BLASTX nr result

ID: Ophiopogon26_contig00022807 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00022807
         (377 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagu...    71   1e-11
ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [...    71   1e-11

>gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagus officinalis]
          Length = 1222

 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 60/163 (36%), Positives = 73/163 (44%), Gaps = 41/163 (25%)
 Frame = -1

Query: 377  QGTSGISELIEAETT------DALERSEFPHDPHHVDPLDN----TISRGE-LDADMCTN 231
            Q  SG S+LIE E +      DA E+ E P +P  V P       T SR E    DM T 
Sbjct: 806  QVPSGTSKLIETEISKNAASIDAQEQLEAPINPQPVTPRPECPVPTDSRAEEKHHDMSTE 865

Query: 230  PEQNSLN----NSQELXXXXXXXXXXXXXN--------------------------ETSL 141
             +QNSLN    NS EL             +                          +TSL
Sbjct: 866  LDQNSLNKVYQNSHELAKVNNTTLNAGLPSIEGFTSAECASRYLVNNNVGPANANNDTSL 925

Query: 140  QGEDFSNAKGVSIIVEDMGVDIVNVANFDCPQDGSANIRVDEN 12
            Q +DFSN    SI VEDMGVDIVN+ N +CPQD  AN+  +E+
Sbjct: 926  QVDDFSNGNAASITVEDMGVDIVNITNAECPQDNPANMSKNED 968


>ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [Asparagus officinalis]
          Length = 1236

 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 60/163 (36%), Positives = 73/163 (44%), Gaps = 41/163 (25%)
 Frame = -1

Query: 377  QGTSGISELIEAETT------DALERSEFPHDPHHVDPLDN----TISRGE-LDADMCTN 231
            Q  SG S+LIE E +      DA E+ E P +P  V P       T SR E    DM T 
Sbjct: 820  QVPSGTSKLIETEISKNAASIDAQEQLEAPINPQPVTPRPECPVPTDSRAEEKHHDMSTE 879

Query: 230  PEQNSLN----NSQELXXXXXXXXXXXXXN--------------------------ETSL 141
             +QNSLN    NS EL             +                          +TSL
Sbjct: 880  LDQNSLNKVYQNSHELAKVNNTTLNAGLPSIEGFTSAECASRYLVNNNVGPANANNDTSL 939

Query: 140  QGEDFSNAKGVSIIVEDMGVDIVNVANFDCPQDGSANIRVDEN 12
            Q +DFSN    SI VEDMGVDIVN+ N +CPQD  AN+  +E+
Sbjct: 940  QVDDFSNGNAASITVEDMGVDIVNITNAECPQDNPANMSKNED 982


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