BLASTX nr result

ID: Ophiopogon26_contig00023917 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00023917
         (374 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020254926.1| double-stranded RNA-binding protein 8-like [...    67   2e-10

>ref|XP_020254926.1| double-stranded RNA-binding protein 8-like [Asparagus officinalis]
 gb|ONK78722.1| uncharacterized protein A4U43_C02F21750 [Asparagus officinalis]
          Length = 336

 Score = 66.6 bits (161), Expect = 2e-10
 Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -3

Query: 237 GDKAEKSENGECLIPLDKEVDASMAPSRD-ENEQGSGIMKDEPRSQTNELTPSAMETNGS 61
           GDK+ K EN     P+DK  + SM  + D ENE+G+  M ++P++Q +E   SA++TNGS
Sbjct: 236 GDKSAKPENDVPHNPVDKMEEVSMISNGDDENERGNVGMNNKPQTQADESIASAIDTNGS 295

Query: 60  CKDEKQDGSTITIAGRFEEP 1
           CKDEKQ  S      RFEEP
Sbjct: 296 CKDEKQYESAEIKPERFEEP 315