BLASTX nr result

ID: Ophiopogon26_contig00020707 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00020707
         (438 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009398152.1| PREDICTED: protein FAF-like, chloroplastic [...    64   4e-09
gb|PKA63741.1| Protein FAF-like, chloroplastic [Apostasia shenzh...    63   9e-09
gb|PKA51790.1| Protein FAF-like, chloroplastic [Apostasia shenzh...    60   7e-08
ref|XP_009413641.1| PREDICTED: protein FAF-like, chloroplastic [...    60   1e-07
ref|XP_018677686.1| PREDICTED: protein FAF-like, chloroplastic [...    59   2e-07
ref|XP_009388789.1| PREDICTED: protein FAF-like, chloroplastic [...    56   2e-06

>ref|XP_009398152.1| PREDICTED: protein FAF-like, chloroplastic [Musa acuminata subsp.
           malaccensis]
          Length = 448

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 48/130 (36%), Positives = 58/130 (44%), Gaps = 14/130 (10%)
 Frame = -3

Query: 436 PSQNYLHAERQNGRLLLSFINTASSHNPC--------------TATESTSNVAENTAAET 299
           PS+NYLHA+R+ GRLLLSFI+ A+ H+P               T  E  +   EN  AE 
Sbjct: 206 PSKNYLHAQREGGRLLLSFID-ATFHDPSSDSTEPGQPQEQNRTVDEELNETKENEVAEI 264

Query: 298 EHVEQFQRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTQPQQNCCGGAGAMKVHRS 119
             +E+                                  VSTQPQQ      GAMKV RS
Sbjct: 265 ARLEEEDEGEENCYEEGEDEEEEEEEVEVVDRGTVIEVTVSTQPQQ---PSGGAMKVLRS 321

Query: 118 SIVINKFVSC 89
           S+VINKFV C
Sbjct: 322 SLVINKFVGC 331


>gb|PKA63741.1| Protein FAF-like, chloroplastic [Apostasia shenzhenica]
          Length = 423

 Score = 63.2 bits (152), Expect = 9e-09
 Identities = 43/114 (37%), Positives = 54/114 (47%)
 Frame = -3

Query: 436 PSQNYLHAERQNGRLLLSFINTASSHNPCTATESTSNVAENTAAETEHVEQFQRTXXXXX 257
           P+QN+LHAERQ GRL LSFI+++   N   A  S      N +   E+ E+ +       
Sbjct: 190 PAQNFLHAERQAGRLRLSFIDSSCPSNSIAA--SVVVAESNNSVNKENDEEMEMKMMQAA 247

Query: 256 XXXXXXXXXXXXXXXXXXXXXXXXXVSTQPQQNCCGGAGAMKVHRSSIVINKFV 95
                                     S QPQQ   GGA A+KVHRSS+VINKFV
Sbjct: 248 EEEAVEEEEEEEVEVVDRGTVVEVKFSAQPQQ--VGGATAVKVHRSSLVINKFV 299


>gb|PKA51790.1| Protein FAF-like, chloroplastic [Apostasia shenzhenica]
          Length = 394

 Score = 60.5 bits (145), Expect = 7e-08
 Identities = 49/118 (41%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
 Frame = -3

Query: 436 PSQNYLHAERQNGRLLLSFINTA-SSHNPCTATESTSN-VAENTAAETEH--VEQFQRTX 269
           PS+NYLHAER  GRLLLSF+ T     +P  ATE + N V E+ A E E   VE+ +   
Sbjct: 179 PSRNYLHAERHGGRLLLSFVETCFRPTSPAAATEQSVNLVKEDDAVEEEDDVVEEEEE-- 236

Query: 268 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTQPQQNCCGGAGAMKVHRSSIVINKFV 95
                                        VSTQPQ    G A  +KVHRSS+VINKFV
Sbjct: 237 --------------DEVEVVDRGTVVEVKVSTQPQP-VSGAAPPVKVHRSSLVINKFV 279


>ref|XP_009413641.1| PREDICTED: protein FAF-like, chloroplastic [Musa acuminata subsp.
           malaccensis]
          Length = 422

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 46/127 (36%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
 Frame = -3

Query: 436 PSQNYLHAERQNGRLLLSFINTASSHNPCTA------TESTSNVAENTAAETEHVEQFQR 275
           PS+ YLHA R +GRL+LSF ++  + N  T        E  +++ EN A E E  E+F+ 
Sbjct: 195 PSKCYLHARRVDGRLVLSFTDSTQAPNKVTQPQQHEDVEQDADIKENEATE-EKDEEFEE 253

Query: 274 TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTQPQQNCCGGAGAMKVHRSSIVINKFV 95
                                           STQPQQ      GAMKVHRSS+VINKFV
Sbjct: 254 KNCCEEEEEEEEVEVVDRGTIVEVKV------STQPQQR----TGAMKVHRSSLVINKFV 303

Query: 94  SCMAVDG 74
           S   + G
Sbjct: 304 SGTPLSG 310


>ref|XP_018677686.1| PREDICTED: protein FAF-like, chloroplastic [Musa acuminata subsp.
           malaccensis]
          Length = 366

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 46/131 (35%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
 Frame = -3

Query: 436 PSQNYLHAERQNGRLLLSFINTASSHNPCTATES-TSNVAENTAAETEHV---EQFQRTX 269
           P QNYLHA+R +GRLLLSFI+  S   P   +E+  S   ++  A+ E V    Q +   
Sbjct: 146 PCQNYLHAQRVDGRLLLSFIDATSEDEPGYESETLQSREQQDVDAKDEEVTDITQLEVES 205

Query: 268 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTQPQQNCCGGAGAMKVHRSSIVINKFVSC 89
                                        VS QPQQ     +GA KVHRSS+VINKFV  
Sbjct: 206 EEKNCREEEEEEEEEEVEVVDRGTVVEVKVSRQPQQQ----SGATKVHRSSLVINKFVGG 261

Query: 88  MAVDGDQEKTN 56
             +  D   +N
Sbjct: 262 TPLSDDDSTSN 272


>ref|XP_009388789.1| PREDICTED: protein FAF-like, chloroplastic [Musa acuminata subsp.
           malaccensis]
          Length = 454

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 43/120 (35%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
 Frame = -3

Query: 436 PSQNYLHAERQNGRLLLSFINTASSHNPCTATESTSNVAENTAAETEHVE------QFQR 275
           PSQNY HA+R +GRLLLSFI+ A+  +P  ++++     E+   E E +E      + + 
Sbjct: 214 PSQNYFHAQRGDGRLLLSFID-ATFDDPEASSDNIQINEESNGIEVEEIERSAEEEEVEE 272

Query: 274 TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTQPQQNCCGGAGAMKVHRSSIVINKFV 95
                                          VSTQPQQ      GAMKV RSS+VINKFV
Sbjct: 273 KNCCAEDEDEEEEEEEEEVEVVDRGAVIEVKVSTQPQQQT---GGAMKVLRSSLVINKFV 329


Top