BLASTX nr result

ID: Ophiopogon26_contig00023664 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00023664
         (350 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020267727.1| auxin-responsive protein IAA33 [Asparagus of...    59   2e-08

>ref|XP_020267727.1| auxin-responsive protein IAA33 [Asparagus officinalis]
 gb|ONK69627.1| uncharacterized protein A4U43_C05F25020 [Asparagus officinalis]
          Length = 163

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 43/84 (51%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = -1

Query: 251 MNTVNSHPAEALKRPRWNVDRSVLCMTGGRGAATDPPSLLAPSAATKKLLGLXXXXXXXX 72
           MNT+NSH   ALKR R   D S L MT    +   PP    P   TKKLLGL        
Sbjct: 1   MNTINSHQ-HALKRQRLTSDNSPLYMT----SLIQPP----PHPTTKKLLGLSMPVDADV 51

Query: 71  XXA-IVPPVTVVLEGRSICQRIHL 3
             + IVP VTVVLEGRSIC RI L
Sbjct: 52  AASAIVPSVTVVLEGRSICHRIQL 75


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