BLASTX nr result
ID: Ophiopogon26_contig00020335
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00020335
(477 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK79326.1| uncharacterized protein A4U43_C01F5230 [Asparagus... 94 5e-20
ref|XP_020253112.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 94 1e-19
gb|ONK62778.1| uncharacterized protein A4U43_C07F8040 [Asparagus... 94 1e-19
ref|XP_020271643.1| mediator of RNA polymerase II transcription ... 94 1e-19
gb|PKA66960.1| Mediator of RNA polymerase II transcription subun... 69 2e-10
ref|XP_010921311.1| PREDICTED: mediator of RNA polymerase II tra... 68 3e-10
ref|XP_010921303.1| PREDICTED: mediator of RNA polymerase II tra... 68 3e-10
ref|XP_020576382.1| mediator of RNA polymerase II transcription ... 65 3e-09
ref|XP_023919928.1| mediator of RNA polymerase II transcription ... 64 7e-09
ref|XP_020695062.1| mediator of RNA polymerase II transcription ... 64 9e-09
ref|XP_008797329.1| PREDICTED: mediator of RNA polymerase II tra... 62 3e-08
ref|XP_020109939.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 59 3e-07
ref|XP_020086667.1| mediator of RNA polymerase II transcription ... 59 4e-07
ref|XP_020086661.1| mediator of RNA polymerase II transcription ... 59 5e-07
ref|XP_009391644.1| PREDICTED: mediator of RNA polymerase II tra... 59 5e-07
gb|OAY76204.1| Mediator of RNA polymerase II transcription subun... 59 5e-07
ref|XP_009391643.1| PREDICTED: mediator of RNA polymerase II tra... 59 5e-07
dbj|GAY32932.1| hypothetical protein CUMW_004790 [Citrus unshiu] 55 1e-06
ref|XP_024029749.1| mediator of RNA polymerase II transcription ... 56 4e-06
ref|XP_007027968.2| PREDICTED: mediator of RNA polymerase II tra... 56 4e-06
>gb|ONK79326.1| uncharacterized protein A4U43_C01F5230 [Asparagus officinalis]
Length = 335
Score = 94.4 bits (233), Expect = 5e-20
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLL+M+KS A+LLPPVQRPYQQTS TK + NQLSSSAK +SQDQTLAYHIGCSFDE
Sbjct: 217 RLLVMDKSSALLLPPVQRPYQQTSVTKLNPNQLSSSAKDLSQDQTLAYHIGCSFDE 272
>ref|XP_020253112.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 27-like [Asparagus officinalis]
Length = 409
Score = 94.4 bits (233), Expect = 1e-19
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLL+M+KS A+LLPPVQRPYQQTS TK + NQLSSSAK +SQDQTLAYHIGCSFDE
Sbjct: 352 RLLVMDKSSALLLPPVQRPYQQTSVTKLNPNQLSSSAKDLSQDQTLAYHIGCSFDE 407
>gb|ONK62778.1| uncharacterized protein A4U43_C07F8040 [Asparagus officinalis]
Length = 426
Score = 94.4 bits (233), Expect = 1e-19
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLL+M+KS A+LLPPVQRPYQQTS TK + NQLSSSAK +SQDQTLAYHIGCSFDE
Sbjct: 307 RLLVMDKSSALLLPPVQRPYQQTSVTKLNPNQLSSSAKDLSQDQTLAYHIGCSFDE 362
>ref|XP_020271643.1| mediator of RNA polymerase II transcription subunit 27-like
[Asparagus officinalis]
Length = 437
Score = 94.4 bits (233), Expect = 1e-19
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLL+M+KS A+LLPPVQRPYQQTS TK + NQLSSSAK +SQDQTLAYHIGCSFDE
Sbjct: 380 RLLVMDKSSALLLPPVQRPYQQTSVTKLNPNQLSSSAKDLSQDQTLAYHIGCSFDE 435
>gb|PKA66960.1| Mediator of RNA polymerase II transcription subunit 27 [Apostasia
shenzhenica]
Length = 426
Score = 68.6 bits (166), Expect = 2e-10
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLLMM+KSLA++LPPV R YQ TS TK NQL SS K S D AYHIGC+ D+
Sbjct: 370 RLLMMDKSLALVLPPVHRTYQITSATKTSPNQLPSSDKSQSCDFIFAYHIGCAADD 425
>ref|XP_010921311.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X2 [Elaeis guineensis]
Length = 405
Score = 67.8 bits (164), Expect = 3e-10
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3
Query: 6 LLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCS 161
LLMM+KSLA+LLPPV+RPY+QT T F+ +QL+ SAK + D AYHIGCS
Sbjct: 351 LLMMDKSLALLLPPVRRPYRQTCTTNFNQSQLTPSAKVQNVDLNSAYHIGCS 402
>ref|XP_010921303.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921305.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921306.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921307.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921308.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921309.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_010921310.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
ref|XP_019706431.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Elaeis guineensis]
Length = 425
Score = 67.8 bits (164), Expect = 3e-10
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3
Query: 6 LLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCS 161
LLMM+KSLA+LLPPV+RPY+QT T F+ +QL+ SAK + D AYHIGCS
Sbjct: 371 LLMMDKSLALLLPPVRRPYRQTCTTNFNQSQLTPSAKVQNVDLNSAYHIGCS 422
>ref|XP_020576382.1| mediator of RNA polymerase II transcription subunit 27
[Phalaenopsis equestris]
Length = 393
Score = 65.1 bits (157), Expect = 3e-09
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDEA 173
RLL+M++SLA++LPPV+R Y+ S +K+ NQL+SS G D AYHIGCS D++
Sbjct: 337 RLLVMDESLALILPPVRRSYRNASASKYCRNQLASSDMGYGCDFVFAYHIGCSVDDS 393
>ref|XP_023919928.1| mediator of RNA polymerase II transcription subunit 27 [Quercus
suber]
Length = 458
Score = 63.9 bits (154), Expect = 7e-09
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDEA 173
RLL M+K ++LLPPV RPY+Q S K + QL SSAK S D + AYH+GC +EA
Sbjct: 402 RLLSMDKKSSLLLPPVHRPYRQFSALKISSPQLISSAKDTSSDLSQAYHVGCFSEEA 458
>ref|XP_020695062.1| mediator of RNA polymerase II transcription subunit 27 [Dendrobium
catenatum]
ref|XP_020695063.1| mediator of RNA polymerase II transcription subunit 27 [Dendrobium
catenatum]
ref|XP_020695064.1| mediator of RNA polymerase II transcription subunit 27 [Dendrobium
catenatum]
Length = 428
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCS 161
RLLMM++SLA++LPPV R YQ TS + NQL++S +G D AYHIGCS
Sbjct: 372 RLLMMDESLALILPPVHRAYQNTSASNSHPNQLTASDRGHGSDFIFAYHIGCS 424
>ref|XP_008797329.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Phoenix dactylifera]
ref|XP_008797330.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Phoenix dactylifera]
Length = 425
Score = 62.0 bits (149), Expect = 3e-08
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +3
Query: 6 LLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCS 161
LL+M+KSLA+LLPPV RPY+QT T F+ + + SAK + D AYHIGCS
Sbjct: 371 LLLMDKSLALLLPPVHRPYRQTCTTNFNQSHSTPSAKVQNVDLNSAYHIGCS 422
>ref|XP_020109939.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 27-like [Ananas comosus]
Length = 320
Score = 58.9 bits (141), Expect = 3e-07
Identities = 33/56 (58%), Positives = 36/56 (64%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLLMM+K LA LLPPV RPY QT SSA+G S D T AYHIGCS +E
Sbjct: 275 RLLMMDKMLAFLLPPVHRPYFQT-----------SSAEGQSSDLTKAYHIGCSSEE 319
>ref|XP_020086667.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X2 [Ananas comosus]
Length = 288
Score = 58.5 bits (140), Expect = 4e-07
Identities = 32/56 (57%), Positives = 37/56 (66%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLLMM+K+LA+LLPPV RPY L+SS KG S D T AYHIGCS +E
Sbjct: 243 RLLMMDKTLALLLPPVHRPY-----------FLTSSVKGQSSDLTKAYHIGCSSEE 287
>ref|XP_020086661.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X1 [Ananas comosus]
ref|XP_020086662.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X1 [Ananas comosus]
ref|XP_020086663.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X1 [Ananas comosus]
ref|XP_020086664.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X1 [Ananas comosus]
ref|XP_020086665.1| mediator of RNA polymerase II transcription subunit 27-like isoform
X1 [Ananas comosus]
Length = 371
Score = 58.5 bits (140), Expect = 5e-07
Identities = 32/56 (57%), Positives = 37/56 (66%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLLMM+K+LA+LLPPV RPY L+SS KG S D T AYHIGCS +E
Sbjct: 326 RLLMMDKTLALLLPPVHRPY-----------FLTSSVKGQSSDLTKAYHIGCSSEE 370
>ref|XP_009391644.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 429
Score = 58.5 bits (140), Expect = 5e-07
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLL+M+KSLA+LLPPV R YQ+T+ T + + K D AYHIGCS D+
Sbjct: 373 RLLVMDKSLALLLPPVHRAYQETTTTVSSQTESTPPTKAAHPDHISAYHIGCSADD 428
>gb|OAY76204.1| Mediator of RNA polymerase II transcription subunit 27 [Ananas
comosus]
Length = 441
Score = 58.5 bits (140), Expect = 5e-07
Identities = 32/56 (57%), Positives = 37/56 (66%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLLMM+K+LA+LLPPV RPY L+SS KG S D T AYHIGCS +E
Sbjct: 396 RLLMMDKTLALLLPPVHRPY-----------FLTSSVKGQSSDLTKAYHIGCSSEE 440
>ref|XP_009391643.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 449
Score = 58.5 bits (140), Expect = 5e-07
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDE 170
RLL+M+KSLA+LLPPV R YQ+T+ T + + K D AYHIGCS D+
Sbjct: 393 RLLVMDKSLALLLPPVHRAYQETTTTVSSQTESTPPTKAAHPDHISAYHIGCSADD 448
>dbj|GAY32932.1| hypothetical protein CUMW_004790 [Citrus unshiu]
Length = 121
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/57 (50%), Positives = 35/57 (61%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDEA 173
RLL M+K LA+LLPPV RPY+ T + QL SS S D AYHIGC ++A
Sbjct: 64 RLLAMDKRLALLLPPVSRPYRHFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 120
>ref|XP_024029749.1| mediator of RNA polymerase II transcription subunit 27 [Morus
notabilis]
ref|XP_024029750.1| mediator of RNA polymerase II transcription subunit 27 [Morus
notabilis]
Length = 427
Score = 55.8 bits (133), Expect = 4e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGC 158
RLL M++ L +LLPP+ RPYQQ S K + Q ++S K S + AYHIGC
Sbjct: 371 RLLAMDRQLGLLLPPIYRPYQQFSAFKVSSTQPNTSVKDQSSNLARAYHIGC 422
>ref|XP_007027968.2| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Theobroma cacao]
Length = 429
Score = 55.8 bits (133), Expect = 4e-06
Identities = 29/57 (50%), Positives = 35/57 (61%)
Frame = +3
Query: 3 RLLMMEKSLAVLLPPVQRPYQQTSGTKFDANQLSSSAKGVSQDQTLAYHIGCSFDEA 173
RLL MEK A+LLPPV RPY+ S +K + Q +S S+ AYHIGC DEA
Sbjct: 373 RLLAMEKQSALLLPPVHRPYRTFSPSKVSSTQAIASTGDQSRSAPRAYHIGCFSDEA 429