BLASTX nr result

ID: Ophiopogon26_contig00023663 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00023663
         (388 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020267727.1| auxin-responsive protein IAA33 [Asparagus of...    77   4e-15
ref|XP_010929472.1| PREDICTED: auxin-responsive protein IAA33-li...    53   6e-06

>ref|XP_020267727.1| auxin-responsive protein IAA33 [Asparagus officinalis]
 gb|ONK69627.1| uncharacterized protein A4U43_C05F25020 [Asparagus officinalis]
          Length = 163

 Score = 77.0 bits (188), Expect = 4e-15
 Identities = 52/84 (61%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
 Frame = -3

Query: 254 MNTVNSHPAEALKRPRWNVDRSVLYMTGGRGSATDPPSLLAPSVATKKLLGLSM-ADANM 78
           MNT+NSH   ALKR R   D S LYMT    S   PP    P   TKKLLGLSM  DA++
Sbjct: 1   MNTINSHQ-HALKRQRLTSDNSPLYMT----SLIQPP----PHPTTKKLLGLSMPVDADV 51

Query: 77  AASAIVPPVTVVLEGRSIGQRIHL 6
           AASAIVP VTVVLEGRSI  RI L
Sbjct: 52  AASAIVPSVTVVLEGRSICHRIQL 75


>ref|XP_010929472.1| PREDICTED: auxin-responsive protein IAA33-like [Elaeis guineensis]
          Length = 180

 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
 Frame = -3

Query: 254 MNTVNSHPAEALKRPRWNVDRSVLYMT-----------GGRGSATDPPSLLAPSVATKKL 108
           MN  +S   EA KRP W+ + S+   T           G  G+A+   +L  P + ++KL
Sbjct: 1   MNRFDSR-REAPKRP-WDENGSLYLSTSAPNFYPGITSGAGGNASAMRALPPPVINSRKL 58

Query: 107 LGLSMADANMAASAIVPPVTVVLEGRSIGQRIHL 6
            GLS A  +  AS +VP VTVVLEGRSI  RIHL
Sbjct: 59  PGLSTALDDHVASTVVPSVTVVLEGRSICHRIHL 92


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