BLASTX nr result
ID: Ophiopogon26_contig00023747
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00023747
(436 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP20226.1| unnamed protein product, partial [Coffea canephora] 76 4e-25
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] 67 5e-24
gb|KYP71432.1| Retrovirus-related Pol polyprotein from transposo... 67 2e-21
gb|KYP50175.1| Copia protein [Cajanus cajan] 67 2e-21
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group] 69 3e-21
ref|XP_017181741.1| PREDICTED: uncharacterized mitochondrial pro... 70 7e-21
gb|KYP47718.1| Retrovirus-related Pol polyprotein from transposo... 69 8e-21
gb|ABA95820.1| retrotransposon protein, putative, unclassified [... 69 1e-20
ref|XP_008392173.1| PREDICTED: uncharacterized protein LOC103454... 65 1e-20
emb|CAN60813.1| hypothetical protein VITISV_038722 [Vitis vinifera] 66 2e-20
ref|XP_020418020.1| uncharacterized protein LOC109948728 [Prunus... 66 4e-20
gb|KYP65915.1| Retrovirus-related Pol polyprotein from transposo... 64 2e-19
gb|KYP39032.1| Retrovirus-related Pol polyprotein from transposo... 65 3e-19
gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposo... 67 4e-19
gb|EOY12702.1| Uncharacterized protein TCM_031224 [Theobroma cacao] 62 7e-19
gb|KYP35737.1| Retrovirus-related Pol polyprotein from transposo... 62 1e-18
gb|KYP32699.1| Retrovirus-related Pol polyprotein from transposo... 62 1e-18
gb|KYP48710.1| Retrovirus-related Pol polyprotein from transposo... 61 2e-18
gb|PKA47383.1| Retrovirus-related Pol polyprotein from transposo... 64 2e-18
gb|OMO54668.1| Zinc finger, CCHC-type [Corchorus capsularis] 60 2e-18
>emb|CDP20226.1| unnamed protein product, partial [Coffea canephora]
Length = 324
Score = 76.3 bits (186), Expect(2) = 4e-25
Identities = 31/56 (55%), Positives = 49/56 (87%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMG 392
+H+ TR+IAIK+HF+R+AI++GE+++K+ K+EDQ+A IFT LPK KF++ RE++G
Sbjct: 71 YHSRTRHIAIKHHFIRDAIEDGEVELKFCKSEDQVADIFTKALPKDKFNYFREMLG 126
Score = 66.2 bits (160), Expect(2) = 4e-25
Identities = 27/46 (58%), Positives = 39/46 (84%)
Frame = +2
Query: 8 LGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFG 145
+GSG++SW S+KQ+S+ SS EAEY+ ASLATS+ +WL+++LED G
Sbjct: 1 IGSGVFSWASKKQQSVAQSSAEAEYVSASLATSQTIWLRRILEDIG 46
>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 67.0 bits (162), Expect(3) = 5e-24
Identities = 30/46 (65%), Positives = 40/46 (86%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLED 139
F+LGSG+ SW+S+KQ S+ SS EAEYI ASLATS+A+WL+++LED
Sbjct: 1285 FSLGSGVISWVSKKQGSVAQSSAEAEYISASLATSQAIWLRRILED 1330
Score = 66.6 bits (161), Expect(3) = 5e-24
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = +3
Query: 228 HNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGVQPHH 407
H+ TR+IA+KYHF++E I +GE+++ Y K+E+Q A IFT LP K R+L+GV+ H
Sbjct: 1358 HSRTRHIAVKYHFIKEVISDGEVQLMYCKSEEQXADIFTKALPLEKLVHFRKLLGVEELH 1417
Score = 25.0 bits (53), Expect(3) = 5e-24
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 172 KNKATTILCDNKFVIA 219
+N+AT +LCDNK IA
Sbjct: 1335 QNEATYLLCDNKSAIA 1350
>gb|KYP71432.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 515
Score = 67.4 bits (163), Expect(3) = 2e-21
Identities = 30/58 (51%), Positives = 45/58 (77%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGVQ 398
HH+ T++IAIKYHF+REA EIK++Y KT++Q+A IFT LP+++F R ++GV+
Sbjct: 450 HHSRTKHIAIKYHFIREAETTREIKMEYCKTKEQVADIFTKALPRARFEQFRTMIGVR 507
Score = 60.8 bits (146), Expect(3) = 2e-21
Identities = 25/48 (52%), Positives = 39/48 (81%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFG 145
F+LGSGI+SW S+KQ ++ S+ EAEY+ A+ ATS+A+WL+++L + G
Sbjct: 378 FSLGSGIFSWASKKQATVAQSTAEAEYVAAAEATSQAIWLRRILAEIG 425
Score = 21.9 bits (45), Expect(3) = 2e-21
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 184 TTILCDNKFVIA 219
TTI CDNK IA
Sbjct: 432 TTIYCDNKSTIA 443
>gb|KYP50175.1| Copia protein [Cajanus cajan]
Length = 309
Score = 67.4 bits (163), Expect(3) = 2e-21
Identities = 30/58 (51%), Positives = 45/58 (77%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGVQ 398
HH+ T++IAIKYHF+REA EIK++Y KT++Q+A IFT LP+++F R ++GV+
Sbjct: 244 HHSRTKHIAIKYHFIREAETTREIKMEYCKTKEQVADIFTKALPRARFEQFRTMIGVR 301
Score = 60.8 bits (146), Expect(3) = 2e-21
Identities = 25/48 (52%), Positives = 39/48 (81%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFG 145
F+LGSGI+SW S+KQ ++ S+ EAEY+ A+ ATS+A+WL+++L + G
Sbjct: 172 FSLGSGIFSWASKKQATVAQSTAEAEYVAAAEATSQAIWLRRILAEIG 219
Score = 21.9 bits (45), Expect(3) = 2e-21
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 184 TTILCDNKFVIA 219
TTI CDNK IA
Sbjct: 226 TTIYCDNKSTIA 237
>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1136
Score = 68.9 bits (167), Expect(2) = 3e-21
Identities = 30/56 (53%), Positives = 44/56 (78%)
Frame = +3
Query: 228 HNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGV 395
H+ T++IAIKYH++REA+D E+K+++ +T++QLA IFT L K KF REL+GV
Sbjct: 1078 HDRTKHIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFICDRELIGV 1133
Score = 60.5 bits (145), Expect(2) = 3e-21
Identities = 24/48 (50%), Positives = 38/48 (79%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFG 145
F+LGSG++SW ++KQ + +SS EAEY+ AS A S+ +WL++++ED G
Sbjct: 1005 FSLGSGMWSWSTKKQNIVALSSAEAEYVAASKAVSQVVWLRRIMEDLG 1052
>ref|XP_017181741.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Malus domestica]
Length = 421
Score = 70.1 bits (170), Expect(2) = 7e-21
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 228 HNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGVQP 401
H TR+I KYHF+REA+ +G I VKY ++E+QLA IFT LPK +F++ R +GV+P
Sbjct: 354 HQRTRHINRKYHFIREALQQGSIDVKYCRSEEQLADIFTKALPKDRFNYLRMKLGVKP 411
Score = 58.2 bits (139), Expect(2) = 7e-21
Identities = 25/48 (52%), Positives = 38/48 (79%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFG 145
F+ GSG +SW S KQ ++ +S+ EAEY+ A+ AT++A+WL+ VL+DFG
Sbjct: 281 FSFGSGTFSWASVKQNTVALSTAEAEYVSAAGATAQAIWLRFVLDDFG 328
>gb|KYP47718.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 255
Score = 68.9 bits (167), Expect(3) = 8e-21
Identities = 30/57 (52%), Positives = 43/57 (75%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGV 395
HH T++IAIKYHF+REA +I+++Y TEDQ+A+IFT LP++KF R ++GV
Sbjct: 190 HHQRTKHIAIKYHFIREAETTKQIQLEYCSTEDQVAHIFTKALPRAKFEQLRTMLGV 246
Score = 58.5 bits (140), Expect(3) = 8e-21
Identities = 25/46 (54%), Positives = 36/46 (78%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLED 139
F+LGSG +SW S+KQ + S+TEAEYI A+ TS+A+WL ++LE+
Sbjct: 118 FSLGSGFFSWASKKQAKVAQSTTEAEYIAAAETTSQAIWLWRILEE 163
Score = 20.4 bits (41), Expect(3) = 8e-21
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 142 WSEQEVTSLIKNKATTILCDNKFVI 216
W E S +++ T I CDN+ I
Sbjct: 158 WRILEEMSEQQDRPTVIYCDNRSTI 182
>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1142
Score = 68.6 bits (166), Expect(2) = 1e-20
Identities = 30/56 (53%), Positives = 44/56 (78%)
Frame = +3
Query: 228 HNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGV 395
H+ T++IAIKYH++REA+D E+K+++ +T++QLA IFT L K KF REL+GV
Sbjct: 1084 HDRTKHIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRDRELIGV 1139
Score = 58.9 bits (141), Expect(2) = 1e-20
Identities = 24/48 (50%), Positives = 37/48 (77%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFG 145
F+LGSG+ SW ++KQ + +SS EAEY+ AS A S+ +WL++++ED G
Sbjct: 1011 FSLGSGMCSWSTKKQNIVALSSAEAEYVAASKAVSQVVWLRRIMEDLG 1058
>ref|XP_008392173.1| PREDICTED: uncharacterized protein LOC103454355 [Malus domestica]
Length = 1280
Score = 65.5 bits (158), Expect(2) = 1e-20
Identities = 28/57 (49%), Positives = 42/57 (73%)
Frame = +3
Query: 228 HNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGVQ 398
H TR+I KYHF+R+AI +G I++ Y +TE+QLA +FT LPK +F + R+ +GV+
Sbjct: 928 HQKTRHINRKYHFIRDAIQDGTIELHYCRTEEQLADMFTKALPKDRFEYLRDALGVK 984
Score = 61.6 bits (148), Expect(2) = 1e-20
Identities = 27/48 (56%), Positives = 39/48 (81%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFG 145
F+ GSG++SW S KQ S+ +S+ EAEY+ A++AT++AMWL+ VL DFG
Sbjct: 855 FSFGSGVFSWASVKQCSVALSTAEAEYVSAAVATTQAMWLRFVLTDFG 902
>emb|CAN60813.1| hypothetical protein VITISV_038722 [Vitis vinifera]
Length = 566
Score = 65.9 bits (159), Expect(3) = 2e-20
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = +3
Query: 228 HNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGVQPHH 407
H+ TR+I +KYHF++EAI E+++ Y K E+Q+A IFT LP K R+L+GV+ HH
Sbjct: 500 HSRTRHIVVKYHFIKEAISYCEVQLMYCKLEEQVADIFTKALPLEKLVHFRKLLGVEEHH 559
Score = 55.8 bits (133), Expect(3) = 2e-20
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLED 139
F+ GS + SW+S+KQ + S TE +Y ASLATS+A+WL+++LED
Sbjct: 427 FSFGSSVISWVSKKQGLVAQSPTEVQYSSASLATSQAIWLRRILED 472
Score = 25.0 bits (53), Expect(3) = 2e-20
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 172 KNKATTILCDNKFVIA 219
+N+AT +LCDNK IA
Sbjct: 477 QNEATYLLCDNKSAIA 492
>ref|XP_020418020.1| uncharacterized protein LOC109948728 [Prunus persica]
Length = 641
Score = 65.9 bits (159), Expect(2) = 4e-20
Identities = 27/58 (46%), Positives = 43/58 (74%)
Frame = +3
Query: 228 HNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGVQP 401
H T++I KYHF+R+A+ +G + +KY K+E+Q+ IFT LPK +F++ R L+GV+P
Sbjct: 574 HQKTKHINRKYHFIRDALQDGVVDLKYCKSEEQVVDIFTKALPKDRFNYLRGLLGVKP 631
Score = 59.7 bits (143), Expect(2) = 4e-20
Identities = 26/48 (54%), Positives = 38/48 (79%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFG 145
F+ GSG++SW KQ S+ +S+ EA+Y+ AS AT++A+WL+ VLEDFG
Sbjct: 501 FSFGSGVFSWALVKQHSVALSTVEAKYVSASEATTQAIWLRFVLEDFG 548
>gb|KYP65915.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 64.3 bits (155), Expect(3) = 2e-19
Identities = 27/58 (46%), Positives = 44/58 (75%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGVQ 398
HH+ T++IAIKYHF++E +IK++Y KTE+Q+A +FT LP+++F R ++GV+
Sbjct: 625 HHSRTKHIAIKYHFIKEVETTKKIKMEYCKTEEQVADVFTKALPRTRFEQFRTMIGVK 682
Score = 56.6 bits (135), Expect(3) = 2e-19
Identities = 23/46 (50%), Positives = 37/46 (80%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLED 139
F+LGSGI+SW S+K ++ S+ EAEY+ A+ ATS+A+WL+++L +
Sbjct: 553 FSLGSGIFSWASKKHATVAQSTAEAEYVAAAEATSQAIWLRRILAE 598
Score = 21.9 bits (45), Expect(3) = 2e-19
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 184 TTILCDNKFVIA 219
TTI CDNK IA
Sbjct: 607 TTIYCDNKSTIA 618
>gb|KYP39032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 255
Score = 65.5 bits (158), Expect(3) = 3e-19
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGV 395
HH T++IAIKYHF+REA +I+++Y TEDQ+ IFT LP++KF R ++GV
Sbjct: 190 HHQRTKHIAIKYHFIREAETTKQIQLEYCSTEDQVVDIFTKALPRAKFEQLRTMLGV 246
Score = 55.8 bits (133), Expect(3) = 3e-19
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLED 139
F+LGSG +SW S+KQ ++ S+ EAEYI A TS+A+WL ++LE+
Sbjct: 118 FSLGSGFFSWASKKQATVAQSTAEAEYITAVETTSQAIWLWRILEE 163
Score = 21.2 bits (43), Expect(3) = 3e-19
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 142 WSEQEVTSLIKNKATTILCDNKFVIA 219
W E S ++ T I CDNK IA
Sbjct: 158 WRILEEMSEQQDGPTIIYCDNKSAIA 183
>gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 703
Score = 67.0 bits (162), Expect(2) = 4e-19
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGV 395
HH T++IAIKYHF+REA +I+++Y TEDQ+A IFT LP++KF R ++G+
Sbjct: 638 HHQRTKHIAIKYHFIREAETTKQIQLEYYSTEDQVAEIFTKALPRAKFEQLRTMLGI 694
Score = 55.1 bits (131), Expect(2) = 4e-19
Identities = 23/46 (50%), Positives = 36/46 (78%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLED 139
F+LGS +SW S+KQ ++ S+ EAEYI A+ TS+A+WL+++LE+
Sbjct: 566 FSLGSRFFSWASKKQPTVAQSTVEAEYIAAAETTSQAIWLRRILEE 611
>gb|EOY12702.1| Uncharacterized protein TCM_031224 [Theobroma cacao]
Length = 3109
Score = 61.6 bits (148), Expect(2) = 7e-19
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGV 395
HH T++I +KYH +REAI G+I +K+ +T+DQLA + T L K KF RE +GV
Sbjct: 1016 HHGRTKHIRVKYHAIREAIKIGDIFLKHCRTDDQLADVLTKSLGKDKFELFRERLGV 1072
Score = 59.7 bits (143), Expect(2) = 7e-19
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 5 TLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFGVN 151
+ GS ++SW S+KQE + SS EAEYI + AT++ +WL+K+LED G N
Sbjct: 945 SFGSAVFSWSSKKQEVVAQSSAEAEYISVASATNQILWLRKILEDLGFN 993
>gb|KYP35737.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 483
Score = 62.0 bits (149), Expect(2) = 1e-18
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEG-EIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGV 395
HH T++IAIKYHF+REA +I+++Y TEDQ+A IFT LP++KF + ++GV
Sbjct: 417 HHQRTKHIAIKYHFIREAAKTTKQIQLEYCSTEDQVANIFTKALPRAKFEQLQTMLGV 474
Score = 58.9 bits (141), Expect(2) = 1e-18
Identities = 24/46 (52%), Positives = 38/46 (82%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLED 139
F+LGSG +SW+S+KQ ++ S+ EAEYI A+ TS+A+WL+++LE+
Sbjct: 345 FSLGSGFFSWVSKKQATIAQSTVEAEYIAAAETTSQAIWLRRILEE 390
>gb|KYP32699.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 146
Score = 61.6 bits (148), Expect(2) = 1e-18
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGVQ 398
HH+ T++IAIKYHF+RE EIK+ Y K E+Q+A IFT LP+ +F ++GV+
Sbjct: 81 HHSRTKHIAIKYHFIREVETTKEIKMVYCKIEEQVADIFTKALPRGRFEQFHTMIGVR 138
Score = 58.9 bits (141), Expect(2) = 1e-18
Identities = 24/48 (50%), Positives = 38/48 (79%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFG 145
F+LGSGI+SW S+KQ ++ + EAEY+ A+ ATS+A+WL+++L + G
Sbjct: 9 FSLGSGIFSWASKKQATVAQLTAEAEYVAATKATSQAIWLRRILAEMG 56
>gb|KYP48710.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 255
Score = 61.2 bits (147), Expect(2) = 2e-18
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +3
Query: 225 HHNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGV 395
+H T++IAIKYHF+RE +I+++Y EDQ+A IFT LP++KF R ++GV
Sbjct: 190 YHQRTKHIAIKYHFIREVETTKQIQLEYCSPEDQVAEIFTKALPRAKFEQLRTMLGV 246
Score = 58.9 bits (141), Expect(2) = 2e-18
Identities = 24/46 (52%), Positives = 38/46 (82%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLED 139
F+LGSG +SW S+KQ ++ S+ EAEYI+A+ TS+A+WL+++LE+
Sbjct: 118 FSLGSGFFSWASKKQATVAQSTAEAEYIVATETTSQAIWLRRILEE 163
>gb|PKA47383.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
gb|PKA63422.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 1076
Score = 63.9 bits (154), Expect(2) = 2e-18
Identities = 27/60 (45%), Positives = 44/60 (73%)
Frame = +3
Query: 228 HNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGVQPHH 407
H+ T++I IK+HF+R+A+ EG ++ K+ TE+QLA I T PL K+KF ++ +G+QP +
Sbjct: 1011 HDRTKHIQIKFHFIRDAVKEGLVEFKFCSTENQLADILTKPLTKNKFINQKKEIGIQPKY 1070
Score = 55.8 bits (133), Expect(2) = 2e-18
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLEDFGV 148
F L I SWMS+KQ + SS EAEYI + ATS+ MWL+++L D GV
Sbjct: 938 FFLNGAICSWMSKKQSVVAQSSAEAEYIAMAKATSQLMWLKRILADLGV 986
>gb|OMO54668.1| Zinc finger, CCHC-type [Corchorus capsularis]
Length = 979
Score = 60.1 bits (144), Expect(2) = 2e-18
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = +3
Query: 228 HNHTRYIAIKYHFVREAIDEGEIKVKYMKTEDQLAYIFTNPLPKSKFHFPRELMGV 395
H T++ IK+HF+REA + GE+++ + +TE+Q+A I T PLP ++F RE +GV
Sbjct: 907 HGRTKHFKIKFHFIREAQENGEVELIHCRTEEQIADILTKPLPNNRFEDLREKLGV 962
Score = 59.7 bits (143), Expect(2) = 2e-18
Identities = 23/46 (50%), Positives = 37/46 (80%)
Frame = +2
Query: 2 FTLGSGIYSWMSRKQESMTMSSTEAEYILASLATSKAMWLQKVLED 139
F+LGSG+++W+S+KQE + S+ EAEY+ AS A ++A+W+ K+L D
Sbjct: 834 FSLGSGVFNWLSKKQEVVAQSTAEAEYVAASCAVNQAIWIMKILTD 879