BLASTX nr result

ID: Ophiopogon26_contig00024383 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00024383
         (638 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273984.1| uncharacterized protein LOC109848748 [Aspara...    89   5e-17
ref|XP_020672719.1| uncharacterized protein LOC110092488 [Dendro...    58   3e-06

>ref|XP_020273984.1| uncharacterized protein LOC109848748 [Asparagus officinalis]
 ref|XP_020273985.1| uncharacterized protein LOC109848748 [Asparagus officinalis]
 gb|ONK63524.1| uncharacterized protein A4U43_C07F16110 [Asparagus officinalis]
          Length = 629

 Score = 89.4 bits (220), Expect = 5e-17
 Identities = 59/151 (39%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
 Frame = +3

Query: 24  DTGQKATSKVLQYCSEIAPLMEEEPDDFFVEIYTASNPEEKVMNEI--------VGDGVD 179
           DTGQKA          +AP   EE DDFFV +YT  + + +  ++I        V DG+D
Sbjct: 227 DTGQKA----------VAPSAAEEIDDFFVGVYTDRSEDGEDQDQIKETCEVASVDDGLD 276

Query: 180 QNCEVSNEEDEVMMSFLEYXXXXXXXXXXXXXXTSSLAPEDGMVESESMVSVFDFNWEEE 359
           +  E+ +EE +V MS LEY               S    +    ESE+  S  DFNWE  
Sbjct: 277 KRSELPDEEVDVAMSSLEYVERDRRLDDAEDEEKSGFVSK----ESENEESTLDFNWEGR 332

Query: 360 -GSPFPDNITECSECPDDCSGLMPPQAESSI 449
             +P  DN+T+ SECPDD   LMPPQ ESS+
Sbjct: 333 VDNPCSDNLTKSSECPDDRLDLMPPQIESSV 363


>ref|XP_020672719.1| uncharacterized protein LOC110092488 [Dendrobium catenatum]
 gb|PKU76415.1| hypothetical protein MA16_Dca001018 [Dendrobium catenatum]
          Length = 581

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 24/138 (17%)
 Frame = +3

Query: 69  EIAPLMEEEPDDFFVEIYTASNPEEKVMNEIVGDGV-----------------------D 179
           E+   + + P D FVEI T   P+E+ + E   D +                       D
Sbjct: 248 ELEDEISKNPSDLFVEIITM--PQEETVGEYNYDEISIIDEKYHEQCMPQFKEYSDMSFD 305

Query: 180 QNCEVSNEE-DEVMMSFLEYXXXXXXXXXXXXXXTSSLAPEDGMVESESMVSVFDFNWEE 356
           QN E S +E D+VMM+FLEY                    EDG +    + ++ D NWEE
Sbjct: 306 QNSEFSQDEMDDVMMNFLEYVELDHGRTTAKKDYE-----EDGEIRKPEIKTI-DMNWEE 359

Query: 357 EGSPFPDNITECSECPDD 410
           E   FPDN T+ SECPD+
Sbjct: 360 EICSFPDN-TQMSECPDE 376


Top