BLASTX nr result

ID: Ophiopogon26_contig00020349 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00020349
         (474 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251661.1| protein CROWDED NUCLEI 1-like isoform X1 [As...   113   4e-26
gb|ONK81360.1| uncharacterized protein A4U43_C01F28220 [Asparagu...   113   4e-26
dbj|BAM10996.1| nuclear matrix constituent protein 1 [Allium cepa]     66   1e-09
ref|XP_019710051.1| PREDICTED: protein CROWDED NUCLEI 1 [Elaeis ...    64   6e-09
ref|XP_009403930.1| PREDICTED: protein CROWDED NUCLEI 1 [Musa ac...    59   3e-07

>ref|XP_020251661.1| protein CROWDED NUCLEI 1-like isoform X1 [Asparagus officinalis]
          Length = 1133

 Score =  113 bits (283), Expect = 4e-26
 Identities = 79/170 (46%), Positives = 94/170 (55%), Gaps = 17/170 (10%)
 Frame = -1

Query: 459  NSRQKRHRPHTSEMTNSVLEADSEAHXXXXXXXXXXXXXXXSAIGVQAPGDRRYNLRRST 280
            ++RQKR RP TSEMT S LEA+ + H               S  G+QA G+RRYNLRRST
Sbjct: 922  SARQKRRRPQTSEMTTSELEAE-DTHSQSVSVGGRRKRRQTSTTGMQATGERRYNLRRST 980

Query: 279  IAGSS----RAFSDQAKGH-------------GEGDHVGEGTPKDGANISPSSCFXXXXX 151
            +A SS    +A SDQAKGH              +GDHVGEGT K+GA ISPSS F     
Sbjct: 981  VAASSAAATQATSDQAKGHKAESQQLSHDNEISKGDHVGEGTSKNGAVISPSSAFVEENN 1040

Query: 150  XXXXXXXXXXXVMLILQKCTTRNVMEVSSKREMVEVCVESDVIRSVENSE 1
                           +QKCTTR+VMEVSSK   + V VE + I SV+ SE
Sbjct: 1041 KVSH----------TMQKCTTRSVMEVSSKE--MGVRVEREFIESVDISE 1078


>gb|ONK81360.1| uncharacterized protein A4U43_C01F28220 [Asparagus officinalis]
          Length = 1230

 Score =  113 bits (283), Expect = 4e-26
 Identities = 79/170 (46%), Positives = 94/170 (55%), Gaps = 17/170 (10%)
 Frame = -1

Query: 459  NSRQKRHRPHTSEMTNSVLEADSEAHXXXXXXXXXXXXXXXSAIGVQAPGDRRYNLRRST 280
            ++RQKR RP TSEMT S LEA+ + H               S  G+QA G+RRYNLRRST
Sbjct: 1019 SARQKRRRPQTSEMTTSELEAE-DTHSQSVSVGGRRKRRQTSTTGMQATGERRYNLRRST 1077

Query: 279  IAGSS----RAFSDQAKGH-------------GEGDHVGEGTPKDGANISPSSCFXXXXX 151
            +A SS    +A SDQAKGH              +GDHVGEGT K+GA ISPSS F     
Sbjct: 1078 VAASSAAATQATSDQAKGHKAESQQLSHDNEISKGDHVGEGTSKNGAVISPSSAFVEENN 1137

Query: 150  XXXXXXXXXXXVMLILQKCTTRNVMEVSSKREMVEVCVESDVIRSVENSE 1
                           +QKCTTR+VMEVSSK   + V VE + I SV+ SE
Sbjct: 1138 KVSH----------TMQKCTTRSVMEVSSKE--MGVRVEREFIESVDISE 1175


>dbj|BAM10996.1| nuclear matrix constituent protein 1 [Allium cepa]
          Length = 1217

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 62/162 (38%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
 Frame = -1

Query: 462  ANSRQKRHRPHTSEMTNS---VLEADSEAHXXXXXXXXXXXXXXXSAIGVQAP-GDRRYN 295
            +N+RQKR R   SEMTNS   V E++S++                +A  VQAP  +RRYN
Sbjct: 1005 SNTRQKRRRAPASEMTNSEHDVEESESQSQSISIGRGRRKKRQTSAASEVQAPVVERRYN 1064

Query: 294  LRRSTIAGSS----RAFSDQAKGHGEGDHVGEGTPKDGANISPSSCFXXXXXXXXXXXXX 127
            LR ST+A +S     A SDQAK   +  H       D   IS                  
Sbjct: 1065 LRHSTVAKNSVAATLAVSDQAKVQTKASHQAS---HDNNQISMGD---------DPALEG 1112

Query: 126  XXXVMLILQKCTTRNVMEVSSKREMVEVCVESDVIRSVENSE 1
               V   +QK TT +VMEVSSK  M E   E+ V+RSVE SE
Sbjct: 1113 SHKVTHTVQKTTTASVMEVSSKPAMEETHEENIVVRSVEISE 1154


>ref|XP_019710051.1| PREDICTED: protein CROWDED NUCLEI 1 [Elaeis guineensis]
          Length = 1263

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 48/118 (40%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
 Frame = -1

Query: 474  DQVVANSRQKRHRPHTSEMTNSVLEAD-SEAHXXXXXXXXXXXXXXXSAIGVQAPGDRRY 298
            D V  +SRQKR    TS MT   LEAD SE                 SA G QAPG++RY
Sbjct: 1036 DAVATSSRQKRRLAQTSGMTAGELEADDSETRSESISLGGRRKRRQISAPGTQAPGEKRY 1095

Query: 297  NLRRSTIAG---SSRAFSDQAKGHGEGDHV-------------GEGTPKDGANISPSS 172
            N RRSTIAG   +++   DQ K H  G H              GEGT K      PSS
Sbjct: 1096 NFRRSTIAGTVAAAQTMPDQTKEHKTGSHQQSTENEVLKGGSDGEGTSKRVPAAEPSS 1153


>ref|XP_009403930.1| PREDICTED: protein CROWDED NUCLEI 1 [Musa acuminata subsp.
            malaccensis]
          Length = 1250

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 19/174 (10%)
 Frame = -1

Query: 465  VANSRQKRHRPHTSEMTNSVLEA-DSEAHXXXXXXXXXXXXXXXSAIGVQAPGDRRYNLR 289
            + ++ QKR   H S    S L+  DSE                 +    Q PG++RYN R
Sbjct: 1032 LVHAGQKRGLTHISVAAASELDGEDSETRSESISLGGRRKRRQINIPETQTPGEKRYNFR 1091

Query: 288  RSTIAGSSRAFSDQAKGHGEGDHV-------------GEGTPKDGANISPSSCFXXXXXX 148
             STIA ++R+ SDQ KGH  G H              GEGT K   ++ P+S F      
Sbjct: 1092 HSTIAAAARSISDQTKGHKRGGHQQPSGDESLRGDGDGEGTSKLRLDVEPASSF------ 1145

Query: 147  XXXXXXXXXXVMLILQKCTTRNVMEVSS-----KREMVEVCVESDVIRSVENSE 1
                        + +QK    NV++V           +E C   D  +SVE S+
Sbjct: 1146 -----AAESLKSVDMQKMAAENVLDVQEIFQKPVSHEIEECHADDAGKSVEFSK 1194


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