BLASTX nr result

ID: Ophiopogon26_contig00025592 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00025592
         (655 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243742.1| E3 ubiquitin-protein ligase RNF144A-like iso...    94   3e-19
ref|XP_020243740.1| E3 ubiquitin-protein ligase RNF144A-like iso...    94   4e-19

>ref|XP_020243742.1| E3 ubiquitin-protein ligase RNF144A-like isoform X2 [Asparagus
           officinalis]
          Length = 289

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 52/98 (53%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
 Frame = -3

Query: 290 LSAEKLHEGTQNSPILVTPFRNGLQGSKNEPICL--EDELEVIGDSMYPIIVDDYQNGGD 117
           + A K+ EGT+NSPI+V PFRNG QGSK EPICL  EDE+E++GDS  PI VDDY     
Sbjct: 19  MRAVKIEEGTRNSPIIVAPFRNGDQGSKIEPICLDVEDEVEIVGDSKNPISVDDY----- 73

Query: 116 PEEVLVEFAMESLMDLDCFEVGPFDPKGKRVKIERERR 3
                       L+DLDC EV   D KGK+ K E +RR
Sbjct: 74  -----------FLLDLDCIEVETIDRKGKKPKRESKRR 100


>ref|XP_020243740.1| E3 ubiquitin-protein ligase RNF144A-like isoform X1 [Asparagus
           officinalis]
 ref|XP_020243741.1| E3 ubiquitin-protein ligase RNF144A-like isoform X1 [Asparagus
           officinalis]
 gb|ONK61126.1| uncharacterized protein A4U43_C08F26510 [Asparagus officinalis]
          Length = 310

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 52/98 (53%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
 Frame = -3

Query: 290 LSAEKLHEGTQNSPILVTPFRNGLQGSKNEPICL--EDELEVIGDSMYPIIVDDYQNGGD 117
           + A K+ EGT+NSPI+V PFRNG QGSK EPICL  EDE+E++GDS  PI VDDY     
Sbjct: 19  MRAVKIEEGTRNSPIIVAPFRNGDQGSKIEPICLDVEDEVEIVGDSKNPISVDDY----- 73

Query: 116 PEEVLVEFAMESLMDLDCFEVGPFDPKGKRVKIERERR 3
                       L+DLDC EV   D KGK+ K E +RR
Sbjct: 74  -----------FLLDLDCIEVETIDRKGKKPKRESKRR 100


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