BLASTX nr result

ID: Ophiopogon26_contig00023351 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00023351
         (981 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC54551.1| gag-pol fusion protein [Rhizophagus irregularis ...   328   e-107
gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposo...   333   e-105
gb|KYP77961.1| Copia protein [Cajanus cajan]                          329   e-104
gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposo...   331   e-104
gb|KYP35263.1| Retrovirus-related Pol polyprotein from transposo...   325   e-104
emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]   332   e-103
gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposo...   333   e-103
gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposo...   333   e-103
ref|XP_011656225.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...   328   e-102
gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposo...   331   e-102
gb|PKU70142.1| Retrovirus-related Pol polyprotein from transposo...   315   e-101
gb|KYP32032.1| Copia protein [Cajanus cajan]                          328   e-101
gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposo...   334   e-101
dbj|GAV75669.1| RVT_2 domain-containing protein [Cephalotus foll...   321   e-100
gb|PKU66353.1| Retrovirus-related Pol polyprotein from transposo...   311   e-100
gb|PKU71791.1| Retrovirus-related Pol polyprotein from transposo...   318   e-100
gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposo...   332   e-100
gb|PKU73177.1| Retrovirus-related Pol polyprotein from transposo...   317   e-100
gb|KYP33441.1| Retrovirus-related Pol polyprotein from transposo...   330   1e-99
gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposo...   331   1e-99

>dbj|GBC54551.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 181602]
          Length = 429

 Score =  328 bits (840), Expect = e-107
 Identities = 153/292 (52%), Positives = 208/292 (71%)
 Frame = -2

Query: 908 DCTNDTNDLPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDAL 729
           + T+    LPP  K  +DHP +L+IGD +  V+TR     EC + AFLSQ EPK I DAL
Sbjct: 18  EATSSRQSLPPQRKWTRDHPFELIIGDANASVQTRRATQDECLYSAFLSQDEPKVIEDAL 77

Query: 728 NDEFWVYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQ 549
            D  WV AM +EL  FERNNVW LVP+PKN +I+GT+W+FRNKVDENG++TRNKARLVA+
Sbjct: 78  KDADWVLAMQEELNQFERNNVWKLVPKPKNRTIVGTRWVFRNKVDENGVVTRNKARLVAK 137

Query: 548 GYSQEEGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQP 369
           GYSQ EGIDFDETFAPVAR+EAIR+ LA+A++ NF+++QMDVKSAFLNG + EEV+V QP
Sbjct: 138 GYSQSEGIDFDETFAPVARLEAIRIFLAYAAHANFKVYQMDVKSAFLNGELEEEVYVSQP 197

Query: 368 PGFENVDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYTKFDNDVG 189
           PGFE+ +FP+YV+ L KALYGLKQAP+ W+D     L+ N +     DK ++ +  N   
Sbjct: 198 PGFEDPEFPEYVYFLLKALYGLKQAPRAWYDTLSQFLLDNHFSRGTVDKTLFYRNVNGAF 257

Query: 188 VIICLYVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSD 33
           +++ +YVDD++   T+ ++       + S ++M  MGE    LG+++ +  +
Sbjct: 258 ILVQIYVDDIIFGSTDEKLCKKFAKLMQSQYEMSMMGELTYFLGLQVKQVKE 309


>gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 749

 Score =  333 bits (854), Expect = e-105
 Identities = 162/294 (55%), Positives = 213/294 (72%), Gaps = 1/294 (0%)
 Frame = -2

Query: 884  LPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFWVYA 705
            LP  WKT +D   D +IG++ KGV TRS   + C+ +AF+SQ EPK+I++AL DE W+ A
Sbjct: 196  LPKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMA 255

Query: 704  MHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQEEGI 525
            M +EL  FERN VWDLVP PK+  IIGTKW+FRNK+DE+GII RNKARLVA+GY+QEEGI
Sbjct: 256  MQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGI 315

Query: 524  DFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFENVDF 345
            D+DETFAPVAR+EAIR+LLA++S KNF+L+QMDVKSAFLNG+I EEV+VEQPPGF +   
Sbjct: 316  DYDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKN 375

Query: 344  PDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYT-KFDNDVGVIICLYV 168
            P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++  KF ND  + + +YV
Sbjct: 376  PNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDT-MYVQIYV 434

Query: 167  DDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHY 6
            DD++   TN  +  +    +   F+M  MGE    LG++I +  D I +SQ  Y
Sbjct: 435  DDIVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGIFISQSKY 488


>gb|KYP77961.1| Copia protein [Cajanus cajan]
          Length = 656

 Score =  329 bits (843), Expect = e-104
 Identities = 162/301 (53%), Positives = 216/301 (71%), Gaps = 2/301 (0%)
 Frame = -2

Query: 902 TNDTND-LPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALN 726
           T +T++ LP  WKT +D   D +IG++ KGV TRS   + C+ +AF+SQ EPK+I++AL 
Sbjct: 96  TKETSEQLPKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALK 155

Query: 725 DEFWVYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQG 546
           DE W+ AM +EL  FERN VWDLVP PK+  IIGTKW+FRNK+DE+GII RNKARLVA+G
Sbjct: 156 DEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKG 215

Query: 545 YSQEEGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPP 366
           Y+QEEGID+DETFAPVAR+EAIR+LLA++S KNF+L+QMDVKS FLNG+I EEV+VEQP 
Sbjct: 216 YNQEEGIDYDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSVFLNGLIQEEVYVEQPL 275

Query: 365 GFENVDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYT-KFDNDVG 189
           GF +   P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++  KF ND  
Sbjct: 276 GFVDFKNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDT- 334

Query: 188 VIICLYVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEH 9
           + + +YVDD++   TN  +  +    +   F+M  MGE    LG++I +  D I +SQ  
Sbjct: 335 MYVQIYVDDIVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGIFISQSK 394

Query: 8   Y 6
           Y
Sbjct: 395 Y 395


>gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 772

 Score =  331 bits (849), Expect = e-104
 Identities = 160/294 (54%), Positives = 214/294 (72%), Gaps = 1/294 (0%)
 Frame = -2

Query: 884  LPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFWVYA 705
            LP  W+T +D   D +IG++ KGV TRS   + C+ +AF+SQ EPK+I++AL DE W+ A
Sbjct: 457  LPKEWRTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMA 516

Query: 704  MHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQEEGI 525
            M +EL  FERN VWDLVP PK+  IIGTKW+FRNK+DE+GII RNKARLVA+GY+QEEGI
Sbjct: 517  MQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGI 576

Query: 524  DFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFENVDF 345
            D+DETFAPVAR+EAIR+LLA++S KNF+L+QMDVKSAFLNG+I EEV+VEQPPGF +   
Sbjct: 577  DYDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKN 636

Query: 344  PDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYT-KFDNDVGVIICLYV 168
            P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++  KF ND  + + +YV
Sbjct: 637  PNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDT-MYVQIYV 695

Query: 167  DDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHY 6
            DD++   TN  +  +    +   F+M  MGE    LG++I + ++ I +SQ  Y
Sbjct: 696  DDIVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMNEGIFISQSKY 749


>gb|KYP35263.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 570

 Score =  325 bits (832), Expect = e-104
 Identities = 161/301 (53%), Positives = 216/301 (71%), Gaps = 2/301 (0%)
 Frame = -2

Query: 902  TNDTND-LPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALN 726
            T +T++ LP  WKT +D   D +IG++ KGV TRS   + C+ +AF+SQ EPK+I++AL 
Sbjct: 204  TKETSEQLPKEWKTSRDLSIDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALK 263

Query: 725  DEFWVYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQG 546
            DE W+ AM +EL  FERN VWDLVP PK+  IIGTKW+FRNK+DE+GII RNKARLVA+G
Sbjct: 264  DEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIIIRNKARLVAKG 323

Query: 545  YSQEEGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPP 366
            Y+QEEGID+DETFAPVAR+EAIR+LLA++S  NF+L+QMDVKSAFLNG+I EEV+VEQPP
Sbjct: 324  YNQEEGIDYDETFAPVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPP 383

Query: 365  GFENVDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYT-KFDNDVG 189
            GF +   P++V+KL KAL  LKQAP+ W+D+    L+ N Y     D  ++  KF ND  
Sbjct: 384  GFVDFKNPNHVYKLKKALCDLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKND-K 442

Query: 188  VIICLYVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEH 9
            + + ++VDD++   TN  +  +    + S F+M  MGE    LG++I +  D I +SQ  
Sbjct: 443  MYVQIHVDDIVFGSTNTSLCKEFAKTMQSEFEMSMMGELTFFLGLQIKQMHDGIFISQSK 502

Query: 8    Y 6
            Y
Sbjct: 503  Y 503


>emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]
          Length = 898

 Score =  332 bits (851), Expect = e-103
 Identities = 158/297 (53%), Positives = 212/297 (71%)
 Frame = -2

Query: 893  TNDLPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFW 714
            + DLP  WK V +HP D +IG+   GV+TRS   + C+ LAF+ Q EPKNI DA+ DE W
Sbjct: 577  SQDLPKDWKFVINHPQDQIIGNPXSGVRTRSSLRNICNNLAFIXQIEPKNIKDAIVDENW 636

Query: 713  VYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQE 534
            + AM +EL  FER+ VW+LVPRP N S+IGTKW+FRNK+DENGII RNKARLVAQGY+QE
Sbjct: 637  MIAMQEELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQE 696

Query: 533  EGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFEN 354
              ID++ETFAPVAR+EAIRMLLAFA +K+F L+QMDVKS FLNG INEEV+ EQPPGF++
Sbjct: 697  XXIDYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSXFLNGFINEEVYXEQPPGFQS 756

Query: 353  VDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYTKFDNDVGVIICL 174
             +FP++VFKL KALYGLKQAP+ W+++    L   G+ +   D  ++ K      +++ +
Sbjct: 757  FNFPNHVFKLKKALYGLKQAPRAWYERLSKFLXKKGFKMGKIDTTLFIKTKEKDMLLVQI 816

Query: 173  YVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHYV 3
            YVDD++   TN  +  D    + S F+M  MGE +  LG++I +  +   ++Q  Y+
Sbjct: 817  YVDDIIFGATNBSLCEDFSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYI 873


>gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1010

 Score =  333 bits (855), Expect = e-103
 Identities = 162/297 (54%), Positives = 214/297 (72%), Gaps = 1/297 (0%)
 Frame = -2

Query: 893  TNDLPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFW 714
            +  LP  WKT KD   + +IG++ KGV TR    + C+ +AF+SQ EPK I++AL+DE W
Sbjct: 454  SEQLPKEWKTSKDLSIENIIGNIGKGVSTRRSIKNICNTMAFVSQVEPKTIDEALHDEHW 513

Query: 713  VYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQE 534
            + AM +EL  FERN VWDLVP P +  IIGTKW+FRNK+DE+GII RNKARLVA+GY+QE
Sbjct: 514  LMAMQEELNQFERNEVWDLVPLPSDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQE 573

Query: 533  EGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFEN 354
            EGID+DETFAPVAR+EAIR+LLA+AS  NF+L+QMDVKSAFLNG+I EEV+VEQPPGF +
Sbjct: 574  EGIDYDETFAPVARIEAIRLLLAYASIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVD 633

Query: 353  VDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYT-KFDNDVGVIIC 177
              +P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++  KF ND  + + 
Sbjct: 634  FKYPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYVRGKVDNTLFVKKFKNDT-MYVQ 692

Query: 176  LYVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHY 6
            +YVDD++   TNL +  +    +   F+M  MGE    LG++I + SD I +SQ  Y
Sbjct: 693  IYVDDIVFGSTNLSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMSDGIFISQSKY 749


>gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1006

 Score =  333 bits (854), Expect = e-103
 Identities = 162/294 (55%), Positives = 212/294 (72%), Gaps = 1/294 (0%)
 Frame = -2

Query: 884  LPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFWVYA 705
            LP  WK  +D   D +IG++ KGV TRS   + C+ +AF+SQ EPKNI++AL DE W+ A
Sbjct: 453  LPKEWKASRDLSMDNIIGNIGKGVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMA 512

Query: 704  MHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQEEGI 525
            M +EL  FERN VWDLVP PK+  IIGTKW+FRNK+DE+GII RNKARLVA+GY+QEEGI
Sbjct: 513  MQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGI 572

Query: 524  DFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFENVDF 345
            D+DETFAPVAR+EAIR+LLA++S KNF+L+QMDVKSAFLNG+I EEV+VEQPPGFE+   
Sbjct: 573  DYDETFAPVARIEAIRLLLAYSSLKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFEDFKN 632

Query: 344  PDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYTK-FDNDVGVIICLYV 168
            P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++ K F ND  + + +YV
Sbjct: 633  PNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKRFKNDT-MYVQIYV 691

Query: 167  DDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHY 6
            DD++   TN  +  +    +   F+M  MGE    LG++I +  D   +SQ  Y
Sbjct: 692  DDIVFGSTNSSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGTFISQSKY 745


>ref|XP_011656225.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
            from transposon TNT 1-94 [Cucumis sativus]
          Length = 794

 Score =  328 bits (840), Expect = e-102
 Identities = 161/296 (54%), Positives = 210/296 (70%)
 Frame = -2

Query: 893  TNDLPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFW 714
            ++ LP  W+    H  DL++ +  +GVKTRS +L+  S LAF+SQ EP++  DA  DEFW
Sbjct: 395  SSSLPKVWRYALSHLKDLILSNPEQGVKTRS-SLNLFSNLAFVSQIEPRSFKDAECDEFW 453

Query: 713  VYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQE 534
            + AM +EL  FERN VW LVPRP N SIIGTKW+FRNK+DENG I RNKARLVAQGY QE
Sbjct: 454  ILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQE 513

Query: 533  EGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFEN 354
            EGID++ETFAPVAR+EAIRMLLAFASYKNF L+QMDVKS FLNG I E+ +VEQP  FE+
Sbjct: 514  EGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSDFLNGYIVEKFYVEQPXAFES 573

Query: 353  VDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYTKFDNDVGVIICL 174
             D P++V+KL KALYGLKQAP+ W+D+    L+ N + +   D  ++ K  N+  +I+ +
Sbjct: 574  FDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQI 633

Query: 173  YVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHY 6
            YVDD++   TN  +  +    + + F+M  MGE    LG++I +  D I +SQE Y
Sbjct: 634  YVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKY 689


>gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 963

 Score =  331 bits (849), Expect = e-102
 Identities = 160/299 (53%), Positives = 214/299 (71%), Gaps = 1/299 (0%)
 Frame = -2

Query: 899  NDTNDLPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDE 720
            N +  LP  WKT +D   + +IG++ KGV TR    + C+ +AF+SQ EPK I++AL DE
Sbjct: 421  NTSEQLPKEWKTSRDLSMENIIGNIGKGVSTRRAIKNICNVMAFVSQVEPKTIDEALQDE 480

Query: 719  FWVYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYS 540
             W+ AM +EL  FERN VWDLVP P +  IIGTKW+FRNK+DE+GII RNKARLVA+GY+
Sbjct: 481  HWLMAMQEELNQFERNEVWDLVPLPTDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYN 540

Query: 539  QEEGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGF 360
            QEEGID+DETFAPVAR+EAIR+LLA++S  NF+L+QMDVKSAFLNG+I EEV+VEQPPGF
Sbjct: 541  QEEGIDYDETFAPVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGF 600

Query: 359  ENVDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYT-KFDNDVGVI 183
             +  +P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++  KF ND  + 
Sbjct: 601  VDFKYPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYVRGKVDNTLFVKKFKNDT-MY 659

Query: 182  ICLYVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHY 6
            + +YVDD++   TN+ +  +    +   F+M  MGE    LG++I + SD I +SQ  Y
Sbjct: 660  VQIYVDDIVFGSTNVSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMSDGIFISQSKY 718


>gb|PKU70142.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 455

 Score =  315 bits (807), Expect = e-101
 Identities = 152/300 (50%), Positives = 212/300 (70%), Gaps = 1/300 (0%)
 Frame = -2

Query: 899  NDTNDLPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDE 720
            N+  + P   +  K+HP +L+IG+ S+GV+TR     E +  AF+S  EP NI+ AL DE
Sbjct: 110  NENMEEPKVLRFSKNHPKELIIGEPSEGVRTRRGLNKEVNHSAFISTIEPTNIDQALLDE 169

Query: 719  FWVYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYS 540
            FW+ AM +EL  F RN VW+L  RPK+ S++GTKW+F+NK++++G++ RNKARLVA+GY+
Sbjct: 170  FWILAMQEELNQFVRNKVWELTTRPKDQSVVGTKWVFKNKMNDSGVVIRNKARLVAKGYN 229

Query: 539  QEEGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGF 360
            Q EGIDF+ETFAPVAR+EAIR+LLAFA +K F+LFQMDVKSAFLNGVI E+VFVEQPPGF
Sbjct: 230  QIEGIDFEETFAPVARLEAIRVLLAFACFKGFKLFQMDVKSAFLNGVIEEDVFVEQPPGF 289

Query: 359  ENVDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIY-TKFDNDVGVI 183
            EN  FP++VFKL KALYGLKQAP+ W+++  + L+   +     D  ++  K   D+ +I
Sbjct: 290  ENSKFPNHVFKLKKALYGLKQAPRAWYERLSTFLLERSFEKGSVDTTLFLRKIGKDI-LI 348

Query: 182  ICLYVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHYV 3
            + +YVDD++   +N    +D    +SS F+M  MG+ +  LG  I +  +   LSQ  Y+
Sbjct: 349  VQIYVDDIIFGSSNKHFCDDFSKTMSSEFEMSLMGDLNYFLGFSIKQLEEGTFLSQNKYI 408


>gb|KYP32032.1| Copia protein [Cajanus cajan]
          Length = 1027

 Score =  328 bits (841), Expect = e-101
 Identities = 159/299 (53%), Positives = 212/299 (70%), Gaps = 1/299 (0%)
 Frame = -2

Query: 899  NDTNDLPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDE 720
            N +  LP  WKT KD   + +IG++ K V TR    + C+ +AF+SQ EPK I++AL DE
Sbjct: 674  NTSEQLPKEWKTSKDLSMENIIGNIGKRVSTRRAIKNICNTMAFVSQVEPKTIDEALKDE 733

Query: 719  FWVYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYS 540
             W+ AM +EL  FERN  WDLVP P N  IIGTKW+FRNK+DE+GII RNKARLVA+GY+
Sbjct: 734  HWLMAMQEELNQFERNEAWDLVPLPTNYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYN 793

Query: 539  QEEGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGF 360
            QEEGID+DETFAPVAR+EAIR+LLA++S  NF+L+QMDVKSAFLNG+I EEV+VEQPPGF
Sbjct: 794  QEEGIDYDETFAPVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGF 853

Query: 359  ENVDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYT-KFDNDVGVI 183
             +  +P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++  KF ND  + 
Sbjct: 854  VDFKYPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYVRGKVDNTLFVKKFKNDT-MY 912

Query: 182  ICLYVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHY 6
            + +YVDD++   TN+ +  +    +   F+M  MGE    LG++I + SD I ++Q  Y
Sbjct: 913  VQIYVDDIVFGSTNVSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMSDGIFITQSKY 971


>gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1564

 Score =  334 bits (857), Expect = e-101
 Identities = 163/294 (55%), Positives = 212/294 (72%), Gaps = 1/294 (0%)
 Frame = -2

Query: 884  LPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFWVYA 705
            LP  WKT +D   D +IG++ KGV TRS   + C+ +AF+SQ EPKNI++AL DE W+ A
Sbjct: 1011 LPKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMA 1070

Query: 704  MHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQEEGI 525
            M +EL  FERN VWDLVP PK+  IIGTKW+FRNK+DE+GII RNKARLVA+GY+QEEGI
Sbjct: 1071 MQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGI 1130

Query: 524  DFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFENVDF 345
            D+DETFAPVAR+EAIR+LLA++S KNF+L+QMDVKSAFLNG I EEV+VEQPPGF +   
Sbjct: 1131 DYDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGFIQEEVYVEQPPGFVDYKN 1190

Query: 344  PDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYT-KFDNDVGVIICLYV 168
            P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++  KF ND  + + +YV
Sbjct: 1191 PNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDT-MYVQIYV 1249

Query: 167  DDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHY 6
            DD++   TN  +  +    +   F+M  MGE    LG++I +  D I +SQ  Y
Sbjct: 1250 DDIVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGIFISQSKY 1303


>dbj|GAV75669.1| RVT_2 domain-containing protein [Cephalotus follicularis]
          Length = 762

 Score =  321 bits (822), Expect = e-100
 Identities = 155/289 (53%), Positives = 212/289 (73%)
 Frame = -2

Query: 869 KTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFWVYAMHDEL 690
           K VK HP + +IGD  +G+ TRS   H  +++AFL Q EPKNI +A +D+ W+ AM +EL
Sbjct: 7   KVVKGHPHEAIIGDPRQGIVTRSSVNH--NYIAFLFQIEPKNIKEAESDDNWIIAMREEL 64

Query: 689 GNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQEEGIDFDET 510
             FERN VW+LVPRP N +IIGTKW+FRNK+D+ GII RNKARLVA+GYSQEEGIDFDE+
Sbjct: 65  NQFERNKVWNLVPRPSNHNIIGTKWVFRNKMDDQGIIVRNKARLVAKGYSQEEGIDFDES 124

Query: 509 FAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFENVDFPDYVF 330
           +APVAR+E+IR+LLA+AS+K+F L+ MDVKSAFLNG+I EEV+VEQPPGFEN  FP++VF
Sbjct: 125 YAPVARLESIRILLAYASFKDFILYPMDVKSAFLNGLIKEEVYVEQPPGFENPHFPNHVF 184

Query: 329 KLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYTKFDNDVGVIICLYVDDMLIF 150
           KL+KALYGLKQAP+  ++K    L+ N +        ++TK  ++  +I+ +YVDD++  
Sbjct: 185 KLSKALYGLKQAPRALYEKLSGYLLKNNFKRGSIHITLFTKSLHEDILIVQIYVDDIIFG 244

Query: 149 GTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHYV 3
            TN  +  D    +   F+M  MGE ++ LG+++ +  D I ++Q  YV
Sbjct: 245 STNESLCKDFAKIMQDEFEMSMMGELNLFLGLQVKQLKDGIFINQSKYV 293


>gb|PKU66353.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 452

 Score =  311 bits (798), Expect = e-100
 Identities = 146/286 (51%), Positives = 208/286 (72%)
 Frame = -2

Query: 860 KDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFWVYAMHDELGNF 681
           K+HP +L+IG+ S+GV+TR     E +  AF+S  EP NI+ AL+DEFW+ AM +EL  F
Sbjct: 115 KNHPRELIIGEPSEGVRTRRGLNKEVNHSAFISTIEPTNIDQALSDEFWILAMQEELNQF 174

Query: 680 ERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQEEGIDFDETFAP 501
            RN VW+L  RPK+ S++G KW+F+NK++++G++ RNKARLVA+GY+Q EGIDF+ETFAP
Sbjct: 175 VRNKVWELTTRPKDQSVVGIKWVFKNKMNDSGVVIRNKARLVAKGYNQIEGIDFEETFAP 234

Query: 500 VARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFENVDFPDYVFKLN 321
           VAR+EAIR+LLAFA +K+F+LFQMDVKSAFLNGVI E+V+VEQPPGFEN  +P++VFKL 
Sbjct: 235 VARLEAIRVLLAFACFKSFKLFQMDVKSAFLNGVIEEDVYVEQPPGFENSKYPNHVFKLK 294

Query: 320 KALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYTKFDNDVGVIICLYVDDMLIFGTN 141
           KALYGLKQAP+ W+++  + L+   +     D  ++ K      +I+ +YVDD++   +N
Sbjct: 295 KALYGLKQAPRAWYERLSTFLLERSFEKGSVDTTLFLKKFGKEILIVQIYVDDIIFGSSN 354

Query: 140 LEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHYV 3
             + +D  + +SS F+M  MG+ +  LG  I +  +   LSQ  Y+
Sbjct: 355 KNLCDDFSNTMSSEFEMSLMGDLNYFLGFSIKQLEEGTFLSQTKYI 400


>gb|PKU71791.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 667

 Score =  318 bits (814), Expect = e-100
 Identities = 152/300 (50%), Positives = 215/300 (71%), Gaps = 1/300 (0%)
 Frame = -2

Query: 899  NDTNDLPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDE 720
            N+  + P   +  K+HP +L+IG+ S+GV+TR     E +  AF+S  EP NI+ AL+DE
Sbjct: 110  NENMEEPKVLRFSKNHPKELIIGEPSEGVRTRRGLNKEVNHSAFISTVEPTNIDQALSDE 169

Query: 719  FWVYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYS 540
            FW+ AM +EL  F RN VW+L  RPK+ S++GTKW+F+NK++++G++ RNKARLVA+GY+
Sbjct: 170  FWILAMQEELNQFVRNKVWELTTRPKDQSVVGTKWVFKNKMNDSGVVIRNKARLVAKGYN 229

Query: 539  QEEGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGF 360
            Q EGIDF+ETFAPVAR+EAIR+LLAFA +K F+LFQMDVKSAFLNGVI E+VFVEQPPGF
Sbjct: 230  QIEGIDFEETFAPVARLEAIRVLLAFACFKGFKLFQMDVKSAFLNGVIEEDVFVEQPPGF 289

Query: 359  ENVDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIY-TKFDNDVGVI 183
            EN  FP++VFKL KALYGLKQAP+ W+++  + L+   +     D  ++  K   D+ +I
Sbjct: 290  ENSKFPNHVFKLKKALYGLKQAPRAWYERLSTFLLERSFEKGSVDTTLFLRKIGKDI-LI 348

Query: 182  ICLYVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHYV 3
            + +YVDD++   +N  + +D    +S+ F+M  MG+ +  LG  I +  + I LSQ  Y+
Sbjct: 349  VQIYVDDIIFGSSNKHLCDDFSKTMSNEFEMSLMGDLNYFLGFSIKQLEEGIFLSQTKYI 408


>gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1533

 Score =  332 bits (851), Expect = e-100
 Identities = 159/294 (54%), Positives = 212/294 (72%), Gaps = 1/294 (0%)
 Frame = -2

Query: 884  LPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFWVYA 705
            LP  WKT +D   D +IG + KGV TRS   + C+ +AF+SQ EPKNI++AL DE W+ A
Sbjct: 980  LPKEWKTTRDLSMDNIIGSIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMA 1039

Query: 704  MHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQEEGI 525
            M +EL  FERN VWDLVP PK+  IIGTKW+FRNK+DE+GII RNKARLVA+GY+QEEGI
Sbjct: 1040 MQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGI 1099

Query: 524  DFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFENVDF 345
            D+DETFAPVAR+EAIR+LLA+++ +NF+L+QMDVKSAFLNG+I EEV+VEQPPGF +   
Sbjct: 1100 DYDETFAPVARIEAIRLLLAYSTIRNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKN 1159

Query: 344  PDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYT-KFDNDVGVIICLYV 168
            P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++  KF ND  + + +YV
Sbjct: 1160 PNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDT-MYVQIYV 1218

Query: 167  DDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHY 6
            DD++   TN+ +  +    +   F+M  MGE    LG+++ +  D   +SQ  Y
Sbjct: 1219 DDIVFGSTNISLCKEFAKTMQGEFEMSMMGELTFFLGLQVKQMHDGTFISQSKY 1272


>gb|PKU73177.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
 gb|PKU77260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
 gb|PKU78447.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
 gb|PKU81819.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 661

 Score =  317 bits (811), Expect = e-100
 Identities = 151/298 (50%), Positives = 214/298 (71%)
 Frame = -2

Query: 896 DTNDLPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEF 717
           D +D+P      K HP +L++GD S+GV+TR     E S  AF+S  EP +I+ AL DEF
Sbjct: 108 DESDMP---SETKIHPKELILGDPSEGVRTRHGLRKEVSHSAFISMIEPTSIDQALGDEF 164

Query: 716 WVYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQ 537
           W+ AM +EL  F RN+VW+LV RPK  S++GTKW+F+NKV+++G I RNKARLVA+GY+Q
Sbjct: 165 WILAMQEELNQFTRNDVWELVKRPKEQSVVGTKWVFKNKVNDSGTIIRNKARLVAKGYNQ 224

Query: 536 EEGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFE 357
            EGIDF+ETFAPVAR+EAIR+LLAFA +KNF+L+QMDVKSAFLNGVI E+V+VEQPPGFE
Sbjct: 225 IEGIDFEETFAPVARLEAIRVLLAFACFKNFKLYQMDVKSAFLNGVIKEDVYVEQPPGFE 284

Query: 356 NVDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYTKFDNDVGVIIC 177
           +  FP++V+KL KALYGLKQAP+ W+++  S L++ G+     D  ++ +   +  +I+ 
Sbjct: 285 SSQFPNHVYKLKKALYGLKQAPRAWYERLSSFLLNRGFQKGSVDTTLFLQKVKEEILIVQ 344

Query: 176 LYVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHYV 3
           +YVDD+L   ++  + ++    +S+ F+M  MGE +  LG  + +  +   LSQ  Y+
Sbjct: 345 IYVDDILFGSSDKNLCDEFSKTMSNEFEMSMMGELNYFLGFSVKQMENGTFLSQSKYI 402


>gb|KYP33441.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1470

 Score =  330 bits (847), Expect = 1e-99
 Identities = 163/301 (54%), Positives = 217/301 (72%), Gaps = 2/301 (0%)
 Frame = -2

Query: 902  TNDTND-LPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALN 726
            T +T++ LP  WKT +D   D +IG++ KGV TRS   + C+ +AF+SQ EPK+I++AL 
Sbjct: 1004 TKETSEQLPKEWKTSRDLSIDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALK 1063

Query: 725  DEFWVYAMHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQG 546
            DE W+ AM +EL  FERN VWDLVP P +  IIGTKW+FRNK+DE+GII RNKARLVA+G
Sbjct: 1064 DEHWLMAMQEELNQFERNEVWDLVPLPTDYPIIGTKWVFRNKLDESGIIIRNKARLVAKG 1123

Query: 545  YSQEEGIDFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPP 366
            Y+QEEGID+DETFAPVAR+EAIR+LLA++S  NF+L+QMDVKSAFLNG+I EEV+VEQPP
Sbjct: 1124 YNQEEGIDYDETFAPVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPP 1183

Query: 365  GFENVDFPDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYT-KFDNDVG 189
            GF +   P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++  KF ND  
Sbjct: 1184 GFVDFKNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYVRGKVDNTLFVKKFKNDT- 1242

Query: 188  VIICLYVDDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEH 9
            + + +YVDD++   TN  +  +    +   F+M  MGE    LG++I + SD I +SQ  
Sbjct: 1243 MYVQIYVDDIVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMSDGIFISQSK 1302

Query: 8    Y 6
            Y
Sbjct: 1303 Y 1303


>gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1569

 Score =  331 bits (848), Expect = 1e-99
 Identities = 161/294 (54%), Positives = 212/294 (72%), Gaps = 1/294 (0%)
 Frame = -2

Query: 884  LPPAWKTVKDHPTDLVIGDVSKGVKTRSQALHECSFLAFLSQCEPKNINDALNDEFWVYA 705
            LP  WKT ++   D +IG++ KGV TRS   + C+ +AF+SQ EPKNI++AL DE W+ A
Sbjct: 1016 LPKEWKTSRELSIDNIIGNIGKGVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMA 1075

Query: 704  MHDELGNFERNNVWDLVPRPKNCSIIGTKWIFRNKVDENGIITRNKARLVAQGYSQEEGI 525
            M +EL  FERN VWDLVP PK+  IIGTKW+FRNK+DE+GII RNKARLVA+GY+QEEGI
Sbjct: 1076 MQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGI 1135

Query: 524  DFDETFAPVARMEAIRMLLAFASYKNFRLFQMDVKSAFLNGVINEEVFVEQPPGFENVDF 345
            D+DETFAPVAR+EAIR+LLA++S KNF+L+QMDVKSAFLNG+I EEV+VEQPPGF +   
Sbjct: 1136 DYDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKN 1195

Query: 344  PDYVFKLNKALYGLKQAPKQWHDKFDSVLVSNGYHINDADKCIYTK-FDNDVGVIICLYV 168
            P++V+KL KALYGLKQAP+ W+D+    L+ N Y     D  ++ K F ND  + + +YV
Sbjct: 1196 PNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKRFKNDT-MYVQIYV 1254

Query: 167  DDMLIFGTNLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCITLSQEHY 6
            DD++   TN  +  +    +   F+M  MGE    LG++I +  D   +SQ  Y
Sbjct: 1255 DDIVFGSTNSSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGTFISQSKY 1308


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