BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00020809
         (649 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONM60579.1| Mediator of RNA polymerase II transcription subun...   256   2e-81
ref|XP_020265972.1| LOW QUALITY PROTEIN: mediator of RNA polymer...   271   2e-81
gb|ACF81332.1| unknown [Zea mays]                                     256   3e-81
gb|ONM26234.1| Mediator of RNA polymerase II transcription subun...   252   6e-80
ref|XP_020108026.1| mediator of RNA polymerase II transcription ...   267   9e-80
gb|OAY79976.1| Mediator of RNA polymerase II transcription subun...   268   1e-79
ref|XP_020108025.1| mediator of RNA polymerase II transcription ...   267   3e-79
gb|ONM60554.1| Mediator of RNA polymerase II transcription subun...   256   2e-78
gb|ONM60566.1| Mediator of RNA polymerase II transcription subun...   256   2e-78
gb|ONM60562.1| Mediator of RNA polymerase II transcription subun...   256   6e-78
ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II tra...   264   6e-78
gb|OEL23805.1| Mediator of RNA polymerase II transcription subun...   263   7e-78
gb|ONM26223.1| Mediator of RNA polymerase II transcription subun...   253   5e-77
gb|ONM26222.1| Mediator of RNA polymerase II transcription subun...   253   7e-77
gb|PAN15470.1| hypothetical protein PAHAL_B04970 [Panicum hallii]     261   7e-77
ref|XP_010233853.1| PREDICTED: mediator of RNA polymerase II tra...   258   1e-76
gb|ONM60577.1| Mediator of RNA polymerase II transcription subun...   256   1e-76
gb|ONM26226.1| Mediator of RNA polymerase II transcription subun...   253   2e-76
gb|ONM60571.1| Mediator of RNA polymerase II transcription subun...   256   4e-76
ref|XP_003562441.1| PREDICTED: mediator of RNA polymerase II tra...   258   5e-76

>gb|ONM60579.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
          Length = 358

 Score =  256 bits (653), Expect = 2e-81
 Identities = 130/211 (61%), Positives = 151/211 (71%)
 Frame = +3

Query: 15  MLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKVKRWH 194
           MLPLPMAALVSLTIT KL+R+LEYI  VI QALENC+ GSSWPS PIIGALW++KV+RWH
Sbjct: 1   MLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPIIGALWTQKVRRWH 60

Query: 195 DFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSNKRSS 374
           DF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS++N+   
Sbjct: 61  DFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVGALLGDSITNQGLR 120

Query: 375 LSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSLXXXX 554
           L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA       P  LKSG+T L    
Sbjct: 121 LPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWCFNGPPQLKSGRTPLSCAA 180

Query: 555 XXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                   LG  L+CIAGG  +VQVLYEET+
Sbjct: 181 SMVQQVALLGGGLLCIAGGPLVVQVLYEETL 211


>ref|XP_020265972.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
            subunit 33A-like [Asparagus officinalis]
          Length = 1070

 Score =  271 bits (694), Expect = 2e-81
 Identities = 144/215 (66%), Positives = 160/215 (74%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G++ MLPLPMAALVSLTIT KL++NL+Y+HAVI QALENCSTG SWPS PIIGALWS+KV
Sbjct: 714  GREPMLPLPMAALVSLTITFKLDKNLDYMHAVIGQALENCSTGCSWPSMPIIGALWSQKV 773

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
            KRWHDFVVFSCT+SPFSRDKDAVAQLT SCFSSF GH        S+  VSGL  DS+  
Sbjct: 774  KRWHDFVVFSCTLSPFSRDKDAVAQLTRSCFSSFLGHN------NSSHRVSGLPWDSILT 827

Query: 363  KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
            K       PGLL   +CRTFHD HFVSN IL LV+EWSHNLA R N+ S   LKS Q SL
Sbjct: 828  KLLFPLSRPGLLIPSSCRTFHDVHFVSNIILNLVIEWSHNLASRYNNNSR--LKSAQNSL 885

Query: 543  XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                        LGASL+CIAGGG +VQVLYEET+
Sbjct: 886  SSAAAAVREVASLGASLICIAGGGHIVQVLYEETL 920


>gb|ACF81332.1| unknown [Zea mays]
          Length = 399

 Score =  256 bits (655), Expect = 3e-81
 Identities = 131/215 (60%), Positives = 152/215 (70%)
 Frame = +3

Query: 3   GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
           G   MLPLPMAALVSLTIT KL+R+LEYI  VI QALENC+ GSSWPS PIIGALW++KV
Sbjct: 38  GVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPIIGALWTQKV 97

Query: 183 KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
           +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS++N
Sbjct: 98  RRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVGALLGDSITN 157

Query: 363 KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
           +   L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA       P  LKSG+T L
Sbjct: 158 QGLRLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWCFNGPPQLKSGRTPL 217

Query: 543 XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                       LG  L+CIAGG  +VQVLYEET+
Sbjct: 218 SCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETL 252


>gb|ONM26234.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
          Length = 358

 Score =  252 bits (643), Expect = 6e-80
 Identities = 127/211 (60%), Positives = 151/211 (71%)
 Frame = +3

Query: 15  MLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKVKRWH 194
           MLPLPMAALVSLTIT KL+R+LEYI  VI  ALENC+ GSSWPS PIIGALW++KV+RWH
Sbjct: 1   MLPLPMAALVSLTITFKLDRSLEYIQGVIGHALENCAGGSSWPSMPIIGALWTQKVRRWH 60

Query: 195 DFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSNKRSS 374
           DF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS++++   
Sbjct: 61  DFIVLSCMRSPFGRDKDAVAQLIRSCFSSFLQSSSSGSDIIANRGVGALLGDSITDQGLR 120

Query: 375 LSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSLXXXX 554
           L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA   +   P  LKSG+T L    
Sbjct: 121 LPMAPGFVYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWSFNGPPQLKSGRTPLSCAA 180

Query: 555 XXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                   LG  L+CIAGG  +VQVLYE+T+
Sbjct: 181 SMAHQVAMLGGGLLCIAGGPLVVQVLYEDTL 211


>ref|XP_020108026.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
            X2 [Ananas comosus]
          Length = 1076

 Score =  267 bits (683), Expect = 9e-80
 Identities = 134/218 (61%), Positives = 159/218 (72%), Gaps = 3/218 (1%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G   MLPLPMAALVSLTIT KL++N EYIH V+ QALENC+ GSSWPS PIIG+LW++KV
Sbjct: 712  GMPPMLPLPMAALVSLTITFKLDKNSEYIHGVVGQALENCAGGSSWPSMPIIGSLWTQKV 771

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFG---HPGSTPHLTSNRGVSGLLGDS 353
            +RWHDF+V SCT SPFSRDK+AVAQL  SCFS+F G     GS  H+  NRGV GLLG +
Sbjct: 772  RRWHDFIVLSCTRSPFSRDKEAVAQLIRSCFSTFLGPSPSEGSFSHVMPNRGVIGLLGQA 831

Query: 354  MSNKRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQ 533
            ++ +   L I PG LYLRTCRTFHD HFVS  IL LV+EW+H LA    S   + LKSG+
Sbjct: 832  ITEQGVRLPITPGFLYLRTCRTFHDTHFVSEVILKLVIEWAHKLANEWASSGAARLKSGR 891

Query: 534  TSLXXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
             SL            LGASL+C+AGGG +VQV+YEET+
Sbjct: 892  RSLAAAISGVQQVASLGASLLCVAGGGLLVQVMYEETL 929


>gb|OAY79976.1| Mediator of RNA polymerase II transcription subunit 33A [Ananas
            comosus]
          Length = 1256

 Score =  268 bits (686), Expect = 1e-79
 Identities = 135/218 (61%), Positives = 159/218 (72%), Gaps = 3/218 (1%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G   MLPLPMAALVSLTIT KL++N EYIH V+ QALENC+ GSSWPS PIIG+LW++KV
Sbjct: 892  GMPPMLPLPMAALVSLTITFKLDKNSEYIHGVVGQALENCAGGSSWPSMPIIGSLWTQKV 951

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFG---HPGSTPHLTSNRGVSGLLGDS 353
            +RWHDF+V SCT SPFSRDK+AVAQL  SCFSSF G     GS  H+  NRGV GLLG +
Sbjct: 952  RRWHDFIVLSCTRSPFSRDKEAVAQLIRSCFSSFLGPSPSEGSFSHVMPNRGVIGLLGQA 1011

Query: 354  MSNKRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQ 533
            ++ +   L I PG LYLRTCRTFHD HFVS  IL LV+EW+H LA    S   + LKSG+
Sbjct: 1012 ITEQGVRLPITPGFLYLRTCRTFHDTHFVSEVILKLVIEWAHKLANEWASSGAARLKSGR 1071

Query: 534  TSLXXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
             SL            LGASL+C+AGGG +VQV+YEET+
Sbjct: 1072 RSLAAAISGVQQVASLGASLLCVAGGGLLVQVMYEETL 1109


>ref|XP_020108025.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
            X1 [Ananas comosus]
          Length = 1304

 Score =  267 bits (683), Expect = 3e-79
 Identities = 134/218 (61%), Positives = 159/218 (72%), Gaps = 3/218 (1%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G   MLPLPMAALVSLTIT KL++N EYIH V+ QALENC+ GSSWPS PIIG+LW++KV
Sbjct: 940  GMPPMLPLPMAALVSLTITFKLDKNSEYIHGVVGQALENCAGGSSWPSMPIIGSLWTQKV 999

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFG---HPGSTPHLTSNRGVSGLLGDS 353
            +RWHDF+V SCT SPFSRDK+AVAQL  SCFS+F G     GS  H+  NRGV GLLG +
Sbjct: 1000 RRWHDFIVLSCTRSPFSRDKEAVAQLIRSCFSTFLGPSPSEGSFSHVMPNRGVIGLLGQA 1059

Query: 354  MSNKRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQ 533
            ++ +   L I PG LYLRTCRTFHD HFVS  IL LV+EW+H LA    S   + LKSG+
Sbjct: 1060 ITEQGVRLPITPGFLYLRTCRTFHDTHFVSEVILKLVIEWAHKLANEWASSGAARLKSGR 1119

Query: 534  TSLXXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
             SL            LGASL+C+AGGG +VQV+YEET+
Sbjct: 1120 RSLAAAISGVQQVASLGASLLCVAGGGLLVQVMYEETL 1157


>gb|ONM60554.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
 gb|ONM60569.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
 gb|ONM60570.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
 gb|ONM60578.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
          Length = 649

 Score =  256 bits (655), Expect = 2e-78
 Identities = 131/215 (60%), Positives = 152/215 (70%)
 Frame = +3

Query: 3   GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
           G   MLPLPMAALVSLTIT KL+R+LEYI  VI QALENC+ GSSWPS PIIGALW++KV
Sbjct: 288 GVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPIIGALWTQKV 347

Query: 183 KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
           +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS++N
Sbjct: 348 RRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVGALLGDSITN 407

Query: 363 KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
           +   L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA       P  LKSG+T L
Sbjct: 408 QGLRLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWCFNGPPQLKSGRTPL 467

Query: 543 XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                       LG  L+CIAGG  +VQVLYEET+
Sbjct: 468 SCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETL 502


>gb|ONM60566.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
          Length = 664

 Score =  256 bits (655), Expect = 2e-78
 Identities = 131/215 (60%), Positives = 152/215 (70%)
 Frame = +3

Query: 3   GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
           G   MLPLPMAALVSLTIT KL+R+LEYI  VI QALENC+ GSSWPS PIIGALW++KV
Sbjct: 303 GVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPIIGALWTQKV 362

Query: 183 KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
           +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS++N
Sbjct: 363 RRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVGALLGDSITN 422

Query: 363 KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
           +   L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA       P  LKSG+T L
Sbjct: 423 QGLRLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWCFNGPPQLKSGRTPL 482

Query: 543 XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                       LG  L+CIAGG  +VQVLYEET+
Sbjct: 483 SCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETL 517


>gb|ONM60562.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
          Length = 710

 Score =  256 bits (655), Expect = 6e-78
 Identities = 131/215 (60%), Positives = 152/215 (70%)
 Frame = +3

Query: 3   GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
           G   MLPLPMAALVSLTIT KL+R+LEYI  VI QALENC+ GSSWPS PIIGALW++KV
Sbjct: 349 GVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPIIGALWTQKV 408

Query: 183 KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
           +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS++N
Sbjct: 409 RRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVGALLGDSITN 468

Query: 363 KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
           +   L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA       P  LKSG+T L
Sbjct: 469 QGLRLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWCFNGPPQLKSGRTPL 528

Query: 543 XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                       LG  L+CIAGG  +VQVLYEET+
Sbjct: 529 SCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETL 563


>ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Musa acuminata subsp. malaccensis]
          Length = 1330

 Score =  264 bits (674), Expect = 6e-78
 Identities = 134/218 (61%), Positives = 161/218 (73%), Gaps = 3/218 (1%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G   MLPLPMAALVSLTIT KL++++EYIH V+ QALENC+TG +WPS PIIGALW++KV
Sbjct: 968  GMPPMLPLPMAALVSLTITFKLDKSVEYIHGVVGQALENCATGCTWPSMPIIGALWTQKV 1027

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHP---GSTPHLTSNRGVSGLLGDS 353
            +RWHDF+V SC+ SPFSRDKDAVAQL  SCF+SF G     GS  H+T++RGV+GLLG  
Sbjct: 1028 RRWHDFIVLSCSRSPFSRDKDAVAQLIRSCFTSFLGPSVVGGS--HITAHRGVNGLLGQF 1085

Query: 354  MSNKRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQ 533
            MS++   L IAPG LYLRTCRTFHD HFV+  I  LV+EW+H LA    S  P+ LKS +
Sbjct: 1086 MSDQGVRLPIAPGFLYLRTCRTFHDTHFVNEVIFKLVIEWAHKLANEWASDGPAHLKSSR 1145

Query: 534  TSLXXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
             SL            LG  L+CIAGG +MVQVLYEET+
Sbjct: 1146 ISLAAAASGVQQVATLGTCLLCIAGGVEMVQVLYEETL 1183


>gb|OEL23805.1| Mediator of RNA polymerase II transcription subunit 33A
            [Dichanthelium oligosanthes]
          Length = 1248

 Score =  263 bits (673), Expect = 7e-78
 Identities = 132/215 (61%), Positives = 155/215 (72%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G   MLPLPMAALVSLTIT KL+R+LEYI  +I QALENC+ GSSWPS PIIGALW++KV
Sbjct: 887  GVPPMLPLPMAALVSLTITFKLDRSLEYIQGIIGQALENCAGGSSWPSMPIIGALWAQKV 946

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
            +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   +T+NRGV  LLGDS++N
Sbjct: 947  RRWHDFIVLSCLRSPFGRDKDAVAQLVQSCFSSFLQSSSSGSDITANRGVGALLGDSITN 1006

Query: 363  KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
            +   L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA R +   P  LKSG+T L
Sbjct: 1007 QGLRLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWAHKLANRLSFNGPPQLKSGRTPL 1066

Query: 543  XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                        LG  L+CIAGG  +VQVLYEET+
Sbjct: 1067 SCAASMAHQVAMLGGGLLCIAGGPLVVQVLYEETL 1101


>gb|ONM26223.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
 gb|ONM26231.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
 gb|ONM26240.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
 gb|ONM26241.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
          Length = 648

 Score =  253 bits (645), Expect = 5e-77
 Identities = 128/215 (59%), Positives = 152/215 (70%)
 Frame = +3

Query: 3   GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
           G   MLPLPMAALVSLTIT KL+R+LEYI  VI  ALENC+ GSSWPS PIIGALW++KV
Sbjct: 287 GVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGHALENCAGGSSWPSMPIIGALWTQKV 346

Query: 183 KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
           +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS+++
Sbjct: 347 RRWHDFIVLSCMRSPFGRDKDAVAQLIRSCFSSFLQSSSSGSDIIANRGVGALLGDSITD 406

Query: 363 KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
           +   L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA   +   P  LKSG+T L
Sbjct: 407 QGLRLPMAPGFVYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWSFNGPPQLKSGRTPL 466

Query: 543 XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                       LG  L+CIAGG  +VQVLYE+T+
Sbjct: 467 SCAASMAHQVAMLGGGLLCIAGGPLVVQVLYEDTL 501


>gb|ONM26222.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
          Length = 663

 Score =  253 bits (645), Expect = 7e-77
 Identities = 128/215 (59%), Positives = 152/215 (70%)
 Frame = +3

Query: 3   GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
           G   MLPLPMAALVSLTIT KL+R+LEYI  VI  ALENC+ GSSWPS PIIGALW++KV
Sbjct: 302 GVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGHALENCAGGSSWPSMPIIGALWTQKV 361

Query: 183 KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
           +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS+++
Sbjct: 362 RRWHDFIVLSCMRSPFGRDKDAVAQLIRSCFSSFLQSSSSGSDIIANRGVGALLGDSITD 421

Query: 363 KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
           +   L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA   +   P  LKSG+T L
Sbjct: 422 QGLRLPMAPGFVYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWSFNGPPQLKSGRTPL 481

Query: 543 XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                       LG  L+CIAGG  +VQVLYE+T+
Sbjct: 482 SCAASMAHQVAMLGGGLLCIAGGPLVVQVLYEDTL 516


>gb|PAN15470.1| hypothetical protein PAHAL_B04970 [Panicum hallii]
          Length = 1303

 Score =  261 bits (666), Expect = 7e-77
 Identities = 132/215 (61%), Positives = 154/215 (71%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G   MLPLPMA LVSLTIT KL+R+LEYI  VI QALENC+ GSSWPS PIIGALW++KV
Sbjct: 942  GVPPMLPLPMAVLVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPIIGALWTQKV 1001

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
            +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   +T+NRGV  LLGDS++N
Sbjct: 1002 RRWHDFIVLSCLRSPFGRDKDAVAQLVQSCFSSFLQSSSSGSDITANRGVGALLGDSITN 1061

Query: 363  KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
            +   L +APG +YLRTC+TFHD +FVS  IL  V+EWSH LA   +   P  LKSG+TSL
Sbjct: 1062 QGLRLPMAPGFIYLRTCQTFHDTYFVSEVILKQVIEWSHKLANGWSFNGPPQLKSGRTSL 1121

Query: 543  XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                        LG  L+CIAGG  +VQVLYEET+
Sbjct: 1122 SCAASMAHQVAMLGGGLLCIAGGPLVVQVLYEETL 1156


>ref|XP_010233853.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like isoform X2 [Brachypodium distachyon]
 gb|KQK14607.1| hypothetical protein BRADI_1g17590v3 [Brachypodium distachyon]
          Length = 1074

 Score =  258 bits (660), Expect = 1e-76
 Identities = 131/216 (60%), Positives = 159/216 (73%), Gaps = 1/216 (0%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G   MLPLPMAALVSLTIT KL+++LEYIH +I QALENC+ GSSWPS PIIGALW++KV
Sbjct: 711  GVPPMLPLPMAALVSLTITFKLDKSLEYIHGIIGQALENCAGGSSWPSMPIIGALWTQKV 770

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSF-FGHPGSTPHLTSNRGVSGLLGDSMS 359
            +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF    P S   +T++RGV  L+G+S++
Sbjct: 771  RRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLLSSPSSRSDITASRGVGALMGESIT 830

Query: 360  NKRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTS 539
            ++   L +APG +YLRTCRTFHD +FVS TIL  V++ SH LA   +S  PS LKSG+T 
Sbjct: 831  DQGLQLPMAPGFIYLRTCRTFHDTYFVSETILKQVIDCSHKLANGWSSNGPSHLKSGRTP 890

Query: 540  LXXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
            L            LGA L+CIAGG  +VQVLYEET+
Sbjct: 891  LSGAASMAYQVAMLGAGLLCIAGGPLVVQVLYEETL 926


>gb|ONM60577.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
          Length = 915

 Score =  256 bits (655), Expect = 1e-76
 Identities = 131/215 (60%), Positives = 152/215 (70%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G   MLPLPMAALVSLTIT KL+R+LEYI  VI QALENC+ GSSWPS PIIGALW++KV
Sbjct: 554  GVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPIIGALWTQKV 613

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
            +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS++N
Sbjct: 614  RRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVGALLGDSITN 673

Query: 363  KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
            +   L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA       P  LKSG+T L
Sbjct: 674  QGLRLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWCFNGPPQLKSGRTPL 733

Query: 543  XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                        LG  L+CIAGG  +VQVLYEET+
Sbjct: 734  SCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETL 768


>gb|ONM26226.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
          Length = 709

 Score =  253 bits (645), Expect = 2e-76
 Identities = 128/215 (59%), Positives = 152/215 (70%)
 Frame = +3

Query: 3   GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
           G   MLPLPMAALVSLTIT KL+R+LEYI  VI  ALENC+ GSSWPS PIIGALW++KV
Sbjct: 348 GVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGHALENCAGGSSWPSMPIIGALWTQKV 407

Query: 183 KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
           +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS+++
Sbjct: 408 RRWHDFIVLSCMRSPFGRDKDAVAQLIRSCFSSFLQSSSSGSDIIANRGVGALLGDSITD 467

Query: 363 KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
           +   L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA   +   P  LKSG+T L
Sbjct: 468 QGLRLPMAPGFVYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWSFNGPPQLKSGRTPL 527

Query: 543 XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                       LG  L+CIAGG  +VQVLYE+T+
Sbjct: 528 SCAASMAHQVAMLGGGLLCIAGGPLVVQVLYEDTL 562


>gb|ONM60571.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
          Length = 1009

 Score =  256 bits (655), Expect = 4e-76
 Identities = 131/215 (60%), Positives = 152/215 (70%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G   MLPLPMAALVSLTIT KL+R+LEYI  VI QALENC+ GSSWPS PIIGALW++KV
Sbjct: 648  GVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPIIGALWTQKV 707

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSFFGHPGSTPHLTSNRGVSGLLGDSMSN 362
            +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF     S   + +NRGV  LLGDS++N
Sbjct: 708  RRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVGALLGDSITN 767

Query: 363  KRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTSL 542
            +   L +APG +YLRTCRTFHD +FVS  IL  V+EW+H LA       P  LKSG+T L
Sbjct: 768  QGLRLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWCFNGPPQLKSGRTPL 827

Query: 543  XXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
                        LG  L+CIAGG  +VQVLYEET+
Sbjct: 828  SCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETL 862


>ref|XP_003562441.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like isoform X1 [Brachypodium distachyon]
 gb|KQK14609.1| hypothetical protein BRADI_1g17590v3 [Brachypodium distachyon]
          Length = 1327

 Score =  258 bits (660), Expect = 5e-76
 Identities = 131/216 (60%), Positives = 159/216 (73%), Gaps = 1/216 (0%)
 Frame = +3

Query: 3    GKDAMLPLPMAALVSLTITSKLERNLEYIHAVIDQALENCSTGSSWPSTPIIGALWSKKV 182
            G   MLPLPMAALVSLTIT KL+++LEYIH +I QALENC+ GSSWPS PIIGALW++KV
Sbjct: 964  GVPPMLPLPMAALVSLTITFKLDKSLEYIHGIIGQALENCAGGSSWPSMPIIGALWTQKV 1023

Query: 183  KRWHDFVVFSCTVSPFSRDKDAVAQLTCSCFSSF-FGHPGSTPHLTSNRGVSGLLGDSMS 359
            +RWHDF+V SC  SPF RDKDAVAQL  SCFSSF    P S   +T++RGV  L+G+S++
Sbjct: 1024 RRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLLSSPSSRSDITASRGVGALMGESIT 1083

Query: 360  NKRSSLSIAPGLLYLRTCRTFHDAHFVSNTILGLVVEWSHNLAVRCNSGSPSCLKSGQTS 539
            ++   L +APG +YLRTCRTFHD +FVS TIL  V++ SH LA   +S  PS LKSG+T 
Sbjct: 1084 DQGLQLPMAPGFIYLRTCRTFHDTYFVSETILKQVIDCSHKLANGWSSNGPSHLKSGRTP 1143

Query: 540  LXXXXXXXXXXXXLGASLMCIAGGGQMVQVLYEETI 647
            L            LGA L+CIAGG  +VQVLYEET+
Sbjct: 1144 LSGAASMAYQVAMLGAGLLCIAGGPLVVQVLYEETL 1179