BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00023380
         (3500 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002644180.1| Hypothetical protein CBG17156 [Caenorhabditi...    65   4e-07

>ref|XP_002644180.1| Hypothetical protein CBG17156 [Caenorhabditis briggsae]
 emb|CAP34960.1| Protein CBG17156 [Caenorhabditis briggsae]
          Length = 376

 Score = 65.1 bits (157), Expect = 4e-07
 Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
 Frame = +2

Query: 2942 KKPTRNK*RIATLKNRRKKYISINYYNRGYKSSGKLIEDRNLLKLKQEQLYNKKRKDKRH 3121
            KK +R K      KN++KK       NR  K+  K  + +   K K+ Q   KK+K+++ 
Sbjct: 13   KKKSRKK---KNQKNQKKKKNQKKKKNRKKKNRNKKNQKKKNQKKKKNQKNQKKKKNRKK 69

Query: 3122 RKSTTQ---DTAHKKQRQPKSITNEANEPNNLKITAPETQIQQISKRNKDQNLI*LKNNH 3292
            +K+  +       K Q+  K+  N+ N+ N  K    + Q  Q  K+N+ +     K N 
Sbjct: 70   KKNQKKKKNQKNQKNQKNQKNQKNQKNQKNQKKKKKKKNQKNQKKKKNQKKKKNRKKKNQ 129

Query: 3293 XXXXXXXXXXXXKISQTMKQPHNRRTTTDPTKLQDKNQKEKQNREETRKHDNQKEKKEEK 3472
                        K +Q   Q + +       K Q KNQK+K+N++  +K  NQK+KK  K
Sbjct: 130  KKKNQKKKNQKKKKNQKKNQKNQKN-----QKNQKKNQKKKKNQKNQKKKKNQKKKKNRK 184



 Score = 61.6 bits (148), Expect = 5e-06
 Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
 Frame = +2

Query: 2888 RDQTDR*TETRNIHNKRGKK-PTRNK*RIATLKNRRKKYISINYYNRGYKSSGKLIEDRN 3064
            ++Q  +  + +N  N++ +K   +N+ +    KN++KK       NR  K+  K  + + 
Sbjct: 137  KNQKKKKNQKKNQKNQKNQKNQKKNQKKKKNQKNQKKKKNQKKKKNRKKKNQKKKNQKKK 196

Query: 3065 LLKLKQEQLYNKKRKDKRHRKSTTQDTAHKKQRQPKSITNEANEPNNLKITAPETQIQQI 3244
              K K+ Q   KK+K+++++K+       K Q+  K+  N+ N+ N  K    + + Q+ 
Sbjct: 197  NQKKKKNQ--KKKKKNQKNQKNQKNQKNQKNQKNQKNQKNQKNQKNQKK-NQKKKKNQKK 253

Query: 3245 SKRNKDQNLI*LKNNHXXXXXXXXXXXXKISQTMKQPHNRRTTTDPTKLQ--DKNQKEKQ 3418
             K  K+Q     K N             K +Q  K    ++      K Q   KNQK ++
Sbjct: 254  KKNQKNQKNQKKKKNQKKKKNRKKKNQKKKNQKKKNQKKKKNQKKKKKNQKNQKNQKNQK 313

Query: 3419 NREETRKHDNQKEKKEEK 3472
            N++  +   NQK+KK  K
Sbjct: 314  NQKNQKNQKNQKKKKNRK 331