BLASTX nr result

ID: Ophiopogon26_contig00024105 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00024105
         (423 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK67985.1| uncharacterized protein A4U43_C05F5960 [Asparagus...    80   3e-26
gb|ONK77492.1| uncharacterized protein A4U43_C02F7120 [Asparagus...    79   6e-16
gb|ONK57668.1| uncharacterized protein A4U43_C09F2850 [Asparagus...    62   4e-14

>gb|ONK67985.1| uncharacterized protein A4U43_C05F5960 [Asparagus officinalis]
          Length = 231

 Score = 79.7 bits (195), Expect(2) = 3e-26
 Identities = 35/76 (46%), Positives = 50/76 (65%)
 Frame = +3

Query: 195 FDGARKHDGPKSGAGFVYRNADTALIAATTVPTIDNDINSIELAAAWNIPHWIYKNFGSC 374
           FDGA K D  K+G GF+ R A + ++AAT +P    ++N  EL   W+   W YK +G+C
Sbjct: 111 FDGACKLDSSKAGTGFLIRCAGSPILAATAIPIDHIEVNYAELIGDWSALTWCYKRYGTC 170

Query: 375 AIWLEGDSKFVVDLLN 422
            +W+EGDSK V+DLL+
Sbjct: 171 LVWIEGDSKHVLDLLS 186



 Score = 66.6 bits (161), Expect(2) = 3e-26
 Identities = 27/60 (45%), Positives = 42/60 (70%)
 Frame = +2

Query: 17  IFETVNYLVIEQLATTPLEAEVDDLGLLLDWGMQPTVAPIKQPVVIQWHPPKPGRLKINF 196
           IFE+ N LV+EQ A+ P+EA  ++L LL+ WG++PT+   + P ++ W PP+   +KINF
Sbjct: 52  IFESCNSLVLEQFASCPIEAPQEELSLLMAWGLRPTITNSQAPTMVAWEPPRDNWIKINF 111


>gb|ONK77492.1| uncharacterized protein A4U43_C02F7120 [Asparagus officinalis]
          Length = 126

 Score = 78.6 bits (192), Expect = 6e-16
 Identities = 34/76 (44%), Positives = 50/76 (65%)
 Frame = +3

Query: 195 FDGARKHDGPKSGAGFVYRNADTALIAATTVPTIDNDINSIELAAAWNIPHWIYKNFGSC 374
           FDGA K D  ++G GF+ R A + ++AA  +P    ++N  EL  AW+   W YK +G+C
Sbjct: 16  FDGACKLDSSQAGTGFLIRCAGSPILAAAAIPIDHIEVNYAELIGAWSALTWCYKRYGAC 75

Query: 375 AIWLEGDSKFVVDLLN 422
            +W+EGDSK V+DLL+
Sbjct: 76  LVWIEGDSKHVLDLLS 91


>gb|ONK57668.1| uncharacterized protein A4U43_C09F2850 [Asparagus officinalis]
          Length = 229

 Score = 61.6 bits (148), Expect(2) = 4e-14
 Identities = 26/65 (40%), Positives = 40/65 (61%)
 Frame = +3

Query: 228 SGAGFVYRNADTALIAATTVPTIDNDINSIELAAAWNIPHWIYKNFGSCAIWLEGDSKFV 407
           +G  F+   A + ++AAT +P     +N  EL  AW+   W YK +G+C +W+ GDSK V
Sbjct: 89  TGTCFLIHYAGSPILAATAIPIDHIKVNYAELIVAWSALTWCYKRYGACLVWIAGDSKHV 148

Query: 408 VDLLN 422
           +DLL+
Sbjct: 149 LDLLS 153



 Score = 43.9 bits (102), Expect(2) = 4e-14
 Identities = 17/45 (37%), Positives = 32/45 (71%)
 Frame = +2

Query: 17  IFETVNYLVIEQLATTPLEAEVDDLGLLLDWGMQPTVAPIKQPVV 151
           +F++ N LV+EQ A+ P+EA+ ++L LL+ WG++P +   + P +
Sbjct: 44  MFKSCNSLVLEQFASCPIEAQWEELSLLMVWGLRPIITNSRAPTM 88


Top