BLASTX nr result

ID: Ophiopogon26_contig00021553 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00021553
         (569 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020260052.1| sister chromatid cohesion protein PDS5 homol...   100   6e-21
ref|XP_020260051.1| sister chromatid cohesion protein PDS5 homol...   100   6e-21

>ref|XP_020260052.1| sister chromatid cohesion protein PDS5 homolog A isoform X2
            [Asparagus officinalis]
          Length = 1480

 Score =  100 bits (248), Expect = 6e-21
 Identities = 47/67 (70%), Positives = 58/67 (86%)
 Frame = +2

Query: 56   HEDAVDVLGKNDSQGQSAILDEINGHFDNRIVPPTGTVKGKSKRPVPRASLKKSSSINVV 235
            HEDA+DVLG++DSQGQSAILDE+NG FD+R  P  G   GKSKR +P+ASLKKSS+IN+V
Sbjct: 1404 HEDAMDVLGQSDSQGQSAILDELNGRFDHRCFPSAGANNGKSKRSMPKASLKKSSNINIV 1463

Query: 236  DENTSIV 256
            DENTS++
Sbjct: 1464 DENTSML 1470


>ref|XP_020260051.1| sister chromatid cohesion protein PDS5 homolog A isoform X1
            [Asparagus officinalis]
          Length = 1481

 Score =  100 bits (248), Expect = 6e-21
 Identities = 47/67 (70%), Positives = 58/67 (86%)
 Frame = +2

Query: 56   HEDAVDVLGKNDSQGQSAILDEINGHFDNRIVPPTGTVKGKSKRPVPRASLKKSSSINVV 235
            HEDA+DVLG++DSQGQSAILDE+NG FD+R  P  G   GKSKR +P+ASLKKSS+IN+V
Sbjct: 1405 HEDAMDVLGQSDSQGQSAILDELNGRFDHRCFPSAGANNGKSKRSMPKASLKKSSNINIV 1464

Query: 236  DENTSIV 256
            DENTS++
Sbjct: 1465 DENTSML 1471


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