BLASTX nr result

ID: Ophiopogon26_contig00023117 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00023117
         (367 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256975.1| RING-H2 finger protein ATL2-like [Asparagus ...    86   8e-18
gb|ONK75144.1| uncharacterized protein A4U43_C03F13820 [Asparagu...    55   2e-06

>ref|XP_020256975.1| RING-H2 finger protein ATL2-like [Asparagus officinalis]
          Length = 286

 Score = 86.3 bits (212), Expect = 8e-18
 Identities = 57/124 (45%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
 Frame = -2

Query: 366 DMWFHSNNTCPLCRSLIETTSAEIPNEPLV--AGFEAGNSSKSLIGEGXXXXXXXXXXXX 193
           DMWFHSNNTCPLCRSL+E  + E   E  V   G  + N S                   
Sbjct: 132 DMWFHSNNTCPLCRSLVEAHANEKVVEIAVETQGENSVNKSNEEGSSSYMGSFPPPPSSS 191

Query: 192 XXXSKEGMLVIDIPTRIAEAFSSADTXXXXXXXXXXXXXXPTSRLLEEIKSPVFSRMESF 13
               KEGML+IDIP+R   AFSS++               PTSRLLEEIKSPV  RM+S 
Sbjct: 192 SRKRKEGMLMIDIPSRANGAFSSSNA-PLSSSRVPSDSPLPTSRLLEEIKSPVMGRMKSL 250

Query: 12  KRML 1
           KRML
Sbjct: 251 KRML 254


>gb|ONK75144.1| uncharacterized protein A4U43_C03F13820 [Asparagus officinalis]
          Length = 263

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 33/60 (55%), Positives = 38/60 (63%)
 Frame = -2

Query: 180 KEGMLVIDIPTRIAEAFSSADTXXXXXXXXXXXXXXPTSRLLEEIKSPVFSRMESFKRML 1
           KEGML+IDIP+R   AFSS++                TSRLLEEIKSPV  RM+S KRML
Sbjct: 173 KEGMLMIDIPSRANGAFSSSNAPLSSSRVPSDSPLP-TSRLLEEIKSPVMGRMKSLKRML 231


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