BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00020615
         (1284 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258675.1| protein RNA-directed DNA methylation 3, part...   667   0.0  
gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagu...   661   0.0  
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat...   555   e-178
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat...   555   e-178
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat...   555   e-178
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat...   555   e-178
ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylat...   539   e-172
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo...   513   e-164
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo...   512   e-164
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo...   512   e-164
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo...   512   e-164
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co...   505   e-161
gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria ital...   470   e-157
ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dend...   492   e-155
ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylat...   482   e-152
ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylat...   482   e-152
gb|AQK94720.1| Protein RNA-directed DNA methylation 3 [Zea mays]      457   e-151
ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phal...   481   e-151
gb|AQK94717.1| Protein RNA-directed DNA methylation 3 [Zea mays]      457   e-149
gb|AQK87064.1| Protein RNA-directed DNA methylation 3, partial [...   442   e-149

>ref|XP_020258675.1| protein RNA-directed DNA methylation 3, partial [Asparagus
            officinalis]
          Length = 1734

 Score =  667 bits (1721), Expect = 0.0
 Identities = 339/428 (79%), Positives = 372/428 (86%), Gaps = 1/428 (0%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADKACD+VEACKGFFNIY+TRMGLVP+ +IPHLLS RNK C +SKGTWVRMK+GNYKGD
Sbjct: 163  EADKACDVVEACKGFFNIYSTRMGLVPNTEIPHLLSIRNKACILSKGTWVRMKSGNYKGD 222

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            LGQVVDYD+ RK+ATIKLVPRIDLQAIAKK+GGGVSLKEAAVP+PRLISS ELE FRSHI
Sbjct: 223  LGQVVDYDDMRKKATIKLVPRIDLQAIAKKFGGGVSLKEAAVPSPRLISSHELEQFRSHI 282

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            EIRRDRHSG+ FEILDGLMLKDG+LYKKVS+ASIV+WGV+PSKDELLKFTEMSK +EEDV
Sbjct: 283  EIRRDRHSGECFEILDGLMLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDV 342

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGV-XXXXXXXXXXXXX 718
            SWLS+VYNVRKK+K S+ +D KG+SE GN F LHDLVLFGRK FGV              
Sbjct: 343  SWLSSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLR 402

Query: 719  XXXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYK 898
               EGQEV+T+K+E IKS CVDKMFTASDRHRKTI IND +KVL+GPLEGR+G   HMYK
Sbjct: 403  GDKEGQEVITVKAEAIKSQCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYK 462

Query: 899  GTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSS 1078
            GTLFIYDE+QE NSGIFC KSDLCE ITP KD SF K GNK+SSSF+Q PV S EQEDSS
Sbjct: 463  GTLFIYDESQEGNSGIFCTKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVISSEQEDSS 520

Query: 1079 YTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQF 1258
             TFSRNR  ESNQ FS+GQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV+EQ 
Sbjct: 521  CTFSRNRRRESNQIFSVGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVDEQL 580

Query: 1259 LSIPNIKR 1282
            LS PN+KR
Sbjct: 581  LSDPNLKR 588


>gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagus officinalis]
          Length = 1710

 Score =  661 bits (1705), Expect = 0.0
 Identities = 338/428 (78%), Positives = 371/428 (86%), Gaps = 1/428 (0%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADKACD+VEACKGFFNIY+TRMGLVP+ +IPHLLS RNK C +SKGTWVRMK+GNYKGD
Sbjct: 144  EADKACDVVEACKGFFNIYSTRMGLVPNTEIPHLLSIRNKACILSKGTWVRMKSGNYKGD 203

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            LGQVVDYD+ RK+ATIKLVPRIDLQAIAKK+GGGVSLKEAAVP+PRLISS ELE FRSHI
Sbjct: 204  LGQVVDYDDMRKKATIKLVPRIDLQAIAKKFGGGVSLKEAAVPSPRLISSHELEQFRSHI 263

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            EIRRDRHSG+ FEILDGLMLKDG+LYKKVS+ASIV+WGV+PSKDELLKFTEMSK +EEDV
Sbjct: 264  EIRRDRHSGECFEILDGLMLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDV 323

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGV-XXXXXXXXXXXXX 718
            SWLS+VYNVRKK+K S+ +D KG+SE GN F LHDLVLFGRK FGV              
Sbjct: 324  SWLSSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLR 383

Query: 719  XXXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYK 898
               EGQEV+T+K+E IKS CVDKMFTASDRHRKTI IND +KVL+GPLEGR+G   HMYK
Sbjct: 384  GDKEGQEVITVKAEAIKSQCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYK 443

Query: 899  GTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSS 1078
            GTLFIYDE+QE NSGIFC KSDLCE ITP KD SF K GNK+SSSF+Q PV S EQEDSS
Sbjct: 444  GTLFIYDESQEGNSGIFCTKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVISSEQEDSS 501

Query: 1079 YTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQF 1258
              FSRNR  ESNQ FS+GQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV+EQ 
Sbjct: 502  --FSRNRRRESNQIFSVGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVDEQL 559

Query: 1259 LSIPNIKR 1282
            LS PN+KR
Sbjct: 560  LSDPNLKR 567


>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Elaeis
            guineensis]
          Length = 2066

 Score =  555 bits (1431), Expect = e-178
 Identities = 270/427 (63%), Positives = 338/427 (79%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADK CDI+EACKGF+++Y++++  VP +++P L S+R+K C +S+G+WVRMK+G YKGD
Sbjct: 201  EADKECDIIEACKGFYSVYSSKINRVPGSEVPQLFSSRSKSCEVSEGSWVRMKSGKYKGD 260

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG+SLK+AAVPAPRLISS ELE FR HI
Sbjct: 261  LAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQAAVPAPRLISSHELEMFRPHI 320

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E+RRDR +G+ F+ILDGLMLKDGFLYK+VS+ S++ W VQPS  ELLKF+ +SK  +ED+
Sbjct: 321  EVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDL 380

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
            +W+S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV              
Sbjct: 381  TWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKG 440

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG EV+T+K +DIKS CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRHMYKG
Sbjct: 441  GMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKG 500

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSY 1081
            TLFIYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++D S+
Sbjct: 501  TLFIYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQDRSH 553

Query: 1082 TFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFL 1261
             F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE ++L
Sbjct: 554  GFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVEAEYL 613

Query: 1262 SIPNIKR 1282
            S+PN+KR
Sbjct: 614  SVPNVKR 620


>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Elaeis
            guineensis]
          Length = 2067

 Score =  555 bits (1431), Expect = e-178
 Identities = 270/427 (63%), Positives = 338/427 (79%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADK CDI+EACKGF+++Y++++  VP +++P L S+R+K C +S+G+WVRMK+G YKGD
Sbjct: 201  EADKECDIIEACKGFYSVYSSKINRVPGSEVPQLFSSRSKSCEVSEGSWVRMKSGKYKGD 260

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG+SLK+AAVPAPRLISS ELE FR HI
Sbjct: 261  LAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQAAVPAPRLISSHELEMFRPHI 320

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E+RRDR +G+ F+ILDGLMLKDGFLYK+VS+ S++ W VQPS  ELLKF+ +SK  +ED+
Sbjct: 321  EVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDL 380

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
            +W+S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV              
Sbjct: 381  TWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKG 440

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG EV+T+K +DIKS CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRHMYKG
Sbjct: 441  GMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKG 500

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSY 1081
            TLFIYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++D S+
Sbjct: 501  TLFIYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQDRSH 553

Query: 1082 TFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFL 1261
             F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE ++L
Sbjct: 554  GFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVEAEYL 613

Query: 1262 SIPNIKR 1282
            S+PN+KR
Sbjct: 614  SVPNVKR 620


>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Elaeis
            guineensis]
          Length = 2068

 Score =  555 bits (1431), Expect = e-178
 Identities = 270/427 (63%), Positives = 338/427 (79%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADK CDI+EACKGF+++Y++++  VP +++P L S+R+K C +S+G+WVRMK+G YKGD
Sbjct: 203  EADKECDIIEACKGFYSVYSSKINRVPGSEVPQLFSSRSKSCEVSEGSWVRMKSGKYKGD 262

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG+SLK+AAVPAPRLISS ELE FR HI
Sbjct: 263  LAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQAAVPAPRLISSHELEMFRPHI 322

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E+RRDR +G+ F+ILDGLMLKDGFLYK+VS+ S++ W VQPS  ELLKF+ +SK  +ED+
Sbjct: 323  EVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDL 382

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
            +W+S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV              
Sbjct: 383  TWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKG 442

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG EV+T+K +DIKS CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRHMYKG
Sbjct: 443  GMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKG 502

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSY 1081
            TLFIYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++D S+
Sbjct: 503  TLFIYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQDRSH 555

Query: 1082 TFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFL 1261
             F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE ++L
Sbjct: 556  GFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVEAEYL 615

Query: 1262 SIPNIKR 1282
            S+PN+KR
Sbjct: 616  SVPNVKR 622


>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Elaeis
            guineensis]
          Length = 2069

 Score =  555 bits (1431), Expect = e-178
 Identities = 270/427 (63%), Positives = 338/427 (79%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADK CDI+EACKGF+++Y++++  VP +++P L S+R+K C +S+G+WVRMK+G YKGD
Sbjct: 203  EADKECDIIEACKGFYSVYSSKINRVPGSEVPQLFSSRSKSCEVSEGSWVRMKSGKYKGD 262

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG+SLK+AAVPAPRLISS ELE FR HI
Sbjct: 263  LAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQAAVPAPRLISSHELEMFRPHI 322

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E+RRDR +G+ F+ILDGLMLKDGFLYK+VS+ S++ W VQPS  ELLKF+ +SK  +ED+
Sbjct: 323  EVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDL 382

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
            +W+S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV              
Sbjct: 383  TWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKG 442

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG EV+T+K +DIKS CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRHMYKG
Sbjct: 443  GMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKG 502

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSY 1081
            TLFIYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++D S+
Sbjct: 503  TLFIYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQDRSH 555

Query: 1082 TFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFL 1261
             F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE ++L
Sbjct: 556  GFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVEAEYL 615

Query: 1262 SIPNIKR 1282
            S+PN+KR
Sbjct: 616  SVPNVKR 622


>ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylation 3 [Phoenix
            dactylifera]
          Length = 2039

 Score =  539 bits (1389), Expect = e-172
 Identities = 262/427 (61%), Positives = 335/427 (78%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADK  D+ EACKGF+++Y++++  V  +++P L S+R+K C +S+G+WVRMK+G YKGD
Sbjct: 199  EADKEYDVTEACKGFYSVYSSKINRVHGSEVPQLFSSRSKSCEVSEGSWVRMKSGKYKGD 258

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV  D+ +K+  +KLVPR+DLQAI+KK+GGGVSLK+AAVPAPRLISS ELE FR HI
Sbjct: 259  LAQVVAVDDGQKKVMVKLVPRVDLQAISKKFGGGVSLKQAAVPAPRLISSHELEMFRPHI 318

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E+RRDR +G+ FEILDGLMLKDGFLYK+VS+ S++ WGVQPS  ELLKF+ + K  +E +
Sbjct: 319  EVRRDRQTGEIFEILDGLMLKDGFLYKRVSIGSVICWGVQPSDMELLKFSSVGKDGDEHL 378

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
            +W+S+VY+ R KM+ +EAAD +  ++ GNGF LHD VLFG K FGV              
Sbjct: 379  NWVSSVYHGRNKMRPTEAADQQVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKG 438

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG EV+T+K +DIKS CVDKMFTASDR+ KTI INDTVKVL+GPL+ ++G+V+HMYKG
Sbjct: 439  GVEGPEVVTVKIQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDKQGIVKHMYKG 498

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSY 1081
            TLFIYDEN+ ENSG FCAKS  CEN+   K       G KSS SF+Q+P+ S E++D S+
Sbjct: 499  TLFIYDENETENSGFFCAKSASCENMKESK-------GEKSSHSFSQAPMGSYEEQDRSH 551

Query: 1082 TFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFL 1261
             F+  R +E +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVK+DSLVK+ITVE ++L
Sbjct: 552  GFNWRRQTERDQVFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKVDSLVKIITVEAEYL 611

Query: 1262 SIPNIKR 1282
            S+PN+KR
Sbjct: 612  SVPNVKR 618


>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
          Length = 1714

 Score =  513 bits (1320), Expect = e-164
 Identities = 258/430 (60%), Positives = 326/430 (75%), Gaps = 3/430 (0%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADKA D+ EACKGF NIY  R+ LVP +++ HLLS+RNK C IS+G+WVRMK+G YKGD
Sbjct: 198  EADKANDVSEACKGFCNIYPGRINLVPPSEVSHLLSSRNKSCGISQGSWVRMKSGKYKGD 257

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV+ D+ RKR  IKL+PRIDLQAI+KK+GGG+SLK AAVPAPRLISS EL+ FR  I
Sbjct: 258  LAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKHAAVPAPRLISSHELDEFRPLI 317

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E RRDR SG+ FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+
Sbjct: 318  ETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDL 377

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
             W+S+VY+ RKK++ ++ +D    +   N + LHDLVLFG+K FGV              
Sbjct: 378  DWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKG 437

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G
Sbjct: 438  GTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRG 497

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG-GNKSSSSFNQSPVRSCEQED 1072
            ++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF    G+ S+S F++ P  S E +D
Sbjct: 498  SIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLGDGSASLFSEPPTISFENQD 557

Query: 1073 SSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEE 1252
            SS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+ 
Sbjct: 558  SSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVDA 617

Query: 1253 QFLSIPNIKR 1282
            +FLS+P  KR
Sbjct: 618  KFLSVPTRKR 627


>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
          Length = 1705

 Score =  512 bits (1319), Expect = e-164
 Identities = 258/431 (59%), Positives = 326/431 (75%), Gaps = 4/431 (0%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADKA D+ EACKGF NIY  R+ LVP +++ HLLS+RNK C IS+G+WVRMK+G YKGD
Sbjct: 198  EADKANDVSEACKGFCNIYPGRINLVPPSEVSHLLSSRNKSCGISQGSWVRMKSGKYKGD 257

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV+ D+ RKR  IKL+PRIDLQAI+KK+GGG+SLK AAVPAPRLISS EL+ FR  I
Sbjct: 258  LAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKHAAVPAPRLISSHELDEFRPLI 317

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E RRDR SG+ FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+
Sbjct: 318  ETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDL 377

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
             W+S+VY+ RKK++ ++ +D    +   N + LHDLVLFG+K FGV              
Sbjct: 378  DWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKG 437

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G
Sbjct: 438  GTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRG 497

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSCEQE 1069
            ++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S E +
Sbjct: 498  SIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISFENQ 557

Query: 1070 DSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVE 1249
            DSS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+
Sbjct: 558  DSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVD 617

Query: 1250 EQFLSIPNIKR 1282
             +FLS+P  KR
Sbjct: 618  AKFLSVPTRKR 628


>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
          Length = 1714

 Score =  512 bits (1319), Expect = e-164
 Identities = 258/431 (59%), Positives = 326/431 (75%), Gaps = 4/431 (0%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADKA D+ EACKGF NIY  R+ LVP +++ HLLS+RNK C IS+G+WVRMK+G YKGD
Sbjct: 198  EADKANDVSEACKGFCNIYPGRINLVPPSEVSHLLSSRNKSCGISQGSWVRMKSGKYKGD 257

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV+ D+ RKR  IKL+PRIDLQAI+KK+GGG+SLK AAVPAPRLISS EL+ FR  I
Sbjct: 258  LAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKHAAVPAPRLISSHELDEFRPLI 317

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E RRDR SG+ FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+
Sbjct: 318  ETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDL 377

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
             W+S+VY+ RKK++ ++ +D    +   N + LHDLVLFG+K FGV              
Sbjct: 378  DWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKG 437

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G
Sbjct: 438  GTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRG 497

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSCEQE 1069
            ++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S E +
Sbjct: 498  SIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISFENQ 557

Query: 1070 DSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVE 1249
            DSS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+
Sbjct: 558  DSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVD 617

Query: 1250 EQFLSIPNIKR 1282
             +FLS+P  KR
Sbjct: 618  AKFLSVPTRKR 628


>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
          Length = 1715

 Score =  512 bits (1319), Expect = e-164
 Identities = 258/431 (59%), Positives = 326/431 (75%), Gaps = 4/431 (0%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADKA D+ EACKGF NIY  R+ LVP +++ HLLS+RNK C IS+G+WVRMK+G YKGD
Sbjct: 198  EADKANDVSEACKGFCNIYPGRINLVPPSEVSHLLSSRNKSCGISQGSWVRMKSGKYKGD 257

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV+ D+ RKR  IKL+PRIDLQAI+KK+GGG+SLK AAVPAPRLISS EL+ FR  I
Sbjct: 258  LAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKHAAVPAPRLISSHELDEFRPLI 317

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E RRDR SG+ FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+
Sbjct: 318  ETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDL 377

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
             W+S+VY+ RKK++ ++ +D    +   N + LHDLVLFG+K FGV              
Sbjct: 378  DWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKG 437

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G
Sbjct: 438  GTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRG 497

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSCEQE 1069
            ++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S E +
Sbjct: 498  SIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISFENQ 557

Query: 1070 DSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVE 1249
            DSS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+
Sbjct: 558  DSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVD 617

Query: 1250 EQFLSIPNIKR 1282
             +FLS+P  KR
Sbjct: 618  AKFLSVPTRKR 628


>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
          Length = 1701

 Score =  505 bits (1300), Expect = e-161
 Identities = 257/430 (59%), Positives = 324/430 (75%), Gaps = 3/430 (0%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADKA D+ EACKGF NIY  R+ LVP +++ HLLS+RNK C IS+G+WVRMK+G YKGD
Sbjct: 198  EADKANDVSEACKGFCNIYPGRINLVPPSEVSHLLSSRNKSCGISQGSWVRMKSGKYKGD 257

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV+ D+ RKR  IKL+PRIDLQAI+KK+GGG+SLK AAVPAPRLISS ELE     I
Sbjct: 258  LAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKHAAVPAPRLISSHELEPL---I 314

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E RRDR SG+ FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+
Sbjct: 315  ETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDL 374

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
             W+S+VY+ RKK++ ++ +D    +   N + LHDLVLFG+K FGV              
Sbjct: 375  DWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKG 434

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G
Sbjct: 435  GTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRG 494

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG-GNKSSSSFNQSPVRSCEQED 1072
            ++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF    G+ S+S F++ P  S E +D
Sbjct: 495  SIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLGDGSASLFSEPPTISFENQD 554

Query: 1073 SSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEE 1252
            SS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+ 
Sbjct: 555  SSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVDA 614

Query: 1253 QFLSIPNIKR 1282
            +FLS+P  KR
Sbjct: 615  KFLSVPTRKR 624


>gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria italica]
          Length = 711

 Score =  470 bits (1210), Expect = e-157
 Identities = 240/442 (54%), Positives = 316/442 (71%), Gaps = 19/442 (4%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EA+KACD+ EACKGF ++YA+R+  VP+ ++P LLS+R KP  IS+GTWVRMKNGNYKGD
Sbjct: 212  EAEKACDVTEACKGFCSVYASRIISVPAAEVPSLLSSRTKPFEISRGTWVRMKNGNYKGD 271

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV  D+ RKR  IK++PR+DL AI++KYGG +SLKEA VPAPRLISSQELE FR HI
Sbjct: 272  LAQVVSEDDGRKRVLIKIIPRVDLHAISRKYGGAISLKEAVVPAPRLISSQELEFFRPHI 331

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTE--MSKADEE 535
            E++RDR +G+ FE+LDGLM KDGFLYK+V+L+S+++WG+QP++ ELLKF+   +++A  +
Sbjct: 332  EMKRDRQTGEVFEVLDGLMFKDGFLYKRVALSSLIYWGIQPTETELLKFSSSPINRASAD 391

Query: 536  DVSWLSTVYNVRK--------------KMKSSEAADAKGASEL---GNGFILHDLVLFGR 664
            D+ W+S++Y  +K              K KSS+A+ A  ++E     + F LHDLVLFGR
Sbjct: 392  DLDWVSSIYGPKKRNLPAERGIKSPSSKTKSSKASKASTSTENYDDNDEFNLHDLVLFGR 451

Query: 665  KGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVK 844
            K FGV                EG  V T+K +DIK  CVDKMFTA DR +K I INDTV 
Sbjct: 452  KDFGVIIAIEKDGLRILKGGPEGSAV-TVKKQDIKKGCVDKMFTAVDRQKKIISINDTVN 510

Query: 845  VLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKS 1024
            VL+GP +G++GVV+H+Y GTLFIY+E++ EN G FCA+   CEN+   K+SS  +  +  
Sbjct: 511  VLEGPFQGKQGVVKHLYMGTLFIYNESESENCGFFCAQCGSCENVKKRKESSTTENLDNP 570

Query: 1025 SSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSD 1204
               F++ P    E  D+     R   S   Q FSIGQ LRIRKGPLKGYLCRVV+I+R+D
Sbjct: 571  IPMFSE-PYEQNEHRDT----ERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVKIFRND 625

Query: 1205 VTVKLDSLVKVITVEEQFLSIP 1270
            VTVKLDSL+K++TV+ +FLS+P
Sbjct: 626  VTVKLDSLLKIVTVQAEFLSVP 647


>ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dendrobium catenatum]
 gb|PKU72137.1| Putative transcription elongation factor SPT5 like 1 [Dendrobium
            catenatum]
          Length = 1946

 Score =  492 bits (1266), Expect = e-155
 Identities = 249/451 (55%), Positives = 315/451 (69%), Gaps = 24/451 (5%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EAD+AC++ EAC G   +Y +R+ LVP N+ P+LLS + K C I KG WVRMKNG YKGD
Sbjct: 202  EADRACNVFEACNGLCILYPSRIELVPRNEAPNLLSIQRKACGIVKGMWVRMKNGKYKGD 261

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L +VV  ++A+KR TIKLVPRIDLQAI+KK+GGG SLK AA+PAPRLISS ELE FR HI
Sbjct: 262  LAEVVLVNDAKKRVTIKLVPRIDLQAISKKFGGGTSLKAAAIPAPRLISSHELEDFRPHI 321

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E+RRDR +G+ FE+LDGLMLKDG+LYKKVS+ S++ WGVQP+ DEL+KF E+ K + +DV
Sbjct: 322  EVRRDRETGEIFEVLDGLMLKDGYLYKKVSMGSLIHWGVQPTSDELMKFEELDKDEVKDV 381

Query: 542  SWLSTVYNVRKKM------------------------KSSEAADAKGASELGNGFILHDL 649
             WLS++Y  R K                         K  E ++ K A +  NGF + DL
Sbjct: 382  DWLSSIYKARMKKKLPETSHQKNGEKYNQKDGEKSNPKVGEKSNQKDADKQINGFDIDDL 441

Query: 650  VLFGRKGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYI 829
            VLFG+K  G+                 G EV++I    IK  CVDK+FTA+DR  KTI I
Sbjct: 442  VLFGKKSCGIIIDKENDTFKVLKGDVNGSEVVSINIRVIKKICVDKVFTATDRCMKTISI 501

Query: 830  NDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRK 1009
            +D VKV +GPLEGREG+VRHMYKG LFIYDE Q EN+G FCA S +C+ +   +D    K
Sbjct: 502  DDVVKVFEGPLEGREGIVRHMYKGVLFIYDECQSENNGFFCANSGICDLVKKSRDLGGGK 561

Query: 1010 GGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVR 1189
               ++  SF QSP+R  EQ+D+S +FSRN+ S S   FS+GQTLRIRKGPLKGYLCRV+R
Sbjct: 562  LSTRAGPSFAQSPIRLSEQDDNSQSFSRNQQSNSLGTFSVGQTLRIRKGPLKGYLCRVIR 621

Query: 1190 IYRSDVTVKLDSLVKVITVEEQFLSIPNIKR 1282
            + R+D+TVKLDSL K++TV+E+ LS+PN KR
Sbjct: 622  MRRADITVKLDSLGKLLTVDEKLLSLPNSKR 652


>ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1808

 Score =  482 bits (1240), Expect = e-152
 Identities = 240/428 (56%), Positives = 323/428 (75%), Gaps = 2/428 (0%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADK  D++EACKGF ++Y++R+ +VP +++PHLL+ RNK   +  G  VR+K+G YKGD
Sbjct: 197  EADKLYDVIEACKGFCSVYSSRINIVPRSEVPHLLAIRNKLPEVCTGKLVRLKSGKYKGD 256

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV  D+ +K+ TIKLVPRIDLQAIAKK+GGG+SLK AAVPAPRLISS ELE FR HI
Sbjct: 257  LAQVVAVDDGQKQLTIKLVPRIDLQAIAKKFGGGISLKLAAVPAPRLISSHELESFRPHI 316

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E++RDR +G+ FE+LDG+MLKDG+L+KKVS  S++F GVQPS  ELL F++++    ED+
Sbjct: 317  EVKRDRLTGELFEVLDGMMLKDGYLFKKVSTGSVIFSGVQPSSSELLMFSDVTNNMVEDL 376

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
            +W+S++YN RKK   +E  D + +    N + LHDLVLFG+K +GV              
Sbjct: 377  NWVSSIYNARKKKPGAEILDDEVSVVTKNDYGLHDLVLFGQKHYGVIIAVEKDCFKILKG 436

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG+ V+T+K +DIK+ CVDKMFTA D  + TI+IND VK+L GPL+GREGVV+HMYKG
Sbjct: 437  DIEGENVVTVKIQDIKNSCVDKMFTALDWKKTTIFINDIVKILAGPLQGREGVVKHMYKG 496

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKG--GNKSSSSFNQSPVRSCEQEDS 1075
            TLFI+ E + +NSG F  KS  CE +   K+S   K   G ++++SF+QSP+R+ ++E++
Sbjct: 497  TLFIHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKAGKGKEANTSFSQSPIRTFDRENN 556

Query: 1076 SYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQ 1255
            ++  +R   S++ Q FSIGQTLRIR+GPLKGYLCRVV IYRSDVTVKLDSLVK+ITV+++
Sbjct: 557  AHGSTRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVVGIYRSDVTVKLDSLVKLITVKDK 616

Query: 1256 FLSIPNIK 1279
             L++P IK
Sbjct: 617  SLAVPKIK 624


>ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1809

 Score =  482 bits (1240), Expect = e-152
 Identities = 240/428 (56%), Positives = 323/428 (75%), Gaps = 2/428 (0%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADK  D++EACKGF ++Y++R+ +VP +++PHLL+ RNK   +  G  VR+K+G YKGD
Sbjct: 198  EADKLYDVIEACKGFCSVYSSRINIVPRSEVPHLLAIRNKLPEVCTGKLVRLKSGKYKGD 257

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV  D+ +K+ TIKLVPRIDLQAIAKK+GGG+SLK AAVPAPRLISS ELE FR HI
Sbjct: 258  LAQVVAVDDGQKQLTIKLVPRIDLQAIAKKFGGGISLKLAAVPAPRLISSHELESFRPHI 317

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E++RDR +G+ FE+LDG+MLKDG+L+KKVS  S++F GVQPS  ELL F++++    ED+
Sbjct: 318  EVKRDRLTGELFEVLDGMMLKDGYLFKKVSTGSVIFSGVQPSSSELLMFSDVTNNMVEDL 377

Query: 542  SWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXX 721
            +W+S++YN RKK   +E  D + +    N + LHDLVLFG+K +GV              
Sbjct: 378  NWVSSIYNARKKKPGAEILDDEVSVVTKNDYGLHDLVLFGQKHYGVIIAVEKDCFKILKG 437

Query: 722  XXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKG 901
              EG+ V+T+K +DIK+ CVDKMFTA D  + TI+IND VK+L GPL+GREGVV+HMYKG
Sbjct: 438  DIEGENVVTVKIQDIKNSCVDKMFTALDWKKTTIFINDIVKILAGPLQGREGVVKHMYKG 497

Query: 902  TLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKG--GNKSSSSFNQSPVRSCEQEDS 1075
            TLFI+ E + +NSG F  KS  CE +   K+S   K   G ++++SF+QSP+R+ ++E++
Sbjct: 498  TLFIHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKAGKGKEANTSFSQSPIRTFDRENN 557

Query: 1076 SYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQ 1255
            ++  +R   S++ Q FSIGQTLRIR+GPLKGYLCRVV IYRSDVTVKLDSLVK+ITV+++
Sbjct: 558  AHGSTRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVVGIYRSDVTVKLDSLVKLITVKDK 617

Query: 1256 FLSIPNIK 1279
             L++P IK
Sbjct: 618  SLAVPKIK 625


>gb|AQK94720.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 748

 Score =  457 bits (1175), Expect = e-151
 Identities = 238/444 (53%), Positives = 309/444 (69%), Gaps = 21/444 (4%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EA+KACD+ EACKGF ++Y +R+  VP+ ++P LLS+R KP  IS+GTW+RMKNGNYKGD
Sbjct: 208  EAEKACDVTEACKGFCSVYTSRITSVPAAEVPSLLSSRTKPFEISRGTWIRMKNGNYKGD 267

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV  D+ RK+  IK+VPR+DL AI+KK+GG VSLK AAVPAPRLISSQELE FR HI
Sbjct: 268  LAQVVSVDDGRKKVMIKIVPRVDLHAISKKFGGAVSLKGAAVPAPRLISSQELEFFRPHI 327

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTE--MSKADEE 535
            EI+RDR +G+ FE+LDGLM KDGFLYKKV+L+S+++WG+QP++ ELLKF+    ++A  +
Sbjct: 328  EIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGIQPTETELLKFSSSPSNRASAD 387

Query: 536  DVSWLSTVYNVRK--------------KMKSSEAADAKGASELGN-----GFILHDLVLF 658
            D+ WLS +Y  +K              K++SS+A+D K ++   N      F LHDLVL+
Sbjct: 388  DLDWLSGMYGSKKRNLPEKRDMESSSSKIRSSKASDLKASTSTENYDENDEFNLHDLVLY 447

Query: 659  GRKGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDT 838
            GRK FGV                EG  V  ++ +DIK  CVDKMFTA D  +KTI INDT
Sbjct: 448  GRKDFGVIVAVEKDGFRILKGGPEGSAV-KVRKQDIKKGCVDKMFTAVDHQKKTISINDT 506

Query: 839  VKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGN 1018
            V V++GP +G++GVV+H+Y G LFIY+E++ EN G FCA+S  CE I     SS  +  +
Sbjct: 507  VNVVEGPFQGKQGVVKHLYLGILFIYNESESENCGFFCAQSGSCEKIRKGLGSSTTESSD 566

Query: 1019 KSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYR 1198
             ++  F   P  + EQ     T  R   S   Q FSIGQ LRIRKGPLKGYLCRVVRI+R
Sbjct: 567  FTTPMF---PEPAYEQNGHRDT-ERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFR 622

Query: 1199 SDVTVKLDSLVKVITVEEQFLSIP 1270
            +DVTVKLDSL+K++TV+   LS+P
Sbjct: 623  NDVTVKLDSLLKIVTVQADLLSVP 646


>ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phalaenopsis equestris]
          Length = 1960

 Score =  481 bits (1239), Expect = e-151
 Identities = 244/451 (54%), Positives = 311/451 (68%), Gaps = 24/451 (5%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EADKA ++ EAC G   +Y +R+ LVP N+ P+LLS + K   ISKG WVR+KNG YKGD
Sbjct: 203  EADKAGNVFEACNGLCFLYPSRIELVPRNETPNLLSIQKKSSGISKGMWVRLKNGKYKGD 262

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L +V+  ++++KR TIKLVPRIDLQAIAKK+GGG SLK AA+PAPRLIS+ ELE FR HI
Sbjct: 263  LAEVIFVNDSKKRVTIKLVPRIDLQAIAKKFGGGTSLKAAAIPAPRLISTHELEDFRPHI 322

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMSKADEEDV 541
            E+RRDR +G+ FE+LDGLMLKDG+LYKKVS+ S++ WGVQPS DEL KF +M     +DV
Sbjct: 323  EVRRDRETGEIFEVLDGLMLKDGYLYKKVSICSLIHWGVQPSSDELTKFEDMGNDGVKDV 382

Query: 542  SWLSTVYNVRKK------------------------MKSSEAADAKGASELGNGFILHDL 649
             WLS++Y  + K                         K+ E ++ K   +  NGF + D 
Sbjct: 383  GWLSSIYKTQIKNKLPETSHQKNGEKSKQKNGEKSNRKNGEKSNQKDEDKQRNGFEIDDF 442

Query: 650  VLFGRKGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYI 829
            VLFG+K  G+                   EV++I    IK +CVDK+FTA+DR  KTI+I
Sbjct: 443  VLFGKKDCGIIIDKENDVFKVLKGDANSSEVVSINIGVIKKNCVDKVFTATDRGMKTIFI 502

Query: 830  NDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRK 1009
            +D VKV +GPLEGREG+V+HMYKG  FIYDE Q EN+G FCAKS++C+ +   +D    K
Sbjct: 503  DDVVKVSEGPLEGREGIVKHMYKGVFFIYDECQSENNGFFCAKSEICDLVKKSRDFGGGK 562

Query: 1010 GGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVR 1189
              + +  SF QSP+RS EQ+D+S +FSRN  S S   FS+GQTLRI KGPLKGYLCRV+R
Sbjct: 563  LSSNAGPSFAQSPIRSSEQDDNSQSFSRNHQSNSRGTFSVGQTLRICKGPLKGYLCRVIR 622

Query: 1190 IYRSDVTVKLDSLVKVITVEEQFLSIPNIKR 1282
            IYR+DVTVKLDSL K++TV+E+ LS PN KR
Sbjct: 623  IYRADVTVKLDSLGKLLTVDEKLLSFPNSKR 653


>gb|AQK94717.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 925

 Score =  457 bits (1175), Expect = e-149
 Identities = 238/444 (53%), Positives = 309/444 (69%), Gaps = 21/444 (4%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EA+KACD+ EACKGF ++Y +R+  VP+ ++P LLS+R KP  IS+GTW+RMKNGNYKGD
Sbjct: 59   EAEKACDVTEACKGFCSVYTSRITSVPAAEVPSLLSSRTKPFEISRGTWIRMKNGNYKGD 118

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV  D+ RK+  IK+VPR+DL AI+KK+GG VSLK AAVPAPRLISSQELE FR HI
Sbjct: 119  LAQVVSVDDGRKKVMIKIVPRVDLHAISKKFGGAVSLKGAAVPAPRLISSQELEFFRPHI 178

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTE--MSKADEE 535
            EI+RDR +G+ FE+LDGLM KDGFLYKKV+L+S+++WG+QP++ ELLKF+    ++A  +
Sbjct: 179  EIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGIQPTETELLKFSSSPSNRASAD 238

Query: 536  DVSWLSTVYNVRK--------------KMKSSEAADAKGASELGN-----GFILHDLVLF 658
            D+ WLS +Y  +K              K++SS+A+D K ++   N      F LHDLVL+
Sbjct: 239  DLDWLSGMYGSKKRNLPEKRDMESSSSKIRSSKASDLKASTSTENYDENDEFNLHDLVLY 298

Query: 659  GRKGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDT 838
            GRK FGV                EG  V  ++ +DIK  CVDKMFTA D  +KTI INDT
Sbjct: 299  GRKDFGVIVAVEKDGFRILKGGPEGSAV-KVRKQDIKKGCVDKMFTAVDHQKKTISINDT 357

Query: 839  VKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGN 1018
            V V++GP +G++GVV+H+Y G LFIY+E++ EN G FCA+S  CE I     SS  +  +
Sbjct: 358  VNVVEGPFQGKQGVVKHLYLGILFIYNESESENCGFFCAQSGSCEKIRKGLGSSTTESSD 417

Query: 1019 KSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYR 1198
             ++  F   P  + EQ     T  R   S   Q FSIGQ LRIRKGPLKGYLCRVVRI+R
Sbjct: 418  FTTPMF---PEPAYEQNGHRDT-ERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFR 473

Query: 1199 SDVTVKLDSLVKVITVEEQFLSIP 1270
            +DVTVKLDSL+K++TV+   LS+P
Sbjct: 474  NDVTVKLDSLLKIVTVQADLLSVP 497


>gb|AQK87064.1| Protein RNA-directed DNA methylation 3, partial [Zea mays]
          Length = 483

 Score =  442 bits (1136), Expect = e-149
 Identities = 228/430 (53%), Positives = 298/430 (69%), Gaps = 21/430 (4%)
 Frame = +2

Query: 2    EADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGD 181
            EA+KA  + EACKGF ++Y +R+  VP+ ++P LLS+R KP  IS+GTW+RMKNGNYKGD
Sbjct: 59   EAEKAGYVTEACKGFCSVYTSRITSVPATEVPSLLSSRTKPFEISRGTWIRMKNGNYKGD 118

Query: 182  LGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHI 361
            L QVV+ D  RK+  IK++PR+DL AI+KK+GG VSLKEAAVPAPRLISSQELE FR HI
Sbjct: 119  LAQVVNMDSGRKKVMIKIIPRVDLHAISKKFGGAVSLKEAAVPAPRLISSQELEFFRPHI 178

Query: 362  EIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTE--MSKADEE 535
            EI+RDR +G+ FE+LDGLM KDGFLYKKV+L+S+++WG+QP++ ELLKF+    ++A  +
Sbjct: 179  EIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGIQPTETELLKFSSSPSNRASAD 238

Query: 536  DVSWLSTVYNVRK--------------KMKSSEAADAKGASELGN-----GFILHDLVLF 658
            D+ WLS +Y  +K              K+KSS+A D KG++   N      F LHDLVL+
Sbjct: 239  DLDWLSGMYGSKKRNLPAERDMKSSSSKIKSSKAPDLKGSTSTENYDDNDEFNLHDLVLY 298

Query: 659  GRKGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDT 838
            GRK FGV                EG  V T++ +DIK  CVDKMFTA D H+KTI INDT
Sbjct: 299  GRKDFGVIIAVEKDGFRILKGGPEGSAV-TVRKQDIKKGCVDKMFTAVDHHKKTISINDT 357

Query: 839  VKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGN 1018
            V V++GP +G++G+V+H+Y G LFI++E++ EN G FCA+S  CE I     SS  +  +
Sbjct: 358  VNVVEGPFQGKQGLVKHLYLGILFIFNESESENCGFFCAQSGSCEKIRKGLGSSTTENSD 417

Query: 1019 KSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYR 1198
              +  F++      E  ++   +   R     Q FSIGQ LRIRKGPLKGYLCRVVRI+R
Sbjct: 418  FPTPMFSEPAYEQNEHRNTEGPYRSTR----EQLFSIGQMLRIRKGPLKGYLCRVVRIFR 473

Query: 1199 SDVTVKLDSL 1228
            +DVTVKLDSL
Sbjct: 474  NDVTVKLDSL 483