BLASTX nr result

ID: Ophiopogon26_contig00023830 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00023830
         (434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243976.1| cyclin-A3-1-like isoform X2 [Asparagus offic...    60   1e-07
ref|XP_003578446.1| PREDICTED: cyclin-A3-2-like [Brachypodium di...    58   6e-07
ref|NP_001147065.1| cyclin-A2 [Zea mays] >gi|195607004|gb|ACG253...    57   1e-06
ref|XP_023157815.1| cyclin-A2 isoform X1 [Zea mays]                    57   1e-06
ref|XP_020243975.1| cyclin-A3-1-like isoform X1 [Asparagus offic...    55   5e-06
ref|XP_020095438.1| LOW QUALITY PROTEIN: cyclin-A3-1-like [Anana...    55   7e-06
ref|XP_020177944.1| cyclin-A3-2-like [Aegilops tauschii subsp. t...    55   7e-06
ref|XP_002442399.1| cyclin-A3-2 [Sorghum bicolor] >gi|241943092|...    55   8e-06

>ref|XP_020243976.1| cyclin-A3-1-like isoform X2 [Asparagus officinalis]
 gb|ONK60020.1| uncharacterized protein A4U43_C08F13370 [Asparagus officinalis]
          Length = 358

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -3

Query: 432 DLQLSRKRYCSSGIREKYNQDRFKCVSTLLPPLKIPTFYFEGF 304
           DLQL++K+   + +REKY Q +FK V+TL+PPL+IPT YFEGF
Sbjct: 316 DLQLNKKKSSLTAVREKYKQHKFKFVTTLVPPLEIPTSYFEGF 358


>ref|XP_003578446.1| PREDICTED: cyclin-A3-2-like [Brachypodium distachyon]
 gb|KQJ86127.1| hypothetical protein BRADI_4g03470v3 [Brachypodium distachyon]
          Length = 381

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -3

Query: 432 DLQLSRKRYCSSGIREKYNQDRFKCVSTLLPPLKIPTFYFE 310
           DLQL+RK    + IR+KY Q RFKCVSTLLPP++IP  YF+
Sbjct: 338 DLQLNRKGLSLTAIRDKYKQHRFKCVSTLLPPVEIPASYFQ 378


>ref|NP_001147065.1| cyclin-A2 [Zea mays]
 gb|ACG25332.1| cyclin-A2 [Zea mays]
 gb|ONM01605.1| Cyclin-A2 [Zea mays]
          Length = 423

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -3

Query: 432 DLQLSRKRYCSSGIREKYNQDRFKCVSTLLPPLKIPTFYFE 310
           DLQL+RK    + IR+KY Q +FKCVSTLLPP+ +PT YFE
Sbjct: 379 DLQLNRKFPSLTAIRDKYKQHKFKCVSTLLPPVVVPTSYFE 419


>ref|XP_023157815.1| cyclin-A2 isoform X1 [Zea mays]
          Length = 431

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -3

Query: 432 DLQLSRKRYCSSGIREKYNQDRFKCVSTLLPPLKIPTFYFE 310
           DLQL+RK    + IR+KY Q +FKCVSTLLPP+ +PT YFE
Sbjct: 387 DLQLNRKFPSLTAIRDKYKQHKFKCVSTLLPPVVVPTSYFE 427


>ref|XP_020243975.1| cyclin-A3-1-like isoform X1 [Asparagus officinalis]
          Length = 359

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 26/44 (59%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = -3

Query: 432 DLQLSRKRYCSSGIREKYNQDR-FKCVSTLLPPLKIPTFYFEGF 304
           DLQL++K+   + +REKY Q + FK V+TL+PPL+IPT YFEGF
Sbjct: 316 DLQLNKKKSSLTAVREKYKQHKQFKFVTTLVPPLEIPTSYFEGF 359


>ref|XP_020095438.1| LOW QUALITY PROTEIN: cyclin-A3-1-like [Ananas comosus]
          Length = 373

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = -3

Query: 432 DLQLSRKRYCSSGIREKYNQDRFKCVSTLLPPLKIPTFYFEGF*G 298
           DLQL+RK      IREKY Q RFKCVS+LL P +IP  YF+ F G
Sbjct: 329 DLQLNRKGSNLVAIREKYKQHRFKCVSSLLSPQEIPALYFDNFKG 373


>ref|XP_020177944.1| cyclin-A3-2-like [Aegilops tauschii subsp. tauschii]
          Length = 378

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = -3

Query: 432 DLQLSRKRYCSSGIREKYNQDRFKCVSTLLPPLKIPTFYFE 310
           DLQL+RK      IR+KY Q RFKCVS LLPP++IP  YF+
Sbjct: 334 DLQLNRKGQSLPAIRDKYKQHRFKCVSMLLPPVEIPASYFQ 374


>ref|XP_002442399.1| cyclin-A3-2 [Sorghum bicolor]
 gb|EES16237.1| hypothetical protein SORBI_3008G143800 [Sorghum bicolor]
 gb|OQU79434.1| hypothetical protein SORBI_3008G143800 [Sorghum bicolor]
          Length = 428

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/41 (63%), Positives = 30/41 (73%)
 Frame = -3

Query: 432 DLQLSRKRYCSSGIREKYNQDRFKCVSTLLPPLKIPTFYFE 310
           DLQL+RK      IR+KY Q +FKCVSTLLPP+ IP  YFE
Sbjct: 384 DLQLNRKCPSLMAIRDKYKQHKFKCVSTLLPPVVIPASYFE 424


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