BLASTX nr result

ID: Ophiopogon26_contig00022734 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00022734
         (633 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248123.1| high mobility group B protein 15-like isofor...    41   3e-06
ref|XP_020248124.1| high mobility group B protein 15-like isofor...    41   3e-06
ref|XP_020248126.1| uncharacterized protein LOC109825670 isoform...    41   3e-06

>ref|XP_020248123.1| high mobility group B protein 15-like isoform X1 [Asparagus
           officinalis]
          Length = 330

 Score = 41.2 bits (95), Expect(2) = 3e-06
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -1

Query: 336 MDWARHERELHEYREKIRYTQSK*APRTTAAEREN 232
           M+  R+++EL  Y E+IR  QS+ APR +AAEREN
Sbjct: 294 MEKERYKKELEAYEERIRLVQSQQAPRNSAAEREN 328



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -3

Query: 493 PQPCRSGYHLFFEEKFSTIRNLTSQSTRKFVSLIEESWGGLTEADRGAYNYLDGLGKAR 317
           P PCR+ + +FFEEK   IRNL      +    I+E+W   +E ++  Y   + + K R
Sbjct: 242 PTPCRTAFCIFFEEKL--IRNLPFPDMIEHFRHIQEAWAMFSEEEKRMYINRESMEKER 298


>ref|XP_020248124.1| high mobility group B protein 15-like isoform X2 [Asparagus
           officinalis]
          Length = 329

 Score = 41.2 bits (95), Expect(2) = 3e-06
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -1

Query: 336 MDWARHERELHEYREKIRYTQSK*APRTTAAEREN 232
           M+  R+++EL  Y E+IR  QS+ APR +AAEREN
Sbjct: 293 MEKERYKKELEAYEERIRLVQSQQAPRNSAAEREN 327



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -3

Query: 493 PQPCRSGYHLFFEEKFSTIRNLTSQSTRKFVSLIEESWGGLTEADRGAYNYLDGLGKAR 317
           P PCR+ + +FFEEK   IRNL      +    I+E+W   +E ++  Y   + + K R
Sbjct: 241 PTPCRTAFCIFFEEKL--IRNLPFPDMIEHFRHIQEAWAMFSEEEKRMYINRESMEKER 297


>ref|XP_020248126.1| uncharacterized protein LOC109825670 isoform X4 [Asparagus
           officinalis]
          Length = 299

 Score = 41.2 bits (95), Expect(2) = 3e-06
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -1

Query: 336 MDWARHERELHEYREKIRYTQSK*APRTTAAEREN 232
           M+  R+++EL  Y E+IR  QS+ APR +AAEREN
Sbjct: 263 MEKERYKKELEAYEERIRLVQSQQAPRNSAAEREN 297



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -3

Query: 493 PQPCRSGYHLFFEEKFSTIRNLTSQSTRKFVSLIEESWGGLTEADRGAYNYLDGLGKAR 317
           P PCR+ + +FFEEK   IRNL      +    I+E+W   +E ++  Y   + + K R
Sbjct: 211 PTPCRTAFCIFFEEKL--IRNLPFPDMIEHFRHIQEAWAMFSEEEKRMYINRESMEKER 267


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