BLASTX nr result

ID: Ophiopogon26_contig00024455 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00024455
         (626 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010931892.1| PREDICTED: uncharacterized protein LOC105052...    57   3e-07
ref|XP_009405014.1| PREDICTED: uncharacterized protein LOC103988...    55   2e-06
gb|POE61208.1| hypothetical protein CFP56_34370 [Quercus suber]        55   2e-06
ref|XP_006376530.1| hypothetical protein POPTR_0013s14440g [Popu...    54   4e-06

>ref|XP_010931892.1| PREDICTED: uncharacterized protein LOC105052684 [Elaeis guineensis]
          Length = 86

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +1

Query: 226 KRAVTGGEDTRKQAEESLRTVMYLSCWGPN 315
           K AVT GED RK+AEESLRTVM+LSCWGPN
Sbjct: 57  KSAVTAGEDKRKRAEESLRTVMFLSCWGPN 86


>ref|XP_009405014.1| PREDICTED: uncharacterized protein LOC103988185 [Musa acuminata
           subsp. malaccensis]
          Length = 86

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 39/87 (44%), Positives = 44/87 (50%), Gaps = 23/87 (26%)
 Frame = +1

Query: 124 MSLRYLMSRIVVQLHA--------HGSKRAVQGAGPG------------IINDS---KRA 234
           MSLRY MSR+VVQ  A        H S+    GA                ++DS   K  
Sbjct: 1   MSLRY-MSRVVVQGRARAAQGIRDHASRSVKDGAAASSSSSNRVRLLSRAVDDSSVLKAC 59

Query: 235 VTGGEDTRKQAEESLRTVMYLSCWGPN 315
                D RK+AEESLRTVMYLSCWGPN
Sbjct: 60  CAAEVDKRKRAEESLRTVMYLSCWGPN 86


>gb|POE61208.1| hypothetical protein CFP56_34370 [Quercus suber]
          Length = 91

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
 Frame = +1

Query: 178 SKRAVQGAGPGIINDS--KRAVTGGEDTRKQAEESLRTVMYLSCWGPN 315
           S + ++G   G+I DS  K A T  +D  KQAEESLRTVMYLSCWGP+
Sbjct: 44  SSKQMRGLSGGLIADSSVKAAKTSEDDKIKQAEESLRTVMYLSCWGPS 91


>ref|XP_006376530.1| hypothetical protein POPTR_0013s14440g [Populus trichocarpa]
 gb|PNT08400.1| hypothetical protein POPTR_013G148300v3 [Populus trichocarpa]
          Length = 84

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
 Frame = +1

Query: 169 AHGSKRAVQGAGPGIINDSKRAVTGGEDTR-KQAEESLRTVMYLSCWGPN 315
           A  SK+ +  +G    ND  ++    ED + KQAEESLRTVMYLSCWGPN
Sbjct: 34  AASSKQTISFSGNFSFNDLNKSGKNSEDNKLKQAEESLRTVMYLSCWGPN 83


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