BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00020598
         (572 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020268608.1| pentatricopeptide repeat-containing protein ...    96   1e-19
ref|XP_008790140.1| PREDICTED: pentatricopeptide repeat-containi...    60   5e-07
ref|XP_010905037.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06

>ref|XP_020268608.1| pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Asparagus officinalis]
 gb|ONK68951.1| uncharacterized protein A4U43_C05F17740 [Asparagus officinalis]
          Length = 957

 Score = 96.3 bits (238), Expect = 1e-19
 Identities = 61/141 (43%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
 Frame = -2

Query: 421 MGSLRFSAVPDIYESKRCKLLGNFDPNVVKCVGHNLWTSHAGVGFXXXXXXXXXXXXXRF 242
           MGSLRF A P+IYES+R KLLG FDP V     H+L +S  GVG              R 
Sbjct: 1   MGSLRFGAAPEIYESRRSKLLGQFDPYV-----HSLCSSQFGVGLLVYRKKIVRLDAERL 55

Query: 241 CGFFVHRRGENSSSLKISDIVGLTRCKKTVVHGLEANVGSVESNKECNAAVIGESLTL-K 65
            GF  H+R + S  + + +     R ++T+V GLEA+ GS + NK+ + A++GE LTL  
Sbjct: 56  FGFSFHQRKKKSLKILVINSNPNGRFQQTLVDGLEASEGS-QLNKDSDEALVGEGLTLMM 114

Query: 64  NPVSNSVEVQNKINEDIVGKK 2
           NP++NSVE+Q+K + + V KK
Sbjct: 115 NPITNSVEIQSKSDANNVLKK 135


>ref|XP_008790140.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Phoenix dactylifera]
          Length = 982

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 55/162 (33%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
 Frame = -2

Query: 421 MGSLRFSAVPDIYESKRCKLLGNFDPNVVKCVGHNLWTSHAGVGFXXXXXXXXXXXXXRF 242
           M SL+F AV +IYESKRC   GN     V  VG N   SH  + F              +
Sbjct: 1   MDSLKFCAVREIYESKRCNFGGNSYLYGVDWVGLNSSVSHISIRFVGDRKKIVQGDMRCY 60

Query: 241 CGFFVHRRGENSSSLKISDI----VGLT---------RCKKTVVHG---------LEANV 128
            GF V  R +  SSL   +     VG T         R K  VV G          +  V
Sbjct: 61  -GFCVDCRVDKCSSLSFPETRFSSVGGTRRWDHNPKIRLKHIVVRGSGVIGGPQSADEFV 119

Query: 127 GSVESNKECNAAVIGESLTLKNPVSNSVEVQNKINEDIVGKK 2
              +S++  +AA++  SLTLK+PV N  EV NK+ +D   +K
Sbjct: 120 KKSQSSQADDAALLDVSLTLKDPVPNLTEVPNKVLKDSAERK 161


>ref|XP_010905037.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Elaeis guineensis]
          Length = 982

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 53/162 (32%), Positives = 70/162 (43%), Gaps = 22/162 (13%)
 Frame = -2

Query: 421 MGSLRFSAVPDIYESKRCKLLGNFDPNVVKCVGHNLWTSHAGVGFXXXXXXXXXXXXXRF 242
           M SL+  AVP+IYESKRC    N     V C+G N   SH  + F              +
Sbjct: 1   MDSLKSCAVPEIYESKRCNFWRNSYLYGVDCIGLNSSVSHISIRFAGDRKKIVKGDVRCY 60

Query: 241 CGFFVHRRGENSSSLKISDI----VG---------LTRCKKTVVHGLEANVG-------- 125
            GF V  R +  SS    +     VG           R +  VV GLE   G        
Sbjct: 61  -GFCVDCRVDKCSSSSFPETQFASVGGSRRWDHNPKIRLQHIVVRGLEGIGGPRSASEFV 119

Query: 124 -SVESNKECNAAVIGESLTLKNPVSNSVEVQNKINEDIVGKK 2
            + +S++  +AA +  SLT KNPV N +EV NK  +D   +K
Sbjct: 120 KNPQSSQAGDAAFLDVSLTPKNPVPNLMEVPNKALKDGAERK 161