BLASTX nr result

ID: Ophiopogon26_contig00020750 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00020750
         (456 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256092.1| protein MARD1 [Asparagus officinalis] >gi|11...    74   6e-13
ref|XP_020275489.1| protein MARD1-like [Asparagus officinalis]         64   5e-09
gb|ONK65031.1| uncharacterized protein A4U43_C07F32760 [Asparagu...    64   5e-09

>ref|XP_020256092.1| protein MARD1 [Asparagus officinalis]
 gb|ONK74331.1| uncharacterized protein A4U43_C03F5140 [Asparagus officinalis]
          Length = 289

 Score = 74.3 bits (181), Expect = 6e-13
 Identities = 41/51 (80%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
 Frame = +3

Query: 306 MLKKSSRP-VSAKQGLMADPFSIPSPTGNYSKPPVSSPLFPFYPRPRVFVG 455
           MLKKSSRP VS+KQGLMADPFS+PSPTGN SKPP SSPLFP    PR+FVG
Sbjct: 1   MLKKSSRPAVSSKQGLMADPFSLPSPTGNCSKPP-SSPLFPL--SPRLFVG 48


>ref|XP_020275489.1| protein MARD1-like [Asparagus officinalis]
          Length = 275

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 31/44 (70%), Positives = 35/44 (79%)
 Frame = +3

Query: 306 MLKKSSRPVSAKQGLMADPFSIPSPTGNYSKPPVSSPLFPFYPR 437
           MLKK+SRPVS KQ LMAD  S+P PT NY+KPP +SPLFP  PR
Sbjct: 1   MLKKNSRPVSNKQNLMADHLSLPCPTANYNKPP-TSPLFPLSPR 43


>gb|ONK65031.1| uncharacterized protein A4U43_C07F32760 [Asparagus officinalis]
          Length = 287

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 31/44 (70%), Positives = 35/44 (79%)
 Frame = +3

Query: 306 MLKKSSRPVSAKQGLMADPFSIPSPTGNYSKPPVSSPLFPFYPR 437
           MLKK+SRPVS KQ LMAD  S+P PT NY+KPP +SPLFP  PR
Sbjct: 1   MLKKNSRPVSNKQNLMADHLSLPCPTANYNKPP-TSPLFPLSPR 43


Top