BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00024031
         (543 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   211   6e-60
emb|CDP17738.1| unnamed protein product [Coffea canephora]            201   4e-57
emb|CDP17739.1| unnamed protein product [Coffea canephora]            191   5e-56
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   198   6e-56
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]          191   4e-53
gb|PKA55182.1| Retrovirus-related Pol polyprotein from transposo...   172   4e-50
gb|PNX57796.1| putative retrotransposon Ty1-copia subclass prote...   168   1e-48
gb|AOZ57162.1| integrase, partial [Coccinia grandis]                  164   1e-47
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   171   9e-46
gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposo...   166   5e-45
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   168   5e-45
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     168   6e-45
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   167   2e-44
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar...   166   2e-44
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]            166   4e-44
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   166   4e-44
gb|ABA93686.1| retrotransposon protein, putative, Ty1-copia subc...   164   4e-44
gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposo...   166   5e-44
gb|KYP59920.1| Retrovirus-related Pol polyprotein from transposo...   155   5e-44
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]            165   5e-44

>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score =  211 bits (536), Expect = 6e-60
 Identities = 103/180 (57%), Positives = 129/180 (71%)
 Frame = -1

Query: 540 CKMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCS 361
           CK++ CEHC  GKK RVK GT IH   G+LD VH DVWGPS  ASL G+ ++V+FVDD S
Sbjct: 236 CKLDFCEHCVKGKKTRVKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTFVDDFS 295

Query: 360 RHVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGI 181
           R +W+  M  KDEVL +F KWKK +E+QTGRKIK  + DN G  +Y+ DPF++ C   GI
Sbjct: 296 RRIWVYAMKTKDEVLGIFLKWKKRMETQTGRKIKHFRTDNGG--EYTSDPFKKACEESGI 353

Query: 180 QRHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
            RHF  + T  Q NGVA  MNR+LLE  RC++  +GL K FWA+A++YA HLINRLPS+A
Sbjct: 354 VRHFTVKHT-PQQNGVAERMNRTLLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSSA 412


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  201 bits (511), Expect = 4e-57
 Identities = 96/180 (53%), Positives = 127/180 (70%)
 Frame = -1

Query: 540  CKMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCS 361
            CK+E CEHC L K+ +VK GT IH   G+LD VH DVWGP+   SLGG  +FV+F+DD S
Sbjct: 473  CKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYFVTFIDDFS 532

Query: 360  RHVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGI 181
            R VW+  M  KDE+L++F KWK  +E+QTGRKIK+L+ DN G  +Y  DPFQ++C   GI
Sbjct: 533  RRVWVFTMKSKDEMLKIFLKWKARVENQTGRKIKILRTDNGG--EYKSDPFQKICQECGI 590

Query: 180  QRHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
             RHF       Q NGV+  MN++L+E  RC++  +GL + FWA+A+ YA HL+NRLPS+A
Sbjct: 591  VRHFIVRKI-PQQNGVSEHMNKTLVEKVRCMLSNAGLGRKFWAEAVTYAQHLVNRLPSSA 649


>emb|CDP17739.1| unnamed protein product [Coffea canephora]
          Length = 435

 Score =  191 bits (486), Expect = 5e-56
 Identities = 93/180 (51%), Positives = 124/180 (68%)
 Frame = -1

Query: 540 CKMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCS 361
           CK+E CEHC L K+ +VK GT IH   G+LD VH +VWGP+   SLGG  +FV+F+DD S
Sbjct: 81  CKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSNVWGPAKTPSLGGRYYFVTFIDDFS 140

Query: 360 RHVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGI 181
           R VW+  M  KDEVLE+F KWK  +E+QTGRKIK+L+ DN G  +Y  DPFQ++    GI
Sbjct: 141 RRVWVFTMKSKDEVLEIFLKWKARVENQTGRKIKILRTDNGG--EYKSDPFQKIGQECGI 198

Query: 180 QRHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
            +HF    T  Q NGV+  MN++L+E   C++  + L + FWA+ + YA HL+NRLPS+A
Sbjct: 199 VQHFTVRKT-PQQNGVSERMNKTLVEKVHCMLSNARLGRKFWAETVTYAQHLVNRLPSSA 257


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  198 bits (503), Expect = 6e-56
 Identities = 97/180 (53%), Positives = 124/180 (68%)
 Frame = -1

Query: 540 CKMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCS 361
           CK+E CEHC LGK+ RVK GT IH   G+LD VH DVWGP+   S+GG  +FV+FVDD S
Sbjct: 387 CKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDFS 446

Query: 360 RHVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGI 181
           R VW+  M  K++VLE+F KWK  +E+ TGRKIKVLQ DN G  +Y  DPF  +C   GI
Sbjct: 447 RRVWVFTMKNKNDVLEIFLKWKAEVENHTGRKIKVLQTDNGG--EYKSDPFLNVCQDCGI 504

Query: 180 QRHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
            RHF    T  Q NGV+  MN++L+E   C++  + L + FWA+A+ YA HL+NRLPS+A
Sbjct: 505 VRHFTVRKT-PQQNGVSERMNKTLVEKVCCMLSNAELGREFWAEAVTYAQHLVNRLPSSA 563


>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
          Length = 876

 Score =  191 bits (484), Expect = 4e-53
 Identities = 95/181 (52%), Positives = 124/181 (68%)
 Frame = -1

Query: 543 TCKMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDC 364
           +CKM+ C++C LGK+ RV+   + H+  G+LD VH DVWGP+  AS+GGSR+FV+F DD 
Sbjct: 370 SCKMDLCKYCVLGKQCRVRFKPMKHKTEGILDYVHSDVWGPTREASMGGSRYFVTFTDDF 429

Query: 363 SRHVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 184
           SR +W+  M QK EV   FK WK  +E+QTGRKIK L+ DN    +Y+   F++ C + G
Sbjct: 430 SRKLWVYFMKQKSEVFSKFKLWKAEVENQTGRKIKYLRSDNG--TEYTNSQFEKFCEQHG 487

Query: 183 IQRHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSA 4
           IQRHF    T  Q NGVA  MN SL E ARCL L++GLSK FWA+ +  AC+LINR P A
Sbjct: 488 IQRHFSVRKT-PQQNGVAERMNMSLTERARCLQLKAGLSKGFWAETINMACYLINRSPRA 546

Query: 3   A 1
           +
Sbjct: 547 S 547


>gb|PKA55182.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 286

 Score =  172 bits (436), Expect = 4e-50
 Identities = 90/180 (50%), Positives = 116/180 (64%)
 Frame = -1

Query: 540 CKMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCS 361
           CK++ CE C L K+ RVK  T   R   + + VH DVWGPS   SLGG+++FV+F+DD  
Sbjct: 21  CKIDFCESCVLSKQCRVKFITSNKRSKNISEYVHSDVWGPSPVTSLGGAKYFVTFIDDYL 80

Query: 360 RHVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGI 181
           R VW+  +  K EV E FK WK  IE  TG+ IKVL+ DN G  +Y+   FQ+ CL+EGI
Sbjct: 81  RKVWVYFLQHKSEVFEKFKYWKANIEKTTGKYIKVLRTDNGG--EYTSKEFQDFCLKEGI 138

Query: 180 QRHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
            RHF    T  Q NGVA  MNR+LLE  RC+ L +GLSK FWA+++    +L+NR PS A
Sbjct: 139 TRHFTIPNT-PQQNGVAERMNRTLLERERCMRLFAGLSKSFWAESVNTTYYLVNRSPSLA 197


>gb|PNX57796.1| putative retrotransposon Ty1-copia subclass protein, partial
           [Trifolium pratense]
          Length = 285

 Score =  168 bits (426), Expect = 1e-48
 Identities = 82/178 (46%), Positives = 119/178 (66%)
 Frame = -1

Query: 534 MESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSRH 355
           ME CEHC  GK  R++  +  H+  G+LD VH DVWGP+   S GGSR+FV++VDD SR+
Sbjct: 90  MEFCEHCVYGKAHRLRFSSSKHKSRGILDYVHTDVWGPAPVTSKGGSRYFVTYVDDHSRY 149

Query: 354 VWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQR 175
            WI  +  K+EV + FK WK  +E++TGRK+K L+ DN    +Y++  F+  C +EGI R
Sbjct: 150 AWIYFLKHKNEVFDNFKCWKAMVENRTGRKLKTLRSDNG--TEYTDGAFKRFCDQEGIVR 207

Query: 174 HFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
           H+   GT  Q NGVA  +NR+LLE ARC+   SGL + +WA+++  A +++NR P ++
Sbjct: 208 HWTVRGT-PQQNGVAERLNRTLLEKARCMRSNSGLGREWWAESVATASYVVNRSPHSS 264


>gb|AOZ57162.1| integrase, partial [Coccinia grandis]
          Length = 226

 Score =  164 bits (415), Expect = 1e-47
 Identities = 85/175 (48%), Positives = 110/175 (62%)
 Frame = -1

Query: 534 MESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSRH 355
           +E CEHC  GK  R K     HR  G LD +H D WGPS   S+GGSR+F+S +DD SR 
Sbjct: 31  LEFCEHCVFGKLHRRKFSKGAHRTRGTLDYIHSDCWGPSRVESVGGSRYFMSIIDDYSRM 90

Query: 354 VWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQR 175
            W+ +M  K +  + FK+WK  IE+QTG+KIK L+ DN    ++    F E C  EGI R
Sbjct: 91  TWVFMMKHKSDAFKNFKQWKTLIENQTGKKIKRLRTDNG--LEFCGSEFNEFCKAEGIVR 148

Query: 174 HFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLP 10
           H     T  Q NGVA  MN++LLE ARC++  +GLS+ FWA+A+  AC+LINR P
Sbjct: 149 HHTVRDT-PQQNGVAERMNQTLLERARCMLSNAGLSRRFWAEAVNTACYLINRGP 202


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
 gb|ABF96427.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1326

 Score =  171 bits (432), Expect = 9e-46
 Identities = 84/177 (47%), Positives = 114/177 (64%)
 Frame = -1

Query: 537 KMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSR 358
           KM+ CEHC  GK  RVK  T +HR  G+LD VH D+WGPS  A LGG+R+ ++ +DD SR
Sbjct: 457 KMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHTDLWGPSRKAYLGGARYMLTIIDDYSR 516

Query: 357 HVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQ 178
            VW   +  KD+    FK+WK  IE QT +++KVL+ DN G  ++  D F + C +EGI 
Sbjct: 517 KVWPYFLKHKDDTFAAFKEWKVRIERQTEKEVKVLRTDNGG--EFCSDAFDDYCRKEGIV 574

Query: 177 RHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPS 7
           RH     T  Q NGVA  MNR+++  ARC++  + ++K FWA+A   AC+LINR PS
Sbjct: 575 RHHTIPYT-PQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPS 630


>gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 634

 Score =  166 bits (421), Expect = 5e-45
 Identities = 81/178 (45%), Positives = 114/178 (64%)
 Frame = -1

Query: 534 MESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSRH 355
           +E CEHC +GK +R+K  T  H   G+LD VH D+WGPS   S GG+R+F+S VDD SR 
Sbjct: 111 LEFCEHCVMGKASRLKFSTSTHSSGGVLDYVHSDLWGPSRTESHGGARYFLSIVDDFSRK 170

Query: 354 VWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQR 175
           VW+  + QK+EV + FK+WK  +E+QTGR +K L+ DN    ++ ++ F + C   G+ R
Sbjct: 171 VWVYFLKQKNEVFDRFKEWKVLVETQTGRNLKKLRTDNG--LEFCDEKFSKFCRENGVAR 228

Query: 174 HFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
           H    GT  Q NG+A   NR++LE  RC++  +GL K FW +A+  A + INR PS A
Sbjct: 229 HKTVRGT-PQKNGLAERFNRTILERVRCMLNHAGLPKSFWVEAVSSAVYCINRCPSTA 285


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  168 bits (426), Expect = 5e-45
 Identities = 83/176 (47%), Positives = 113/176 (64%)
 Frame = -1

Query: 534 MESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSRH 355
           M+ CE C  GK  RVK  T +HR  G+LD VH D+WGPS   SLGG+R+ ++ +DD SR 
Sbjct: 458 MKFCERCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRK 517

Query: 354 VWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQR 175
           VW   +  KD+    FK+WK  IE QT +++KVL+ DNAG  ++  D F + C +EGI R
Sbjct: 518 VWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNAG--EFCSDAFDDYCRKEGIVR 575

Query: 174 HFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPS 7
           H     T  Q NGVA  MNR+++  ARC++  + ++K FWA+A   AC+LINR PS
Sbjct: 576 HHTIPYT-PQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPS 630


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  168 bits (426), Expect = 6e-45
 Identities = 88/180 (48%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
 Frame = -1

Query: 534 MESCEHCDLGKKARVK--IGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCS 361
           +E C +C LGK+ RV   + +  ++  G+LD +H DVWGPS   S GG+R+FVSF+DD S
Sbjct: 424 LEFCRYCTLGKQTRVSFNLSSSENKSKGVLDYIHTDVWGPSATISKGGARYFVSFIDDFS 483

Query: 360 RHVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGI 181
           R VWI  M  K+EV   FK+WK  + +QTGRKIK L+ DN G  +Y +  F +LC  EGI
Sbjct: 484 RKVWIFFMKTKNEVFTKFKEWKAEVGNQTGRKIKCLRSDNGG--EYRDKKFLQLCKDEGI 541

Query: 180 QRHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
            RHF  + +  Q NGVA  MNR+L+E  R +   +GL + FWA+A  +AC+LINR PS A
Sbjct: 542 TRHFTVKKS-PQQNGVAERMNRTLMEKERSMRFHAGLPEEFWAEAANHACYLINRSPSRA 600


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  167 bits (422), Expect = 2e-44
 Identities = 88/175 (50%), Positives = 110/175 (62%)
 Frame = -1

Query: 525 CEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSRHVWI 346
           CEHC  GK  RVK    IH     LD +H D+WGPS   S+GG+R+F++ +DD SR VWI
Sbjct: 426 CEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGARYFLTLIDDYSRKVWI 485

Query: 345 AIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQRHFY 166
             +  K E    FK+WK  +E+QT RK+K L+ DN G E  S D F  LC +EGI RH  
Sbjct: 486 YFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDN-GLEFLSND-FNSLCQKEGIARHRT 543

Query: 165 GEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
              T  Q NG+A  MNR++LE  RC++  SGLSK FWA+A   A HLINR PS+A
Sbjct: 544 VRYT-PQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLINRSPSSA 597


>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
          Length = 1034

 Score =  166 bits (421), Expect = 2e-44
 Identities = 83/166 (50%), Positives = 109/166 (65%)
 Frame = -1

Query: 516 CDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSRHVWIAIM 337
           CD     R+K G+ IH    +LD VH DVWGP+  ASLGG  +FV+FVDD SR VW+ +M
Sbjct: 308 CDWDMLTRIKFGSAIHNTKEILDYVHSDVWGPTKVASLGGMHYFVTFVDDYSRKVWVYLM 367

Query: 336 SQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQRHFYGEG 157
            +K+EVL+VF KWKK +E+Q  RK+K L+ DN    +Y  DPF ++C  EGI RHF    
Sbjct: 368 KRKNEVLDVFLKWKKMVETQADRKVKRLRSDNG--TEYKNDPFLQVCHDEGIVRHFTVRD 425

Query: 156 TRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLIN 19
           T  Q NGVA  MNR++LE  RC++  +GL K FWA+A+ Y   + N
Sbjct: 426 T-PQQNGVAERMNRTILEKVRCMLSNAGLGKEFWAEAVTYITMMKN 470


>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
          Length = 1601

 Score =  166 bits (420), Expect = 4e-44
 Identities = 83/179 (46%), Positives = 112/179 (62%)
 Frame = -1

Query: 537 KMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSR 358
           K++ CEHC  GK  RVK  T  H   G+LD VH D+WGP+   S GG+R+ ++ VDD SR
Sbjct: 464 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSR 523

Query: 357 HVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQ 178
            VW   +  K +  +VFK+WK  +E QT RK+K+L+ DN    ++    F+  C  EGI 
Sbjct: 524 KVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNG--MEFCSKIFKSYCKSEGIV 581

Query: 177 RHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
           RH+    T  Q NGVA  MNR+++  ARCL+  +GL K FWA+A+  AC+LINR PS A
Sbjct: 582 RHYTVPHT-PQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYA 639


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  166 bits (420), Expect = 4e-44
 Identities = 83/179 (46%), Positives = 112/179 (62%)
 Frame = -1

Query: 537  KMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSR 358
            K++ CEHC  GK  RVK  T  H   G+LD VH D+WGP+   S GG+R+ ++ VDD SR
Sbjct: 671  KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSR 730

Query: 357  HVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQ 178
             VW   +  K +  +VFK+WK  +E QT RK+K+L+ DN    ++    F+  C  EGI 
Sbjct: 731  KVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNG--MEFCSKIFKSYCKSEGIV 788

Query: 177  RHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
            RH+    T  Q NGVA  MNR+++  ARCL+  +GL K FWA+A+  AC+LINR PS A
Sbjct: 789  RHYTVPHT-PQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYA 846


>gb|ABA93686.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 680

 Score =  164 bits (416), Expect = 4e-44
 Identities = 80/176 (45%), Positives = 112/176 (63%)
 Frame = -1

Query: 534 MESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSRH 355
           M+ CEHC  GK  RVK  T +HR  G+LD +H D+WGPS   S G +R+ ++ +DD SR 
Sbjct: 134 MKLCEHCVFGKDKRVKFNTSVHRTKGILDYLHADLWGPSRKPSNGCARYMLTIIDDYSRK 193

Query: 354 VWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQR 175
           VW   +  KD+    FK+WK  I+ Q  +++KVL+ DN G  ++  D F + C +EGI R
Sbjct: 194 VWTYFLKNKDDTFVAFKEWKVMIKRQIEKEVKVLRIDNGG--EFCSDAFDDYCRKEGIVR 251

Query: 174 HFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPS 7
           H     T  Q NGVA  MNR+++ MARC++  + ++K FWA+A   AC+LINRLPS
Sbjct: 252 HHTIPYT-PQQNGVAECMNRTIISMARCMLSNAHMNKCFWAEAANTACYLINRLPS 306


>gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 993

 Score =  166 bits (419), Expect = 5e-44
 Identities = 82/179 (45%), Positives = 114/179 (63%)
 Frame = -1

Query: 537 KMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSR 358
           K++ CE C +GK  R+      HR  G+LD +H D+WGP+  A+ GG+R+F+SF+DD SR
Sbjct: 391 KIDFCESCIIGKSHRLSFKLSTHRAEGILDYIHSDLWGPARVATHGGNRYFLSFIDDYSR 450

Query: 357 HVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQ 178
            VWI ++  KDE    F +WK  +E+Q  RK+KVL+ DN    ++  + F + C   GI 
Sbjct: 451 KVWIFLLKSKDETFSKFLEWKSMVENQKNRKLKVLRTDNG--LEFCNESFNKFCSDSGIV 508

Query: 177 RHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
           RH     T  Q NG+A  MNR+LL+  RCL+  SGLSK FW +AL  AC+L+NR PS+A
Sbjct: 509 RHKTVSHT-PQQNGLAERMNRTLLDRVRCLLFSSGLSKFFWGEALSTACYLVNRTPSSA 566


>gb|KYP59920.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 259

 Score =  155 bits (393), Expect = 5e-44
 Identities = 83/177 (46%), Positives = 112/177 (63%)
 Frame = -1

Query: 537 KMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSR 358
           +++ CEHC LGK  R+K     H     LD VH + WGPS   SLGG R+F+S +DD SR
Sbjct: 27  ELKFCEHCVLGKHHRIKFPKAQHTTKSTLDYVHSNCWGPSRVPSLGGGRYFLSIIDDYSR 86

Query: 357 HVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQ 178
             WI IM  K++  + FK+WK  +E+QTG++IK L+ DN G E  S + F + C +EGI 
Sbjct: 87  MTWIFIMKHKNQAFKYFKEWKILVENQTGKRIKRLRTDN-GLEFCSAE-FNDYCKKEGIV 144

Query: 177 RHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPS 7
           R +    T  Q NGVA  MNR+LLE  R L+  +GL+K FWA+A+  AC+L+N  PS
Sbjct: 145 RQYTVRNT-PQQNGVAERMNRTLLEKRRYLLSNAGLTKSFWAEAVNTACYLVNGSPS 200


>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
          Length = 778

 Score =  165 bits (417), Expect = 5e-44
 Identities = 82/179 (45%), Positives = 112/179 (62%)
 Frame = -1

Query: 537 KMESCEHCDLGKKARVKIGTVIHRPSGLLDLVHVDVWGPSIHASLGGSRWFVSFVDDCSR 358
           K++ CEHC  GK  RVK  T  H   G+LD VH D+WGP+   S GG+R+ ++ VDD SR
Sbjct: 430 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSR 489

Query: 357 HVWIAIMSQKDEVLEVFKKWKKCIESQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQ 178
            VW   +  K +  +VFK+WK  +E QT RK+K+L+ DN    ++    F+  C  EGI 
Sbjct: 490 KVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNG--MEFCSKIFKSYCKSEGIV 547

Query: 177 RHFYGEGTRVQLNGVATLMNRSLLEMARCLILQSGLSKPFWADALLYACHLINRLPSAA 1
           RH+    T  Q NGVA  MNR+++  ARC++  +GL K FWA+A+  AC+LINR PS A
Sbjct: 548 RHYTIPHT-PQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYA 605