrial [Apostasia shenzhenica]
Length = 467
Score = 466 bits (1200), Expect = e-158
Identities = 246/447 (55%), Positives = 311/447 (69%), Gaps = 5/447 (1%)
Frame = +1
Query: 55 SSTLLHRSPYSNXXXXXXXXXXREHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIAGRKTM 234
S T+L SP+ + E + KW+TLP FAP DA S+ K +AG +
Sbjct: 27 SRTILQSSPFCSVASSSPSGEDGEEVRRMEG-SKWLTLPVFAPRKDASSVAKGLAGGNPL 85
Query: 235 GKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEAETKQNKPKRVSAK 414
KGEP TALKWVRRCCPHLP SLVQKLFRLRQVRK + S +E + +Q + KRVSAK
Sbjct: 86 AKGEPTTALKWVRRCCPHLPISLVQKLFRLRQVRKAV--SITTTSEEQPEQQQLKRVSAK 143
Query: 415 DTLVSGDIILLPITVQKLVTETKDCSTDET-EIGFIRSLVLYKDPAIIVINKPPGMPVQG 591
+ + SG++ILLP TVQ TE +I SL+LYKD AIIVINKP G+PVQG
Sbjct: 144 EAMSSGEVILLPNTVQNFTTENNYIPKHHHYDIKLFLSLILYKDSAIIVINKPYGLPVQG 203
Query: 592 GVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSG 771
GVG+KH +DVL A +K+D+ E PRLVHRLDR+SSG+L++GRTQ S+SILH++FREKT G
Sbjct: 204 GVGVKHCVDVLAATLMKFDFPEAPRLVHRLDRDSSGLLILGRTQVSSSILHSVFREKTCG 263
Query: 772 VGVDDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRITIARDES-TPS 948
+++ R LQ+KYWALVIG+P+ S G I AP+ K++LEDG+S+RIT+ +DE T S
Sbjct: 264 ALKMCVKNAPRILQRKYWALVIGSPKQSSGLISAPVGKVILEDGRSERITVIKDEKPTSS 323
Query: 949 QHALTEYKVIR-SAHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEP 1125
QH+LTE+KV++ S HGYTWLEL PLTGRKHQLRVHCAE L TPIVGDYKYG+ AHR +P
Sbjct: 324 QHSLTEFKVMKISEHGYTWLELCPLTGRKHQLRVHCAEVLRTPIVGDYKYGYNAHRKWKP 383
Query: 1126 MPCVQ--PKVEHHELPFGLESGGGSISDKQPRLHLHCREMILPNIATALQQXXXXXXXXX 1299
+ K+ +LPFGL+ GGSISD+QPRLHLHCR+MILP+IA A+ Q
Sbjct: 384 IVAENEASKLPKQKLPFGLDFEGGSISDEQPRLHLHCRQMILPDIAAAVNQ---FESSSH 440
Query: 1300 XXXXXXXXXFVAPVPSYMKESWEILNY 1380
VAP+PS+M+ SW+ L++
Sbjct: 441 ELEELDMLDLVAPLPSHMQLSWDTLSF 467
>ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Vitis vinifera]
emb|CBI40257.3| unnamed protein product, partial [Vitis vinifera]
Length = 476
Score = 466 bits (1198), Expect = e-157
Identities = 241/425 (56%), Positives = 304/425 (71%), Gaps = 17/425 (4%)
Frame = +1
Query: 154 KWVTLPPFAPHMDAPSIGKEIAGRKT------MGKGEPVTALKWVRRCCPHLPASLVQKL 315
KW TLP F P +DA S+GK ++G +T G TALKWV RCCP LP SLVQKL
Sbjct: 55 KWFTLPAFTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKWVVRCCPQLPRSLVQKL 114
Query: 316 FRLRQVRKELVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCST 495
FRLRQVR+E + + ++++ KRV+AKD + GD ILLPITV++ +E +
Sbjct: 115 FRLRQVRRESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEEFPSEKHEYHC 174
Query: 496 DETEIGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVH 675
++ EI F+ +L LYKDPAIIV+NKPPG+PVQGG+GIK S+D L A L+YD SEPPRLVH
Sbjct: 175 NDEEINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVH 234
Query: 676 RLDRESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGTPRLS 855
RLDR+SSGIL+MGRTQTSA+ILH+IFREKT G +DI++ +R LQ++YWALVIG+PR
Sbjct: 235 RLDRDSSGILIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRP 294
Query: 856 KGRIPAPLAKIVLEDGKSDRITIARDEST-PSQHALTEYKVIRSA-HGYTWLELRPLTGR 1029
+G I APL K+V++DGKS+RITI + T SQHA+TEY+VI+S+ HGYTWLEL PLTGR
Sbjct: 295 RGLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGR 354
Query: 1030 KHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHH---------ELPFGLES 1182
KHQLRVHCAE LGTPIVGDYKYGW+AHR + + Q +E + PFGL+
Sbjct: 355 KHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQL--FQSNIEKNLDENLSNRKTHPFGLDL 412
Query: 1183 GGGSISDKQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKES 1362
GSI DKQP LHLHC++M+LPN++ ALQ FVAP+PS+M+ S
Sbjct: 413 ESGSILDKQPHLHLHCKQMVLPNVSLALQN--LQLSAECDLSELESLEFVAPLPSHMQRS 470
Query: 1363 WEILN 1377
W+ILN
Sbjct: 471 WDILN 475
>ref|XP_020592022.1| RNA pseudouridine synthase 4, mitochondrial isoform X3 [Phalaenopsis
equestris]
Length = 460
Score = 464 bits (1195), Expect = e-157
Identities = 241/443 (54%), Positives = 307/443 (69%), Gaps = 4/443 (0%)
Frame = +1
Query: 55 SSTLLHRSPYSNXXXXXXXXXXREHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIAGRKTM 234
S ++LHRS +S+ E + KW+TLPPF S+GKE+AG K
Sbjct: 26 SGSILHRSSFSSTVLSSLVGGNGEEKRREKG--KWLTLPPFVSQKGPSSVGKELAGGKLA 83
Query: 235 GKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEAETKQNKPKRVSAK 414
G+ E TALKWV +C PHLP SLVQKLFRLRQVRKELV S A+ + + KRVSAK
Sbjct: 84 GQEEITTALKWVHQCFPHLPMSLVQKLFRLRQVRKELVSSG-----AQYEGQQLKRVSAK 138
Query: 415 DTLVSGDIILLPITVQKLVTETKDCSTDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGG 594
+TL SG++ILLPI+V+ E + ++ EI F+RSL+LYKD AIIVINKP G+PVQGG
Sbjct: 139 ETLSSGEVILLPISVENFTKENNENPYNQKEIKFMRSLILYKDSAIIVINKPHGLPVQGG 198
Query: 595 VGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGV 774
+GI++S+DVL A SLK+D E P+LVHRLDR+ SG+L++GRTQ S SILH+IFREKTS
Sbjct: 199 LGIRNSIDVLAATSLKFDSQESPKLVHRLDRDCSGLLILGRTQISTSILHSIFREKTSRT 258
Query: 775 GVDDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRITIARDESTPSQH 954
++I+ + R LQ+KYWALV+GTP+ S G + AP+ K++LEDGKS+RIT+ ++ SQH
Sbjct: 259 LKENIKDVPRLLQRKYWALVVGTPKHSSGLLSAPVGKVILEDGKSERITVIKERPASSQH 318
Query: 955 ALTEYKVIRSAHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRN----LE 1122
ALTEYKVI++++GYTWLEL PLTGRKHQLRVHCAE L TPIVGDYKYGW AH+ +E
Sbjct: 319 ALTEYKVIKTSNGYTWLELCPLTGRKHQLRVHCAEVLKTPIVGDYKYGWHAHKKWELIVE 378
Query: 1123 PMPCVQPKVEHHELPFGLESGGGSISDKQPRLHLHCREMILPNIATALQQXXXXXXXXXX 1302
PK +H PFGL+ GSIS+KQPRLHLHC ++ILPNIA A +
Sbjct: 379 ARTSKLPKEKH---PFGLDFESGSISEKQPRLHLHCHQLILPNIAEAGRHLEPSSATKLN 435
Query: 1303 XXXXXXXXFVAPVPSYMKESWEI 1371
VAP+P YM + + +
Sbjct: 436 LAELDMLDLVAPLPPYMLDHYVV 458
>ref|XP_023924555.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Quercus
suber]
ref|XP_023924556.1| RNA pseudouridine synthase 4, mitochondrial isoform X2 [Quercus
suber]
gb|POE95604.1| rna pseudouridine synthase 4, mitochondrial [Quercus suber]
Length = 499
Score = 465 bits (1197), Expect = e-157
Identities = 240/416 (57%), Positives = 305/416 (73%), Gaps = 8/416 (1%)
Frame = +1
Query: 154 KWVTLPPFAPHMDAPSIGKEIAGRKTMGKGE-PVTALKWVRRCCPHLPASLVQKLFRLRQ 330
KW TLPPF P ++A ++GKE++ R + K + TALKWV +CCP LP SLVQKLFRLRQ
Sbjct: 86 KWFTLPPFTPTLNAAALGKELSARSSQSKADVSTTALKWVLKCCPDLPRSLVQKLFRLRQ 145
Query: 331 VRKELVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITV-QKLVTETKDCSTDETE 507
VR+E A+ + KRV+AKD++ GD I LPITV Q++ +E + +E E
Sbjct: 146 VRRESNTMESTDVGAQVHERSLKRVAAKDSMNDGDRIFLPITVKQEVPSEKQKLYCNEEE 205
Query: 508 IGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDR 687
+ FIRSLVLY+DPAI+V+NKPPGM VQGG+GIK S+D L A L YD SEPPRLVHRLDR
Sbjct: 206 VNFIRSLVLYQDPAIVVVNKPPGMAVQGGIGIKTSLDELAATCLSYDLSEPPRLVHRLDR 265
Query: 688 ESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGTPRLSKGRI 867
+SSGILV+GRTQ SA++LH+IFREKT G DDI++ +R LQ+KYWALVIG+PR KG I
Sbjct: 266 DSSGILVLGRTQISATVLHSIFREKTCG-AKDDIDNEERILQRKYWALVIGSPRRPKGLI 324
Query: 868 PAPLAKIVLEDGKSDRITIARD-ESTPSQHALTEYKVIRSA-HGYTWLELRPLTGRKHQL 1041
APL K+V+++GKSDRITI + ++ +Q A+TEY+VI+S+ HG+TWLEL PLTGRKHQL
Sbjct: 325 SAPLGKVVVDNGKSDRITIIDNLQNMSAQLAITEYQVIKSSCHGFTWLELSPLTGRKHQL 384
Query: 1042 RVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEH----HELPFGLESGGGSISDKQ 1209
RVHCAEALGTPIVGD KYGW+AHRNL+ +PC E+ +PFGL+ GSIS+K
Sbjct: 385 RVHCAEALGTPIVGDLKYGWQAHRNLKQLPCSMKSNENPTKGKTVPFGLDLESGSISEKH 444
Query: 1210 PRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESWEILN 1377
P LHLHC++M+LPN++ ALQ VAP+PS+M+ SW+ILN
Sbjct: 445 PHLHLHCKQMVLPNVSEALQN--VQFSSDYDLSEVESLELVAPLPSHMQRSWDILN 498
>ref|XP_020592020.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Phalaenopsis
equestris]
Length = 464
Score = 464 bits (1193), Expect = e-157
Identities = 241/437 (55%), Positives = 304/437 (69%), Gaps = 4/437 (0%)
Frame = +1
Query: 55 SSTLLHRSPYSNXXXXXXXXXXREHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIAGRKTM 234
S ++LHRS +S+ E + KW+TLPPF S+GKE+AG K
Sbjct: 26 SGSILHRSSFSSTVLSSLVGGNGEEKRREKG--KWLTLPPFVSQKGPSSVGKELAGGKLA 83
Query: 235 GKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEAETKQNKPKRVSAK 414
G+ E TALKWV +C PHLP SLVQKLFRLRQVRKELV S A+ + + KRVSAK
Sbjct: 84 GQEEITTALKWVHQCFPHLPMSLVQKLFRLRQVRKELVSSG-----AQYEGQQLKRVSAK 138
Query: 415 DTLVSGDIILLPITVQKLVTETKDCSTDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGG 594
+TL SG++ILLPI+V+ E + ++ EI F+RSL+LYKD AIIVINKP G+PVQGG
Sbjct: 139 ETLSSGEVILLPISVENFTKENNENPYNQKEIKFMRSLILYKDSAIIVINKPHGLPVQGG 198
Query: 595 VGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGV 774
+GI++S+DVL A SLK+D E P+LVHRLDR+ SG+L++GRTQ S SILH+IFREKTS
Sbjct: 199 LGIRNSIDVLAATSLKFDSQESPKLVHRLDRDCSGLLILGRTQISTSILHSIFREKTSRT 258
Query: 775 GVDDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRITIARDESTPSQH 954
++I+ + R LQ+KYWALV+GTP+ S G + AP+ K++LEDGKS+RIT+ ++ SQH
Sbjct: 259 LKENIKDVPRLLQRKYWALVVGTPKHSSGLLSAPVGKVILEDGKSERITVIKERPASSQH 318
Query: 955 ALTEYKVIRSAHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRN----LE 1122
ALTEYKVI++++GYTWLEL PLTGRKHQLRVHCAE L TPIVGDYKYGW AH+ +E
Sbjct: 319 ALTEYKVIKTSNGYTWLELCPLTGRKHQLRVHCAEVLKTPIVGDYKYGWHAHKKWELIVE 378
Query: 1123 PMPCVQPKVEHHELPFGLESGGGSISDKQPRLHLHCREMILPNIATALQQXXXXXXXXXX 1302
PK +H PFGL+ GSIS+KQPRLHLHC ++ILPNIA A +
Sbjct: 379 ARTSKLPKEKH---PFGLDFESGSISEKQPRLHLHCHQLILPNIAEAGRHLEPSSATKLN 435
Query: 1303 XXXXXXXXFVAPVPSYM 1353
VAP+P YM
Sbjct: 436 LAELDMLDLVAPLPPYM 452
>ref|XP_019225818.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Nicotiana
attenuata]
gb|OIT32415.1| rna uridine synthase 4, mitochondrial [Nicotiana attenuata]
Length = 464
Score = 463 bits (1191), Expect = e-157
Identities = 240/418 (57%), Positives = 300/418 (71%), Gaps = 10/418 (2%)
Frame = +1
Query: 154 KWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQV 333
KW TLPPF P ++ ++GKE+AG K +TALKWV+RCCP LP SLVQKLFRLRQV
Sbjct: 57 KWFTLPPFTPTVNGAALGKELAGVKMDKSTNTMTALKWVQRCCPELPQSLVQKLFRLRQV 116
Query: 334 RKELVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTE-TKDCSTDETEI 510
R+E ++ ++ +PKRV+AK+++ GD I LPITVQK ++ D + E E+
Sbjct: 117 RRE---------SSDVEEQRPKRVAAKESMNIGDRIFLPITVQKFPSDKVTDYPSSEEEM 167
Query: 511 GFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRE 690
F+ SL LYKDP IIV+NKPPG+PVQGG+GIK S+D L A +KY+YSE PRLVHRLDR+
Sbjct: 168 KFLHSLELYKDPEIIVLNKPPGLPVQGGIGIKRSLDELAAKYMKYEYSEAPRLVHRLDRD 227
Query: 691 SSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGTPRLSKGRIP 870
SGILVMGRTQ SAS+LH++FREKT G +D+ES +R LQK+YWALVIG PR SKG I
Sbjct: 228 CSGILVMGRTQLSASVLHSVFREKTFGTQTEDLESKKRVLQKRYWALVIGCPRRSKGLIS 287
Query: 871 APLAKIVLEDGKSDRITIARDESTPS-QHALTEYKVIRSAH-GYTWLELRPLTGRKHQLR 1044
PL K+VL++GKS+RITI D PS Q A+TEY++I S+ GYTWLEL PLTGRKHQLR
Sbjct: 288 VPLGKVVLDNGKSERITIMSDVREPSAQFAVTEYRIIGSSEKGYTWLELSPLTGRKHQLR 347
Query: 1045 VHCAEALGTPIVGDYKYGWKAHRNLEPMPC------VQPKVEHHEL-PFGLESGGGSISD 1203
VHCAE LGTPIVGDYKYGW+AHR L+ + + ++ E+ PF L G GSISD
Sbjct: 348 VHCAEVLGTPIVGDYKYGWQAHRKLKHLSSSTSIVNLGARIPEQEVDPFSLRLGNGSISD 407
Query: 1204 KQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESWEILN 1377
KQP LHLHC+EM+LPNI+ ALQQ VAP+PS+M++SW+ L+
Sbjct: 408 KQPHLHLHCKEMVLPNISLALQQ--ARVVSDADLVDVESIKLVAPLPSHMQKSWDCLS 463
>ref|XP_022749157.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Durio
zibethinus]
Length = 477
Score = 462 bits (1188), Expect = e-156
Identities = 242/426 (56%), Positives = 305/426 (71%), Gaps = 11/426 (2%)
Frame = +1
Query: 133 NGDDTFQKWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQK 312
N + KW TLPPFA ++A + ++AG+ + + + TA+KWV +CCP LP SLVQK
Sbjct: 55 NSEKKDSKWFTLPPFAKTVNASVLRAKLAGKSHLKEADESTAIKWVLKCCPELPRSLVQK 114
Query: 313 LFRLRQVRKE--LVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKD 486
LFRLRQVR+E +V+ + D +++ ++ + KRV AKD+L GD I LPITV++ E ++
Sbjct: 115 LFRLRQVRRESKIVEVSDD--DSQVQRIQLKRVGAKDSLNIGDRIFLPITVREFPEEKQE 172
Query: 487 CSTDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPR 666
+ E+ FIR+L LYKDPAIIV+NKPPGMPVQGG+GIK S+D L A L YDYSEPPR
Sbjct: 173 HGCTDEELNFIRNLELYKDPAIIVLNKPPGMPVQGGIGIKWSLDELAATWLCYDYSEPPR 232
Query: 667 LVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGTP 846
LVHRLDR+ SGILVMGRTQTSA ILH++FRE+T GV D ++ +R LQKKYWALVIG+P
Sbjct: 233 LVHRLDRDCSGILVMGRTQTSARILHSVFREETIGVSEHDFDNEKRILQKKYWALVIGSP 292
Query: 847 RLSKGRIPAPLAKIVLEDGKSDRITI-ARDESTPSQHALTEYKVIR-SAHGYTWLELRPL 1020
R KG I APL K+V++DGKSDRIT+ + SQHA+TEY VI+ S+HGYTWLEL PL
Sbjct: 293 RRPKGTISAPLRKVVVDDGKSDRITVFDNTKIMSSQHAITEYSVIKTSSHGYTWLELSPL 352
Query: 1021 TGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMP-------CVQPKVEHHELPFGLE 1179
TGRKHQLRVHCAE LGTPIVGDYKYGW+AHR + +P + + + LPFGL
Sbjct: 353 TGRKHQLRVHCAEILGTPIVGDYKYGWQAHRRWQNLPESDLGKNSNEKFSKENSLPFGLN 412
Query: 1180 SGGGSISDKQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKE 1359
GSI +K+ RLHLHCREMILPN++ ALQ VAP+PSYM++
Sbjct: 413 MNSGSILEKRLRLHLHCREMILPNVSQALQ--YLQSSTDHDLSKLKSLEIVAPLPSYMQK 470
Query: 1360 SWEILN 1377
SW+ILN
Sbjct: 471 SWDILN 476
>ref|XP_020102939.1| RNA pseudouridine synthase 4, mitochondrial-like isoform X6 [Ananas
comosus]
Length = 477
Score = 462 bits (1188), Expect = e-156
Identities = 238/424 (56%), Positives = 306/424 (72%), Gaps = 16/424 (3%)
Frame = +1
Query: 154 KWVTLPPFA-PHMDAPSIGKEIAGRKTMGKGEPV---------TALKWVRRCCPHLPASL 303
+W+ LPPFA P +D S+ K++ G G P TALKWVRRCCP LPA+L
Sbjct: 56 RWLALPPFAAPPVDPSSLAKKMM---FCGGGYPAGCSGDDYTTTALKWVRRCCPDLPATL 112
Query: 304 VQKLFRLRQVRKELVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETK 483
V KLFRLRQVRK + S ++ ++ + KRVSAK+ ++ GD+ILLP TVQK +
Sbjct: 113 VHKLFRLRQVRKNVASSTISYMDSHAEKMQSKRVSAKNAMMPGDVILLPATVQKSIVGKF 172
Query: 484 DCSTDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPP 663
D ++ E ++ ++RS+ LY+D IIV+NKPP MPVQGG+GIK+S+D L ++SLKY+Y+E P
Sbjct: 173 DDASGEDDMKYMRSIELYRDTTIIVLNKPPSMPVQGGIGIKYSIDALASISLKYEYAESP 232
Query: 664 RLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGT 843
RLVHRLDR+SSG+LV+ R Q ASILH++FREKT+G +DI+S R LQ+KY ALVIG
Sbjct: 233 RLVHRLDRDSSGVLVLARNQFCASILHSLFREKTTGASFNDIKSASRVLQRKYLALVIGI 292
Query: 844 PRLSKGRIPAPLAKIVLEDGKSDRITIARD-ESTPSQHALTEYKVIRS-AHGYTWLELRP 1017
PR SKG I APLAK++ EDGK++RITIA D +S +QHALTEYKVI S HGYTWLEL P
Sbjct: 293 PRHSKGLISAPLAKVIQEDGKAERITIADDMKSASAQHALTEYKVIESFPHGYTWLELCP 352
Query: 1018 LTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQ----PKVEHHELPFGLESG 1185
LTGRKHQLRVHCAE L TPIVGDYKYGWK+HR +P+P K ++LPFGL+SG
Sbjct: 353 LTGRKHQLRVHCAEVLRTPIVGDYKYGWKSHRRWKPVPFPPTIDVEKFPRNKLPFGLKSG 412
Query: 1186 GGSISDKQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESW 1365
GGSI++KQP LHLHC++M LPNI+ AL+ FVAP+P++M++SW
Sbjct: 413 GGSIAEKQPWLHLHCKQMTLPNISAALEHPQSLNDDDRHLSKLEKLSFVAPLPTHMQQSW 472
Query: 1366 EILN 1377
+IL+
Sbjct: 473 DILS 476
>gb|OAY82176.1| RNA pseudouridine synthase 4, mitochondrial [Ananas comosus]
Length = 477
Score = 462 bits (1188), Expect = e-156
Identities = 238/424 (56%), Positives = 306/424 (72%), Gaps = 16/424 (3%)
Frame = +1
Query: 154 KWVTLPPFA-PHMDAPSIGKEIAGRKTMGKGEPV---------TALKWVRRCCPHLPASL 303
+W+ LPPFA P +D S+ K++ G G P TALKWVRRCCP LPA+L
Sbjct: 56 RWLALPPFAAPPVDPSSLAKKMM---FCGGGYPAGCSGDDYTTTALKWVRRCCPDLPATL 112
Query: 304 VQKLFRLRQVRKELVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETK 483
V KLFRLRQVRK + S ++ ++ + KRVSAK+ ++ GD+ILLP TVQK +
Sbjct: 113 VHKLFRLRQVRKNVASSTISYMDSHAEKMQSKRVSAKNAMMPGDVILLPATVQKSIVGKF 172
Query: 484 DCSTDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPP 663
D ++ E ++ ++RS+ LY+D IIV+NKPP MPVQGG+GIK+S+D L ++SLKY+Y+E P
Sbjct: 173 DDASGEDDMKYMRSIELYRDTTIIVLNKPPSMPVQGGIGIKYSIDALASISLKYEYAESP 232
Query: 664 RLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGT 843
RLVHRLDR+SSG+LV+ R Q ASILH++FREKT+G +DI+S R LQ+KY ALVIG
Sbjct: 233 RLVHRLDRDSSGVLVLARNQFCASILHSLFREKTTGASFNDIKSASRVLQRKYLALVIGI 292
Query: 844 PRLSKGRIPAPLAKIVLEDGKSDRITIARD-ESTPSQHALTEYKVIRS-AHGYTWLELRP 1017
PR SKG I APLAK++ EDGK++RITIA D +S +QHALTEYKVI S HGYTWLEL P
Sbjct: 293 PRHSKGLISAPLAKVIQEDGKAERITIADDMKSASAQHALTEYKVIESFPHGYTWLELCP 352
Query: 1018 LTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQ----PKVEHHELPFGLESG 1185
LTGRKHQLRVHCAE L TPIVGDYKYGWK+HR +P+P K ++LPFGL+SG
Sbjct: 353 LTGRKHQLRVHCAEVLRTPIVGDYKYGWKSHRRWKPVPFPPTIDVEKFPRNKLPFGLKSG 412
Query: 1186 GGSISDKQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESW 1365
GGSI++KQP LHLHC++M LPNI+ AL+ FVAP+P++M++SW
Sbjct: 413 GGSIAEKQPWLHLHCKQMTLPNISAALEHLQSLNDDDRHLSKLEKLSFVAPLPTHMQQSW 472
Query: 1366 EILN 1377
+IL+
Sbjct: 473 DILS 476
>gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
Length = 477
Score = 460 bits (1183), Expect = e-155
Identities = 240/419 (57%), Positives = 297/419 (70%), Gaps = 11/419 (2%)
Frame = +1
Query: 154 KWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQV 333
KW TLPPF ++A +G +++G+ TA+KWV RCCP LP SLVQKLFRLRQV
Sbjct: 62 KWFTLPPFTKTVNASVLGAKLSGKPHSKAANETTAVKWVMRCCPELPRSLVQKLFRLRQV 121
Query: 334 RKE--LVDSAGDCAEAETKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCSTDETE 507
R+E +++ AGD + +T Q K RV AKD L GD I LP +V++ E ++ E E
Sbjct: 122 RRESHVLEVAGDGCQVQTVQLK--RVGAKDALNIGDRIFLPFSVREFREEKQESGCTEEE 179
Query: 508 IGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDR 687
+ FIR L LYKDPAIIV+NKPPGMPVQGG+GIK S+D L A L +DYSEPPRLVHRLDR
Sbjct: 180 LNFIRGLELYKDPAIIVLNKPPGMPVQGGIGIKWSLDKLAAACLCFDYSEPPRLVHRLDR 239
Query: 688 ESSGILVMGRTQTSASILHTIFREKTSGVGVDDIESIQRALQKKYWALVIGTPRLSKGRI 867
+SSGILVMGRTQ SA+ILH++FRE+T+ DD+++ +R LQK+YWALVIG+PR KG I
Sbjct: 240 DSSGILVMGRTQMSATILHSVFREETNDASKDDVDNEKRILQKRYWALVIGSPRRPKGMI 299
Query: 868 PAPLAKIVLEDGKSDRITI-ARDESTPSQHALTEYKVIR-SAHGYTWLELRPLTGRKHQL 1041
APL K+V++DGKSDRIT+ + SQ A TEY+VI+ ++HGYTWLEL PLTGRKHQL
Sbjct: 300 VAPLRKVVVDDGKSDRITVFDNSQIVSSQRAKTEYQVIKTTSHGYTWLELSPLTGRKHQL 359
Query: 1042 RVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPK-------VEHHELPFGLESGGGSIS 1200
RVHCAE LGTPIVGDYKYGW+AHR + +P K E + LPFGL GSIS
Sbjct: 360 RVHCAEVLGTPIVGDYKYGWQAHRRWQHLPESDLKKSSNDKCPEENMLPFGLNMDSGSIS 419
Query: 1201 DKQPRLHLHCREMILPNIATALQQXXXXXXXXXXXXXXXXXXFVAPVPSYMKESWEILN 1377
K+PRLHLHCREMI PN++ ALQ VAP+PSYM++SW+I+N
Sbjct: 420 AKRPRLHLHCREMIFPNVSQALQN--LQLSTDHDLSKLKSLEVVAPLPSYMQKSWDIMN 476
>ref|XP_020592024.1| RNA pseudouridine synthase 4, mitochondrial isoform X5 [Phalaenopsis
equestris]
Length = 452
Score = 459 bits (1180), Expect = e-155
Identities = 235/407 (57%), Positives = 296/407 (72%), Gaps = 4/407 (0%)
Frame = +1
Query: 55 SSTLLHRSPYSNXXXXXXXXXXREHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIAGRKTM 234
S ++LHRS +S+ E + KW+TLPPF S+GKE+AG K
Sbjct: 26 SGSILHRSSFSSTVLSSLVGGNGEEKRREKG--KWLTLPPFVSQKGPSSVGKELAGGKLA 83
Query: 235 GKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEAETKQNKPKRVSAK 414
G+ E TALKWV +C PHLP SLVQKLFRLRQVRKELV S A+ + + KRVSAK
Sbjct: 84 GQEEITTALKWVHQCFPHLPMSLVQKLFRLRQVRKELVSSG-----AQYEGQQLKRVSAK 138
Query: 415 DTLVSGDIILLPITVQKLVTETKDCSTDETEIGFIRSLVLYKDPAIIVINKPPGMPVQGG 594
+TL SG++ILLPI+V+ E + ++ EI F+RSL+LYKD AIIVINKP G+PVQGG
Sbjct: 139 ETLSSGEVILLPISVENFTKENNENPYNQKEIKFMRSLILYKDSAIIVINKPHGLPVQGG 198
Query: 595 VGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGV 774
+GI++S+DVL A SLK+D E P+LVHRLDR+ SG+L++GRTQ S SILH+IFREKTS
Sbjct: 199 LGIRNSIDVLAATSLKFDSQESPKLVHRLDRDCSGLLILGRTQISTSILHSIFREKTSRT 258
Query: 775 GVDDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRITIARDESTPSQH 954
++I+ + R LQ+KYWALV+GTP+ S G + AP+ K++LEDGKS+RIT+ ++ SQH
Sbjct: 259 LKENIKDVPRLLQRKYWALVVGTPKHSSGLLSAPVGKVILEDGKSERITVIKERPASSQH 318
Query: 955 ALTEYKVIRSAHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRN----LE 1122
ALTEYKVI++++GYTWLEL PLTGRKHQLRVHCAE L TPIVGDYKYGW AH+ +E
Sbjct: 319 ALTEYKVIKTSNGYTWLELCPLTGRKHQLRVHCAEVLKTPIVGDYKYGWHAHKKWELIVE 378
Query: 1123 PMPCVQPKVEHHELPFGLESGGGSISDKQPRLHLHCREMILPNIATA 1263
PK +H PFGL+ GSIS+KQPRLHLHC ++ILPNIA A
Sbjct: 379 ARTSKLPKEKH---PFGLDFESGSISEKQPRLHLHCHQLILPNIAEA 422