BLASTX nr result

ID: Ophiopogon26_contig00022759 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00022759
         (381 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020266362.1| LOW QUALITY PROTEIN: uncharacterized protein...    65   2e-09
ref|XP_020252987.1| uncharacterized protein LOC109830206 isoform...    56   8e-07
ref|XP_020252986.1| uncharacterized protein LOC109830206 isoform...    54   5e-06

>ref|XP_020266362.1| LOW QUALITY PROTEIN: uncharacterized protein LOC109841836
           [Asparagus officinalis]
          Length = 619

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 33/43 (76%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
 Frame = +2

Query: 26  HNLGALIESTMDGNKGTITLTPQHVRAVQS-HQNSLIQAQAAQ 151
           +NLG LIEST DGNKG IT TPQ +RAVQS HQN+L+QAQAAQ
Sbjct: 405 NNLGGLIESTKDGNKGIITQTPQQIRAVQSQHQNALLQAQAAQ 447


>ref|XP_020252987.1| uncharacterized protein LOC109830206 isoform X2 [Asparagus
           officinalis]
          Length = 205

 Score = 55.8 bits (133), Expect = 8e-07
 Identities = 32/73 (43%), Positives = 39/73 (53%)
 Frame = +2

Query: 50  STMDGNKGTITLTPQHVRAVQSHQNSLIQAQAAQQESDLYGPTLDRWRSLSNIQWTHESP 229
           STM G+K  +   P               +   ++  +L  P L RWR+LSNIQWTH S 
Sbjct: 32  STMAGSKKMLNWPP-------------FSSHCQREPGNLCDPALGRWRTLSNIQWTHASQ 78

Query: 230 KVLSKLSSCRSQI 268
           KVLSKLSS  SQI
Sbjct: 79  KVLSKLSSYHSQI 91


>ref|XP_020252986.1| uncharacterized protein LOC109830206 isoform X1 [Asparagus
           officinalis]
 gb|ONK77343.1| uncharacterized protein A4U43_C02F5550 [Asparagus officinalis]
          Length = 262

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = +2

Query: 152 QESDLYGPTLDRWRSLSNIQWTHESPKVLSKLSSCRSQI 268
           +  +L  P L RWR+LSNIQWTH S KVLSKLSS  SQI
Sbjct: 110 EPGNLCDPALGRWRTLSNIQWTHASQKVLSKLSSYHSQI 148


Top