BLASTX nr result
ID: Ophiopogon26_contig00023519
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00023519
(817 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008797750.1| PREDICTED: DNA-directed RNA polymerases I an... 292 1e-94
ref|XP_010942580.2| PREDICTED: DNA-directed RNA polymerases I an... 293 2e-94
ref|XP_009412082.1| PREDICTED: DNA-directed RNA polymerases I an... 288 6e-93
ref|XP_018685544.1| PREDICTED: DNA-directed RNA polymerases I an... 288 7e-93
gb|OAY65858.1| DNA-directed RNA polymerases I and III subunit rp... 282 3e-91
gb|OAY71289.1| DNA-directed RNA polymerases I and III subunit rp... 281 9e-91
ref|XP_020103492.1| DNA-directed RNA polymerases I and III subun... 282 1e-90
gb|OAY76273.1| DNA-directed RNA polymerases I and III subunit rp... 282 1e-90
ref|XP_020103490.1| DNA-directed RNA polymerases I and III subun... 282 1e-90
ref|XP_009407931.1| PREDICTED: DNA-directed RNA polymerases I an... 282 1e-90
ref|XP_020103496.1| DNA-directed RNA polymerases I and III subun... 281 3e-90
ref|XP_020103493.1| DNA-directed RNA polymerases I and III subun... 271 1e-86
ref|XP_020103497.1| DNA-directed RNA polymerases I and III subun... 270 3e-86
ref|XP_021288216.1| DNA-directed RNA polymerases I and III subun... 268 7e-85
ref|XP_007020444.2| PREDICTED: DNA-directed RNA polymerases I an... 267 1e-84
gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma ... 267 1e-84
ref|XP_010248372.1| PREDICTED: DNA-directed RNA polymerases I an... 264 7e-84
ref|XP_010248371.1| PREDICTED: DNA-directed RNA polymerases I an... 264 2e-83
gb|PKA45703.1| DNA-directed RNA polymerase II subunit RPB3-A [Ap... 263 4e-83
ref|XP_012456188.1| PREDICTED: DNA-directed RNA polymerases I an... 257 5e-83
>ref|XP_008797750.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1
[Phoenix dactylifera]
Length = 367
Score = 292 bits (747), Expect = 1e-94
Identities = 143/167 (85%), Positives = 156/167 (93%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
+VSALDMPDVP GQLPEHL+LQRTRVVCK+DAPIHTE + YSGAYA+MGVDNSL+L+SFC
Sbjct: 3 RVSALDMPDVPMGQLPEHLQLQRTRVVCKADAPIHTEAIQYSGAYASMGVDNSLRLESFC 62
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
+NFK+ V LTEDEMEFDMIGIDA+LANAFRRILIAEVPTMAIEKVL+ NNTSVIADEVL
Sbjct: 63 KNFKIEVIRLTEDEMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLMVNNTSVIADEVL 122
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIPL ADPRLF+YLSEND PNERNTIVYKLDV C+KGGPR T
Sbjct: 123 AHRLGLIPLNADPRLFEYLSENDSPNERNTIVYKLDVSCRKGGPRMT 169
>ref|XP_010942580.2| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1
[Elaeis guineensis]
Length = 404
Score = 293 bits (749), Expect = 2e-94
Identities = 146/178 (82%), Positives = 156/178 (87%)
Frame = +2
Query: 29 CIYLVEMGKKEKVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMG 208
C L KVSALDMPDVP GQLPEHL+LQRTRVVCK+DAPIHTE + YSGAYA+MG
Sbjct: 29 CSTLAVEANMPKVSALDMPDVPMGQLPEHLQLQRTRVVCKADAPIHTEAIQYSGAYASMG 88
Query: 209 VDNSLQLDSFCENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVA 388
VDNSLQL+SFC NFK+ V LTEDE+EFDMIGIDA+LANAFRRILIAEVPTMAIEKVL+
Sbjct: 89 VDNSLQLESFCNNFKIEVIRLTEDEIEFDMIGIDASLANAFRRILIAEVPTMAIEKVLMV 148
Query: 389 NNTSVIADEVLAHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
NNTSVIADEVLAHRLGLIPL ADP LF+YLSEND PNERNTIVYKLDV CKKGGPR T
Sbjct: 149 NNTSVIADEVLAHRLGLIPLNADPSLFEYLSENDSPNERNTIVYKLDVSCKKGGPRMT 206
>ref|XP_009412082.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 368
Score = 288 bits (736), Expect = 6e-93
Identities = 141/167 (84%), Positives = 153/167 (91%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
KVSALDMPDVP GQLPEHL LQRTRVVCK+DAPIHTEG+ YSGAYA++GVDNS+ +DSFC
Sbjct: 4 KVSALDMPDVPMGQLPEHLHLQRTRVVCKADAPIHTEGIQYSGAYASIGVDNSVGVDSFC 63
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
ENFKV + LT DE+EFDMIGIDA+LANAFRRILIAEVPTMAIEKVL+ NNTSV+ADEVL
Sbjct: 64 ENFKVKLVRLTNDEIEFDMIGIDASLANAFRRILIAEVPTMAIEKVLMVNNTSVVADEVL 123
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIPL ADPRLF+YLSEND PNERNTIVYKLDV CKKG PR T
Sbjct: 124 AHRLGLIPLNADPRLFEYLSENDAPNERNTIVYKLDVSCKKGSPRVT 170
>ref|XP_018685544.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 369
Score = 288 bits (736), Expect = 7e-93
Identities = 141/167 (84%), Positives = 153/167 (91%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
KVSALDMPDVP GQLPEHL LQRTRVVCK+DAPIHTEG+ YSGAYA++GVDNS+ +DSFC
Sbjct: 4 KVSALDMPDVPMGQLPEHLHLQRTRVVCKADAPIHTEGIQYSGAYASIGVDNSVGVDSFC 63
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
ENFKV + LT DE+EFDMIGIDA+LANAFRRILIAEVPTMAIEKVL+ NNTSV+ADEVL
Sbjct: 64 ENFKVKLVRLTNDEIEFDMIGIDASLANAFRRILIAEVPTMAIEKVLMVNNTSVVADEVL 123
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIPL ADPRLF+YLSEND PNERNTIVYKLDV CKKG PR T
Sbjct: 124 AHRLGLIPLNADPRLFEYLSENDAPNERNTIVYKLDVSCKKGSPRVT 170
>gb|OAY65858.1| DNA-directed RNA polymerases I and III subunit rpac1 [Ananas
comosus]
Length = 328
Score = 282 bits (721), Expect = 3e-91
Identities = 136/167 (81%), Positives = 153/167 (91%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
KVSALDM DVP G+LPEHLELQRTRVVCK+DAPIHTEG+ YSGAYA+MGVDNSL++D+FC
Sbjct: 5 KVSALDMEDVPKGKLPEHLELQRTRVVCKADAPIHTEGIQYSGAYASMGVDNSLRMDNFC 64
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
+NFK+ + LTEDEMEFDMIGIDA++ANAFRRILIAEVPTMAIEKV + +NTSVIADEVL
Sbjct: 65 KNFKIEIKWLTEDEMEFDMIGIDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVL 124
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIPL ADPR F+YLSENDVPNERNTIVY+L + CKKG PR T
Sbjct: 125 AHRLGLIPLDADPRQFEYLSENDVPNERNTIVYELKISCKKGSPRLT 171
>gb|OAY71289.1| DNA-directed RNA polymerases I and III subunit rpac1 [Ananas
comosus]
Length = 326
Score = 281 bits (718), Expect = 9e-91
Identities = 136/167 (81%), Positives = 152/167 (91%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
KVSALDM DVP G+LPEHLELQRTRVVCK DAPIHTEG+ YSGAYA+MGVDNSL++D+FC
Sbjct: 3 KVSALDMEDVPKGKLPEHLELQRTRVVCKGDAPIHTEGIQYSGAYASMGVDNSLRMDNFC 62
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
+NFK+ + LTEDEMEFDMIGIDA++ANAFRRILIAEVPTMAIEKV + +NTSVIADEVL
Sbjct: 63 KNFKIEIKRLTEDEMEFDMIGIDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVL 122
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIPL ADPR F+YLSENDVPNERNTIVY+L + CKKG PR T
Sbjct: 123 AHRLGLIPLDADPRQFEYLSENDVPNERNTIVYELKLSCKKGSPRLT 169
>ref|XP_020103492.1| DNA-directed RNA polymerases I and III subunit rpac1-like isoform
X2 [Ananas comosus]
Length = 364
Score = 282 bits (721), Expect = 1e-90
Identities = 136/167 (81%), Positives = 153/167 (91%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
KVSALDM DVP G+LPEHLELQRTRVVCK+DAPIHTEG+ YSGAYA+MGVDNSL++D+FC
Sbjct: 3 KVSALDMEDVPKGKLPEHLELQRTRVVCKADAPIHTEGIQYSGAYASMGVDNSLRMDNFC 62
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
+NFK+ + LTEDEMEFDMIGIDA++ANAFRRILIAEVPTMAIEKV + +NTSVIADEVL
Sbjct: 63 KNFKIEIKWLTEDEMEFDMIGIDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVL 122
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIPL ADPR F+YLSENDVPNERNTIVY+L + CKKG PR T
Sbjct: 123 AHRLGLIPLDADPRQFEYLSENDVPNERNTIVYELKISCKKGSPRLT 169
>gb|OAY76273.1| DNA-directed RNA polymerases I and III subunit rpac1 [Ananas
comosus]
Length = 364
Score = 282 bits (721), Expect = 1e-90
Identities = 137/167 (82%), Positives = 152/167 (91%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
KVSALDM DVP G+LPEHLELQRTRVVCK DAPIHTEG+ YSGAYA+MGVDNSL++D+FC
Sbjct: 3 KVSALDMEDVPKGKLPEHLELQRTRVVCKGDAPIHTEGIQYSGAYASMGVDNSLRMDNFC 62
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
+NFK+ + LTEDEMEFDMIGIDA++ANAFRRILIAEVPTMAIEKV + +NTSVIADEVL
Sbjct: 63 KNFKIEIKRLTEDEMEFDMIGIDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVL 122
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIPL ADPR F+YLSENDVPNERNTIVY+L V CKKG PR T
Sbjct: 123 AHRLGLIPLDADPRQFEYLSENDVPNERNTIVYELKVSCKKGSPRLT 169
>ref|XP_020103490.1| DNA-directed RNA polymerases I and III subunit rpac1-like isoform
X1 [Ananas comosus]
ref|XP_020103491.1| DNA-directed RNA polymerases I and III subunit rpac1-like isoform
X1 [Ananas comosus]
Length = 366
Score = 282 bits (721), Expect = 1e-90
Identities = 136/167 (81%), Positives = 153/167 (91%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
KVSALDM DVP G+LPEHLELQRTRVVCK+DAPIHTEG+ YSGAYA+MGVDNSL++D+FC
Sbjct: 5 KVSALDMEDVPKGKLPEHLELQRTRVVCKADAPIHTEGIQYSGAYASMGVDNSLRMDNFC 64
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
+NFK+ + LTEDEMEFDMIGIDA++ANAFRRILIAEVPTMAIEKV + +NTSVIADEVL
Sbjct: 65 KNFKIEIKWLTEDEMEFDMIGIDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVL 124
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIPL ADPR F+YLSENDVPNERNTIVY+L + CKKG PR T
Sbjct: 125 AHRLGLIPLDADPRQFEYLSENDVPNERNTIVYELKISCKKGSPRLT 171
>ref|XP_009407931.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
rpac1-like [Musa acuminata subsp. malaccensis]
Length = 370
Score = 282 bits (721), Expect = 1e-90
Identities = 138/172 (80%), Positives = 152/172 (88%)
Frame = +2
Query: 47 MGKKEKVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQ 226
M KVSALDMPDVP GQLPEHL LQRTRVVCK+DAPIHTEG+ YSGAYA++GVDNSL
Sbjct: 1 MSSSTKVSALDMPDVPMGQLPEHLHLQRTRVVCKADAPIHTEGIQYSGAYASIGVDNSLG 60
Query: 227 LDSFCENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVI 406
+ FC+NFK V LTEDE+EFDM+GIDA+LANAFRRILIAEVP+MAIEKVL+ NNTSVI
Sbjct: 61 PNKFCKNFKTEVVRLTEDEIEFDMVGIDASLANAFRRILIAEVPSMAIEKVLMVNNTSVI 120
Query: 407 ADEVLAHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
ADEVLAHRLGL+PL ADPRLF+YLSEND PNERNTIVYK+DV CKKGG R T
Sbjct: 121 ADEVLAHRLGLVPLNADPRLFEYLSENDTPNERNTIVYKMDVSCKKGGSRVT 172
>ref|XP_020103496.1| DNA-directed RNA polymerases I and III subunit rpac1-like isoform
X1 [Ananas comosus]
Length = 364
Score = 281 bits (718), Expect = 3e-90
Identities = 136/167 (81%), Positives = 152/167 (91%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
KVSALDM DVP G+LPEHLELQRTRVVCK DAPIHTEG+ YSGAYA+MGVDNSL++D+FC
Sbjct: 3 KVSALDMEDVPKGKLPEHLELQRTRVVCKGDAPIHTEGIQYSGAYASMGVDNSLRMDNFC 62
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
+NFK+ + LTEDEMEFDMIGIDA++ANAFRRILIAEVPTMAIEKV + +NTSVIADEVL
Sbjct: 63 KNFKIEIKRLTEDEMEFDMIGIDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVL 122
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIPL ADPR F+YLSENDVPNERNTIVY+L + CKKG PR T
Sbjct: 123 AHRLGLIPLDADPRQFEYLSENDVPNERNTIVYELKLSCKKGSPRLT 169
>ref|XP_020103493.1| DNA-directed RNA polymerases I and III subunit rpac1-like isoform
X3 [Ananas comosus]
Length = 356
Score = 271 bits (694), Expect = 1e-86
Identities = 130/161 (80%), Positives = 147/161 (91%)
Frame = +2
Query: 80 MPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFCENFKVV 259
M DVP G+LPEHLELQRTRVVCK+DAPIHTEG+ YSGAYA+MGVDNSL++D+FC+NFK+
Sbjct: 1 MEDVPKGKLPEHLELQRTRVVCKADAPIHTEGIQYSGAYASMGVDNSLRMDNFCKNFKIE 60
Query: 260 VNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVLAHRLGL 439
+ LTEDEMEFDMIGIDA++ANAFRRILIAEVPTMAIEKV + +NTSVIADEVLAHRLGL
Sbjct: 61 IKWLTEDEMEFDMIGIDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVLAHRLGL 120
Query: 440 IPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
IPL ADPR F+YLSENDVPNERNTIVY+L + CKKG PR T
Sbjct: 121 IPLDADPRQFEYLSENDVPNERNTIVYELKISCKKGSPRLT 161
>ref|XP_020103497.1| DNA-directed RNA polymerases I and III subunit rpac1-like isoform
X2 [Ananas comosus]
Length = 356
Score = 270 bits (691), Expect = 3e-86
Identities = 130/161 (80%), Positives = 146/161 (90%)
Frame = +2
Query: 80 MPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFCENFKVV 259
M DVP G+LPEHLELQRTRVVCK DAPIHTEG+ YSGAYA+MGVDNSL++D+FC+NFK+
Sbjct: 1 MEDVPKGKLPEHLELQRTRVVCKGDAPIHTEGIQYSGAYASMGVDNSLRMDNFCKNFKIE 60
Query: 260 VNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVLAHRLGL 439
+ LTEDEMEFDMIGIDA++ANAFRRILIAEVPTMAIEKV + +NTSVIADEVLAHRLGL
Sbjct: 61 IKRLTEDEMEFDMIGIDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVLAHRLGL 120
Query: 440 IPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
IPL ADPR F+YLSENDVPNERNTIVY+L + CKKG PR T
Sbjct: 121 IPLDADPRQFEYLSENDVPNERNTIVYELKLSCKKGSPRLT 161
>ref|XP_021288216.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Herrania
umbratica]
Length = 383
Score = 268 bits (684), Expect = 7e-85
Identities = 129/170 (75%), Positives = 148/170 (87%)
Frame = +2
Query: 53 KKEKVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLD 232
+K+K S D+PDVP GQLP HLELQRTRV+C DAPIHTE V YSGAYA+MGVDNSL+LD
Sbjct: 11 EKKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRLD 70
Query: 233 SFCENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIAD 412
FC NF+V V LTE++MEFDMIGIDAA+ANAFRRILIAE+PTMAIEKVL+ANNTSV+ D
Sbjct: 71 HFCNNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQD 130
Query: 413 EVLAHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
EVLAHRLGLIP+ DPRLF+Y+SEND PNE+NTIV+KL V CK+G PR T
Sbjct: 131 EVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVRCKRGSPRIT 180
>ref|XP_007020444.2| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
isoform X1 [Theobroma cacao]
Length = 383
Score = 267 bits (683), Expect = 1e-84
Identities = 129/170 (75%), Positives = 148/170 (87%)
Frame = +2
Query: 53 KKEKVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLD 232
+K+K S D+PDVP GQLP HLELQRTRV+C DAPIHTE V YSGAYA+MGVDNSL+LD
Sbjct: 11 EKKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRLD 70
Query: 233 SFCENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIAD 412
FC NF+V V LTE++MEFDMIGIDAA+ANAFRRILIAE+PTMAIEKVL+ANNTSV+ D
Sbjct: 71 HFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQD 130
Query: 413 EVLAHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
EVLAHRLGLIP+ DPRLF+Y+SEND PNE+NTIV+KL V CK+G PR T
Sbjct: 131 EVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRIT 180
>gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
Length = 383
Score = 267 bits (683), Expect = 1e-84
Identities = 129/170 (75%), Positives = 148/170 (87%)
Frame = +2
Query: 53 KKEKVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLD 232
+K+K S D+PDVP GQLP HLELQRTRV+C DAPIHTE V YSGAYA+MGVDNSL+LD
Sbjct: 11 EKKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRLD 70
Query: 233 SFCENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIAD 412
FC NF+V V LTE++MEFDMIGIDAA+ANAFRRILIAE+PTMAIEKVL+ANNTSV+ D
Sbjct: 71 HFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQD 130
Query: 413 EVLAHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
EVLAHRLGLIP+ DPRLF+Y+SEND PNE+NTIV+KL V CK+G PR T
Sbjct: 131 EVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRIT 180
>ref|XP_010248372.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
isoform X2 [Nelumbo nucifera]
Length = 345
Score = 264 bits (674), Expect = 7e-84
Identities = 127/167 (76%), Positives = 146/167 (87%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
+VSALD+PDVP G LP HLELQRTRV+C SDAP HTE + YSGAYA++GVDNSL+LD FC
Sbjct: 3 RVSALDLPDVPKGHLPPHLELQRTRVLCASDAPTHTETIQYSGAYASVGVDNSLRLDQFC 62
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
+F+V V LTED+MEFDM+GID +LANAFRRILIAEVPTMAIEKVL+ANNTSV+ DEVL
Sbjct: 63 RDFRVEVIRLTEDDMEFDMVGIDPSLANAFRRILIAEVPTMAIEKVLIANNTSVVQDEVL 122
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIP+K DPRLF+Y+SEND PNE+NTIV+KL V CK GPR T
Sbjct: 123 AHRLGLIPIKVDPRLFEYMSENDTPNEKNTIVFKLHVKCKIKGPRLT 169
>ref|XP_010248371.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
isoform X1 [Nelumbo nucifera]
Length = 372
Score = 264 bits (674), Expect = 2e-83
Identities = 127/167 (76%), Positives = 146/167 (87%)
Frame = +2
Query: 62 KVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFC 241
+VSALD+PDVP G LP HLELQRTRV+C SDAP HTE + YSGAYA++GVDNSL+LD FC
Sbjct: 3 RVSALDLPDVPKGHLPPHLELQRTRVLCASDAPTHTETIQYSGAYASVGVDNSLRLDQFC 62
Query: 242 ENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVL 421
+F+V V LTED+MEFDM+GID +LANAFRRILIAEVPTMAIEKVL+ANNTSV+ DEVL
Sbjct: 63 RDFRVEVIRLTEDDMEFDMVGIDPSLANAFRRILIAEVPTMAIEKVLIANNTSVVQDEVL 122
Query: 422 AHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKGGPRCT 562
AHRLGLIP+K DPRLF+Y+SEND PNE+NTIV+KL V CK GPR T
Sbjct: 123 AHRLGLIPIKVDPRLFEYMSENDTPNEKNTIVFKLHVKCKIKGPRLT 169
>gb|PKA45703.1| DNA-directed RNA polymerase II subunit RPB3-A [Apostasia
shenzhenica]
Length = 368
Score = 263 bits (671), Expect = 4e-83
Identities = 128/166 (77%), Positives = 148/166 (89%), Gaps = 1/166 (0%)
Frame = +2
Query: 68 SALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYSGAYAAMGVDNSLQLDSFCEN 247
SALDMPDVP G LPEHL+LQRTRV CK+DAPI TEGV YSGAYAAMGVDNSL LD FC +
Sbjct: 5 SALDMPDVPQGVLPEHLKLQRTRVFCKADAPILTEGVEYSGAYAAMGVDNSLHLDDFCRD 64
Query: 248 FKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMAIEKVLVANNTSVIADEVLAH 427
FKV + +T+D++EFD++G+DA++ANAFRRILIAEVPTMAIEKVL+ NNTSVIADEVL+H
Sbjct: 65 FKVEIKRVTKDDIEFDLVGVDASMANAFRRILIAEVPTMAIEKVLIVNNTSVIADEVLSH 124
Query: 428 RLGLIPLKADPRLFDYLS-ENDVPNERNTIVYKLDVLCKKGGPRCT 562
RLGL+P+ ADPRLFDYLS END NE+NTIV+KL+V CKKGGPR T
Sbjct: 125 RLGLLPIDADPRLFDYLSAENDTSNEQNTIVFKLNVHCKKGGPRLT 170
>ref|XP_012456188.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
rpac1-like [Gossypium raimondii]
Length = 209
Score = 257 bits (656), Expect = 5e-83
Identities = 126/186 (67%), Positives = 150/186 (80%), Gaps = 1/186 (0%)
Frame = +2
Query: 11 HLCYFTCIYLVEMGK-KEKVSALDMPDVPTGQLPEHLELQRTRVVCKSDAPIHTEGVHYS 187
H + + +Y+ G+ K+K S D+PDVP GQLP HLELQR+RV C DAPIHTE + YS
Sbjct: 20 HKRFSSAVYIEGAGEEKKKFSIWDLPDVPMGQLPPHLELQRSRVSCNKDAPIHTESIQYS 79
Query: 188 GAYAAMGVDNSLQLDSFCENFKVVVNMLTEDEMEFDMIGIDAALANAFRRILIAEVPTMA 367
GAYA+MG+DNS +LD F NF+V V L ED+MEFDMI IDAA+AN+FRRILIAE+PTMA
Sbjct: 80 GAYASMGIDNSSRLDRFSNNFRVEVVRLNEDDMEFDMIVIDAAIANSFRRILIAELPTMA 139
Query: 368 IEKVLVANNTSVIADEVLAHRLGLIPLKADPRLFDYLSENDVPNERNTIVYKLDVLCKKG 547
IEKVL+AN TS+I DEVLAHRLGL+P++ DPRLFDYLSEND PNE+NTIV KL V CK+G
Sbjct: 140 IEKVLIANKTSIIQDEVLAHRLGLVPIRVDPRLFDYLSENDQPNEKNTIVSKLHVQCKRG 199
Query: 548 GPRCTG 565
PR TG
Sbjct: 200 SPRITG 205